Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E07
         (567 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          25   0.45 
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 382 LFPSTNTNWSPPVSHRQHRRVAPRWRPSLLK 290
           L  S   +WSP  + +Q+  +  RW+  L K
Sbjct: 423 LLTSALASWSPLTNPKQYMEIFARWKDILEK 453


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 383 TYTLLRKKILISNLSSIYRC 442
           T  L+  K + S+LSS+Y C
Sbjct: 227 TLILILAKCITSSLSSLYTC 246


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 190 TLCHRV*ATCHGHTALCPAYFH 125
           T+  R+   CHG+   CP   H
Sbjct: 340 TMYFRMPHRCHGNLQSCPTRSH 361


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -2

Query: 491 NSTLKNVTNACMKSLRRTCRWNLDSKLRSS 402
           NS   +  +A   SLR   RW+L +  RS+
Sbjct: 348 NSASNSSGDAQSTSLRPFSRWSLCNSARSN 377


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,019
Number of Sequences: 336
Number of extensions: 3169
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)