Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E07
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransfer... 227 7e-61
SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine N-methy... 123 2e-29
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 31 0.089
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 31 0.16
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.36
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 0.63
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 29 0.63
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 28 1.1
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 27 2.5
SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|... 27 2.5
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 4.4
SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase Pin1|Schi... 25 5.9
SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyc... 25 5.9
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 25 5.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 7.7
SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein |Schizosacch... 25 7.7
SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13 |Schizosa... 25 7.7
>SPAC890.07c |rmt1|prmt1|type I protein arginine N-methyltransferase
Rmt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 339
Score = 227 bits (556), Expect = 7e-61
Identities = 105/185 (56%), Positives = 127/185 (68%)
Frame = +1
Query: 13 NRLSDXXXXXXXXXXXXXLPAEKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMF 192
N+LSD LP EKVDII+SEWMGY L YESMLDTVL ARD++L PDG++F
Sbjct: 99 NKLSDRITLIQGKMEEIQLPVEKVDIIVSEWMGYFLLYESMLDTVLVARDRYLAPDGLLF 158
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVYGFDMSSIRKVAISEPLVDVVDAKQVVTNSCLL 372
PDR + + IED YK EKI +WDDVYGFD S I+K EPLVD VD V TNSC++
Sbjct: 159 PDRAQIQLAAIEDADYKSEKIGFWDDVYGFDFSPIKKDVWKEPLVDTVDRIAVNTNSCVI 218
Query: 373 KEIDLYTVKKEDLNFESKFHLQVRRNDFIQALVTFFNVEFMKSHKRLGFSTAPEAPYTHW 552
++DL TVKKEDL F S F + RNDF+ A + +F++EF HK + FST P + YTHW
Sbjct: 219 LDLDLKTVKKEDLAFSSPFEITATRNDFVHAFLAWFDIEFSACHKPIKFSTGPFSRYTHW 278
Query: 553 KQTVF 567
KQTVF
Sbjct: 279 KQTVF 283
>SPBC8D2.10c |rmt3|rmt3|type I ribosomal protein arginine
N-methytransferase Rmt3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 543
Score = 123 bits (296), Expect = 2e-29
Identities = 67/193 (34%), Positives = 97/193 (50%), Gaps = 9/193 (4%)
Frame = +1
Query: 13 NRLSDXXXXXXXXXXXXXLPAEKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMF 192
N L+D LP KVDIIISEWMGY L +ESM+D+VL ARD++L P GIM
Sbjct: 300 NGLADQITFIRGKIEDISLPVGKVDIIISEWMGYALTFESMIDSVLVARDRFLAPSGIMA 359
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVYGFDMSSIRKVAISEPLVDVVDAKQVVTNSCLL 372
P L + + + +E I++W DVYGF M+ ++ + V VV V +
Sbjct: 360 PSETRLVLTATTNTELLEEPIDFWSDVYGFKMNGMKDASYKGVSVQVVPQTYVNAKPVVF 419
Query: 373 KEIDLYTVKKEDLNFESKFHLQVRRNDFIQALVTFFNVEFMKSH---------KRLGFST 525
+++T K +D++F S F L + + A +F+ F + GF+T
Sbjct: 420 ARFNMHTCKVQDVSFTSPFSLIIDNEGPLCAFTLWFDTYFTTKRTQPIPEAIDEACGFTT 479
Query: 526 APEAPYTHWKQTV 564
P+ THWKQ V
Sbjct: 480 GPQGTPTHWKQCV 492
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 31.5 bits (68), Expect = 0.089
Identities = 47/131 (35%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Frame = -2
Query: 338 STTSTSGSEMATFLIEDMSK-PYTSSH---QLIFSS-----LY*RSSIPQMNRVHLSGNI 186
ST+S SE+++ L+ S P TSS I SS L SSIP + S +I
Sbjct: 498 STSSEVVSEVSSTLLSGSSAIPSTSSSTPSSSIISSPMTSVLSSSSSIPTSSSSDFSSSI 557
Query: 185 --MPSGLSHLS--RAYSTVSSILS*NKQ*P------IHSDIIMSTF-SAGNSTSSTFPLT 39
+ SG+S S +S+VSSILS + P I S STF SA S+ S+ +
Sbjct: 558 TTISSGISSSSIPSTFSSVSSILSSSTSSPSSTSLSISSSSTSSTFSSASTSSPSSISSS 617
Query: 38 ISMTSLSLFAP 6
IS +S L +P
Sbjct: 618 ISSSSTILSSP 628
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 30.7 bits (66), Expect = 0.16
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2
Query: 407 SSFLTVYKSISFNKHELVTTCFASTTSTSGSEMAT 303
SS LT SI H++VTT F TT T GS++ T
Sbjct: 381 SSILTNSGSIKSGDHQIVTTSFVQTT-THGSQVET 414
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 29.5 bits (63), Expect = 0.36
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Frame = -2
Query: 359 LVTTCFASTTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY*RSSIPQMNRVHLSGNIMP 180
L ++ AS TS+S S + + +SS + SSL SS+P + + S ++
Sbjct: 106 LTSSSSASPTSSSSSHALSSSSSSLVAS-SSSSGMSSSSLSHSSSVPSSSSSYHSSSMTT 164
Query: 179 SGLSH----LSRAYSTVSSILS*NKQ*PIHSDIIMSTFSAGNSTSSTFPLTISMTSLS 18
SGLS +S Y SI++ + S+++ T + ++SS+F + S T +S
Sbjct: 165 SGLSSSASIVSSTYRDGPSIITLVSTSYV-SEVVTPTTTNNWNSSSSFTSSTSSTPIS 221
