Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E07
(567 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 134 6e-32
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 123 1e-28
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 114 1e-27
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 87 9e-18
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 75 4e-14
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208... 33 0.21
07_03_0755 - 21261855-21261945,21262277-21262323,21262819-212630... 32 0.28
05_04_0085 + 17790417-17790714,17791826-17791869,17793658-177937... 30 1.1
12_02_0504 - 19771191-19772134,19772210-19774892 29 2.0
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 29 3.4
12_02_0502 - 19746100-19746185,19746745-19750474 28 6.0
04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541 28 6.0
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 27 7.9
05_04_0177 + 18770409-18770897 27 7.9
04_03_0057 + 10407402-10407452,10407540-10407782,10408506-104089... 27 7.9
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888... 27 7.9
02_01_0795 + 5959896-5960061,5960415-5960700,5961664-5961790 27 7.9
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 134 bits (323), Expect = 6e-32
Identities = 70/181 (38%), Positives = 106/181 (58%), Gaps = 14/181 (7%)
Frame = +1
Query: 67 LPAEKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFICGIEDRQYKD 246
+P+ K D+++SEWMGYCL YESML +VLYARD +LKP G + PD T+F G
Sbjct: 372 VPSNKFDVLVSEWMGYCLLYESMLSSVLYARDHFLKPGGAILPDTATIFGAGFGK---GG 428
Query: 247 EKINWWDDVYGFDMSSIRKVAISE----PLVDVVDAKQVVTNSCLLKEIDLYTVKKEDLN 414
+ +W++VYGFDMS I K P+VD++ ++ +VT + +L DL T+K+ +++
Sbjct: 429 TSLPFWENVYGFDMSCIGKEVTGNSARFPVVDILASEDIVTETAVLNSFDLATMKENEMD 488
Query: 415 FESKFHLQVRRNDFIQALVT-------FFNVEFMK---SHKRLGFSTAPEAPYTHWKQTV 564
F S F L++ + Q+ VT +F+ F K + ST+P + THW QT+
Sbjct: 489 FTSSFELRLSESGVSQSGVTWCYGIILWFDTGFTNRFCKEKPVNLSTSPFSTPTHWSQTI 548
Query: 565 F 567
F
Sbjct: 549 F 549
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 123 bits (296), Expect = 1e-28
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 30/193 (15%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFICGIEDRQYKDEKI 255
+KVD+IISEWMGY L YESML +VL+ARDKWLKP G++ P TLF+ I + + + +
Sbjct: 148 DKVDVIISEWMGYMLLYESMLPSVLFARDKWLKPGGLILPSHATLFMAPITNSERYEGSV 207
Query: 256 NWWDDVYGFDMSSI----RKVAISEPLVDVVDAKQVVTNSCLLKEIDLYTVKKEDL-NFE 420
++W DVYG +MS++ +K EP ++++ + V++ ++K ID YT K E+L +F
Sbjct: 208 DFWSDVYGINMSALVPLAKKFTSEEPSIEIIGGENVLSWPFVVKHIDCYTFKAEELKSFT 267
Query: 421 SKFHLQVRRNDFIQALVTFFNVEF-------------------MKSHKRLG------FST 525
+K+ + I +F VEF ++ +R G ST
Sbjct: 268 TKYKVSSMMLAPIHGFGLWFEVEFNGPSNPTDKSPSDLNPLDVIRKKRRRGSEDPVVLST 327
Query: 526 APEAPYTHWKQTV 564
APE THW QT+
Sbjct: 328 APEDEPTHWHQTI 340
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 114 bits (274), Expect(2) = 1e-27
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 5/144 (3%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFICGIEDRQYKDEKI 255
EKVD+IISEWMGY L YESML +V++ARDKWLKP G++ P +L++ I + + +
Sbjct: 156 EKVDVIISEWMGYMLLYESMLGSVIFARDKWLKPGGLILPSHASLYLAPITNSHRYQDSV 215
Query: 256 NWWDDVYGFDMSSI----RKVAISEPLVDVVDAKQVVTNSCLLKEIDLYTVKKEDL-NFE 420