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.7 bits (61), Expect = 0.63
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 5/135 (3%)
Frame = -2
Query: 407 SSFLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIEDMSKPYTSSHQ-LIFSSLY*R 231
SS + S S L ++ STTS + + + S P TSS+ +S
Sbjct: 211 SSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTSSNSTTAATSASAT 270
Query: 230 SSIPQMNRVHLSGNIMPSGLSHLSRAYSTVSSILS*NKQ*PIHSDIIMST----FSAGNS 63
SS Q N L + PS + LS A ST ++ S ++S S S+ +S
Sbjct: 271 SSSAQYNTSSLLPSSTPSS-TPLSSANSTTATSASSTPLTSVNSTTTTSASSTPLSSVSS 329
Query: 62 TSSTFPLTISMTSLS 18
+ST + S T LS
Sbjct: 330 ANSTTATSTSSTPLS 344
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 28.7 bits (61), Expect = 0.63
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 530 GAVLKPSRLCDFMNSTLKNVTNA 462
G V K ++CDF+ ST+ N +N+
Sbjct: 310 GQVWKSQKICDFLKSTIGNTSNS 332
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 27.9 bits (59), Expect = 1.1
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +1
Query: 151 YARDKWLKPDGIMFPDRCTLFICGIEDRQYKDEKINWWDDVYGFDMSSIRKV---AISEP 321
+ R W+ I P + ++C E ++Y ++ NW V S++ V IS P
Sbjct: 135 FYRGYWMGV-AIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICSALGTVVATTISTP 193
Query: 322 LVDVVDAKQVVTNSCLLK 375
L V QV T+S + K
Sbjct: 194 LDIVKTRYQVATSSAMRK 211
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 26.6 bits (56), Expect = 2.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 5 EEQIDSVMSSK*LRERLKK*SYQRKKWT*LYQSGWATACFMKVCWTQCCMPVTSGLNPM 181
+++I S + K L +R+K +Y+ K W Q W T M C T +PV P+
Sbjct: 406 QQKIVSYLEEKKLAKRVK--NYRLKDWLISRQRFWGTPIPMVHCETCGAVPVPESELPV 462
>SPCC777.04 |||amino acid transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 110 PIHSDIIMSTFSAGNSTSSTFPLTISMTSLSL 15
P SDI+ S S GN+ +S F + I + + +
Sbjct: 301 PYDSDILSSNASKGNAAASPFVVAIKLAQIKV 332
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 25.8 bits (54), Expect = 4.4
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = -2
Query: 335 TTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY*RSSIPQMNR---VHLSGNIMPSGLSH 165
T STS S T ++ S Y+S + ++ SS+ N H+S +I+ SG S
Sbjct: 528 TISTSLSSFPTTIVSS-SFQYSSLSSNVTTTNAQSSSLSSSNSSALTHISSSIVSSGSSS 586
Query: 164 LSRAYSTVSSILS*NKQ*PIHSDIIMSTFSAGNSTSSTFPLTISMTSLSL 15
+ + VSSI S S + +S+ S+ SS++ +T + TS S+
Sbjct: 587 ALSSSTIVSSINS-------SSSVFISSVSSSLQYSSSY-VTETTTSGSV 628
>SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase
Pin1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 175
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -2
Query: 416 KLRSSFLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIEDMSKPY 273
KL + + KS S + H+L +++ G E+ F ++M KP+
Sbjct: 99 KLAEHYEQLLKSGSVSMHDLAMKESDCSSARRGGELGEFGRDEMQKPF 146
>SPBP8B7.11 |nxt3||ubiquitin protease cofactor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 434
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -2
Query: 368 KHELVTTCFASTTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY*RSSIPQMNRVHL 198
K + + ASTT + + + + PYT S++L+ +S++ ++ P+ + V L
Sbjct: 275 KSQASVSSTASTTGQTVKGVNADQTQQPTAPYTQSNELLETSVFVKNIPPETSDVSL 331
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 86 STFSAGNSTSSTFPLTISMTSLSLFAPR 3
S + A NSTSST + + SLF PR
Sbjct: 37 SLYDANNSTSSTSSQKPNTSFTSLFGPR 64
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 7.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 62 TSSTFPLTISMTSLSLFAP 6
TS++ P+T+S +SLS F P
Sbjct: 251 TSTSTPVTVSSSSLSSFTP 269
>SPAC18B11.11 ||SPAC1F5.01|GTPase activating protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1294
Score = 25.0 bits (52), Expect = 7.7
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = -2
Query: 485 TLKNVTNACMKSLRRTCRWNLDS--KLRSSFLTVY--KSISFNKHELVTTCFASTTSTSG 318
T++++ C+K +R T + LD KL + V+ +SF+ + +++ F +T
Sbjct: 856 TIQSICLFCLKVIR-TKKEELDGHKKLVNPNTKVFCLYLVSFS-YSIISNLFLGCETTER 913
Query: 317 SEMATFLIEDMSKPYTSSH 261
+++A+FL+++ SH
Sbjct: 914 AQLASFLLKEFLNLKNGSH 932
>SPAC1805.03c |trm13||tRNA 2'-O-methyltransferase Trm13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 407
Score = 25.0 bits (52), Expect = 7.7
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 335 TTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY*RSSIPQ 216
+TST SE ++F I D+SK S +F+ + PQ
Sbjct: 96 STSTDASESSSFEIVDLSKEELSKWICLFNRISDSLPTPQ 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,337,905
Number of Sequences: 5004
Number of extensions: 48936
Number of successful extensions: 168
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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