+W DVYG MSS+ ++ A EP V+ + + V+T ++ ++D YT++ +L
Sbjct: 216 YFWQDVYGIKMSSMMPLAKQCAFMEPSVETISGENVLTWPSVVAQVDCYTIQAPELETIT 275
Query: 421 SKFHLQVRRNDFIQALVTFFNVEF 492
+ F+ + +F+VEF
Sbjct: 276 ATFNYTSMLQAPLHGFAFWFDVEF 299
Score = 26.6 bits (56), Expect(2) = 1e-27
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 496 KSHKRLGFSTAPEAPYTHWKQTV 564
K+ + STAPE THW+QT+
Sbjct: 330 KADAPIVLSTAPEDAPTHWQQTL 352
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 87.0 bits (206), Expect = 9e-18
Identities = 66/215 (30%), Positives = 109/215 (50%), Gaps = 29/215 (13%)
Frame = +1
Query: 10 ANRLSDXXXXXXXXXXXXXLPAEKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIM 189
AN ++D LP EKVD+IISEWMGY L ESM D+V+ ARD+WLKPDG+M
Sbjct: 111 ANDVADIVEVIQGSMEDVVLP-EKVDVIISEWMGYFLLRESMFDSVICARDRWLKPDGVM 169
Query: 190 FPDRCTLFICGIE----DRQYKDEKI---NW------WDDVYGFDMSSIRKVAISE---- 318
+P +++ I + + +D +I +W + YG +M+ + K +E
Sbjct: 170 YPSHARMWLAPIRSDLAENKMEDLEIAMHDWNLFVEDTESYYGVNMNVLTKAYRAEHEKY 229
Query: 319 ----PLVDVVDAKQVVTNSCLLKEIDLYTVKKEDL-NFESKFHLQVRRN-DFIQALVTFF 480
+ + + QV+ + ++KEID T +++ ++ + ++ + + AL +F
Sbjct: 230 YLKSAIWNNLHPNQVIGQAAVIKEIDCLTATVDEIREVRAQVTMPIKLDMTRLAALAGWF 289
Query: 481 NVEFMKSH-----KRLGFSTAPEA-PYTHWKQTVF 567
+V F S + + STAP+ THW Q VF
Sbjct: 290 DVHFRGSKQNPATQEVELSTAPDVNGGTHWGQQVF 324
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 74.9 bits (176), Expect = 4e-14
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFICGIEDRQYKDEKI 255
EK DI+ISE MG L E ML++ + ARD++L P G MFP + + D E
Sbjct: 272 EKADILISEPMGTLLVNERMLESYVIARDRFLVPGGKMFPTTGRIHMAPFSDEYLYVEMA 331
Query: 256 N---WWD--DVYGFDMSSIRKVA----ISEPLVDVVDAKQVVTNSCLLKEIDLYTVKKED 408
N +W + +G D++ + A S+P+VD D + +V+ +D T+K+E+
Sbjct: 332 NKALFWQQHNFFGVDLTPLHGSAFQGYFSQPVVDAFDPRLLVSPP-TFHTLDFTTMKEEE 390
Query: 409 L-NFESKFHLQVRRNDFIQALVTFFNVEFMKSHKRLGFSTAPEAPYTHWKQ 558
L + + + L +F+V F S + +TAP +P THW Q
Sbjct: 391 LYEIDIPLNFVASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQ 441
>02_01_0312 -
2082614-2082677,2082815-2082945,2083041-2083129,
2083223-2083292,2083429-2083509,2083768-2083821,
2084864-2085067,2086272-2086366,2086976-2086997,
2087492-2087585,2087677-2087764,2087874-2087979,
2088103-2088189,2088261-2088309,2088418-2088521,
2088605-2088697,2088900-2088974,2089316-2089384,
2090182-2090250,2090339-2090374,2090471-2090565,
2090836-2090911,2091067-2091153,2091287-2091355,
2091654-2091731,2091836-2091925,2092436-2092642,
2092736-2092879
Length = 841
Score = 32.7 bits (71), Expect = 0.21
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDT-VLYARDKWLKPDGIMFPDRCTLFI 216
EK DI++SE +G F ++ L L ++LKPDGI P T FI
Sbjct: 391 EKADILVSELLGS--FGDNELSPECLDGAQRFLKPDGISIPSSYTSFI 436
>07_03_0755 -
21261855-21261945,21262277-21262323,21262819-21263014,
21263239-21263340,21263602-21263678,21264037-21264236,
21264324-21264681,21265245-21265301,21265434-21266192,
21266287-21266468,21266651-21266813
Length = 743
Score = 32.3 bits (70), Expect = 0.28
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 376 PSTNTNWSPPVSHRQHRRVAPRWRP 302
PSTN WSPPV+ V W P
Sbjct: 175 PSTNNGWSPPVAQPADEHVRSSWAP 199
>05_04_0085 +
17790417-17790714,17791826-17791869,17793658-17793793,
17794315-17794391,17794646-17794706,17794707-17794924,
17795168-17795412,17796032-17796401,17796916-17797344
Length = 625
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -3
Query: 358 WSPPVSHRQHRRVAPRWRPSLLKTCRNHIHRPTS*SSRPYTDGPRYH 218
WS P+ HR +APR P L R+H+ + + DG RY+
Sbjct: 73 WSRPLPLGCHR-IAPRVLPLLWNAVRDHVLKEMNRGGNQPVDGRRYY 118
>12_02_0504 - 19771191-19772134,19772210-19774892
Length = 1208
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -2
Query: 488 STLKNVTNACMKSLR-----RTCRWNLDSKLRSSFLTVYKSISFNKH 363
S L N+T C SLR R C+ ++D K++ + S+S+NK+
Sbjct: 702 SVLSNLTGLCRLSLRNLQNVRNCKESMDIKIKDMRQMRFLSLSWNKY 748
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 404 SFLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY*RS 228
SF VYK+ +HE++T S + LI+ +S+P S L F + + +S
Sbjct: 1173 SFTDVYKNSDLYQHEVLTKSLDSYGIVAHCRRNQSLIKGISRPPQGSKDLFFPTQFSQS 1231
>12_02_0502 - 19746100-19746185,19746745-19750474
Length = 1271
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 488 STLKNVTNACMKSLR--RTCRWNLDSKLRSSFLTVYKSISFNKH 363
STL N+ +++L+ R C+ ++ KL+ ++ S+S+NKH
Sbjct: 735 STLTNLKRLSLRNLQNVRNCKDAMEIKLKDKPDMMFLSLSWNKH 778
>04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541
Length = 452
Score = 27.9 bits (59), Expect = 6.0
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 8 EQIDSVMSSK*LRERLKK*SYQRKKWT*LYQSGWATACFMKVCWTQCCMPVTSG 169
E I + +SK +E LK+ QR ++ +G T KV WT+ C+P + G
Sbjct: 69 EPIYLLTASKVTKESLKQLDKQRHRFL-WAGTGDITGGKCKVNWTKTCLPTSQG 121
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 331 VVDAKQVVTNSCLLKEIDLYTVKKEDLNFESKFHLQVRRNDFIQALVTFFNVEFMKSH 504
V+D QVV ++ + + KE + K+ L VR + L+ V+F++SH
Sbjct: 360 VIDDAQVVQAFKVIDDAQVVQASKEIMTDRQKYELSVRLQSY-GGLIPNHVVDFIRSH 416
>05_04_0177 + 18770409-18770897
Length = 162
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -3
Query: 355 SPPVSHRQHRRVAPRWRPSLLKTCRNHIHRPTS*SSRP 242
S P SHR HR PSL+ RNH P + S P
Sbjct: 118 SAPTSHRDHRP------PSLMNRHRNHHQAPVADESPP 149
>04_03_0057 +
10407402-10407452,10407540-10407782,10408506-10408976,
10409058-10409483,10409559-10409618,10409694-10409807,
10409888-10409956
Length = 477
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = -2
Query: 413 LRSSFLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIEDMSKPYTSSHQLIFSSLY* 234
LR S+ YK +S +K + F S + A F ED++ + +FS+
Sbjct: 82 LRKSWAVWYKCVSASKQKDARVWFPYEDSVNLDLPADFRFEDLNSEKFDKSREVFSAAIS 141
Query: 233 RSSIPQMNRVHLSGNIMPS 177
+P +H GNI S
Sbjct: 142 PCILPV--GIHQGGNIQVS 158
>04_02_0031 +
8874025-8874180,8882152-8882550,8882651-8882987,
8883234-8884060
Length = 572
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 279 FRHVFNKEGRHLGATRRCCRCETGGDQFVFVEGNRLIHC 395
F+ N+ HLG T + R + GG+ GN L C
Sbjct: 474 FKKFQNEVQNHLGKTTKYLRSDCGGEYLSLEFGNHLKKC 512
>02_01_0795 + 5959896-5960061,5960415-5960700,5961664-5961790
Length = 192
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 211 FICGI-EDRQYKDEKINWWD 267
F CG+ R Y DEK++W+D
Sbjct: 71 FFCGVGSSRIYLDEKVDWFD 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,121
Number of Sequences: 37544
Number of extensions: 311610
Number of successful extensions: 959
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1305140760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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