Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E07
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 266 6e-72
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr... 29 3.1
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l... 29 3.1
U88184-12|AAM98020.1| 570|Caenorhabditis elegans Hypothetical p... 28 4.1
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 5.4
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 5.4
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 5.4
Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical p... 27 7.1
Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical p... 27 7.1
AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical... 27 7.1
Z54216-4|CAA90947.1| 421|Caenorhabditis elegans Hypothetical pr... 27 9.4
U88184-14|AAK31520.1| 821|Caenorhabditis elegans Hypothetical p... 27 9.4
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 266 bits (653), Expect = 6e-72
Identities = 115/164 (70%), Positives = 139/164 (84%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFICGIEDRQYKDEKI 255
EKVDIIISEWMGYCLFYESML+TVL ARD+WL P+G++FPD+ L++C IEDRQYK++KI
Sbjct: 131 EKVDIIISEWMGYCLFYESMLNTVLVARDRWLAPNGMLFPDKARLYVCAIEDRQYKEDKI 190
Query: 256 NWWDDVYGFDMSSIRKVAISEPLVDVVDAKQVVTNSCLLKEIDLYTVKKEDLNFESKFHL 435
+WWD VYGF+MS+I+ VAI EPLVD+VD QV TN+CLLK++DLYTVK EDL F+S F L
Sbjct: 191 HWWDSVYGFNMSAIKNVAIKEPLVDIVDNAQVNTNNCLLKDVDLYTVKIEDLTFKSDFKL 250
Query: 436 QVRRNDFIQALVTFFNVEFMKSHKRLGFSTAPEAPYTHWKQTVF 567
+ R+D+IQA VTFF VEF K HK+ GFST P+ YTHWKQTVF
Sbjct: 251 RCTRSDYIQAFVTFFTVEFSKCHKKTGFSTGPDVQYTHWKQTVF 294
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = +1
Query: 76 EKVDIIISEWMGYCLFYESMLDTVLYARDKWLKPDGIMFPDRCTLFI 216
EK DI++SE + C+F E +++T L A ++ I P + T+++
Sbjct: 231 EKADIVVSETLDCCVFGEKIVETFLDAHVRFSHDRTIFIPHQATVYV 277
>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
protein B0457.1b protein.
Length = 1012
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -2
Query: 446 RRTCRWNLDSKLRSS---FLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIED 288
++TCR+ +D+ L ++ Y + HE TT +TTST+ ++ + + E+
Sbjct: 103 KQTCRFFVDTFLFDDACPMMSKYLEVQHECHEATTTTTTTTTSTTTTDSSLIVDEE 158
>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
protein LAT-1B protein.
Length = 1012
Score = 28.7 bits (61), Expect = 3.1
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -2
Query: 446 RRTCRWNLDSKLRSS---FLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIED 288
++TCR+ +D+ L ++ Y + HE TT +TTST+ ++ + + E+
Sbjct: 103 KQTCRFFVDTFLFDDACPMMSKYLEVQHECHEATTTTTTTTTSTTTTDSSLIVDEE 158
>U88184-12|AAM98020.1| 570|Caenorhabditis elegans Hypothetical
protein F36H5.2b protein.
Length = 570
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -2
Query: 431 WNLDSKLRSSFLTVY----KSISFNKHELVTTCFASTTSTSGSEM 309
W ++ K S FL ++ ++ +F+ H++ T C+ + ST+G +
Sbjct: 76 WRIELKRVSGFLEIHLHCGENATFDYHKIETDCWFNLVSTNGKHL 120
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 360
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
protein ZK662.4 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 360
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 360
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 360
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 193 PDRCTLFICGIEDRQYKDEKINWWDDVY-GFDMSSIRKVAISEPLVDVVDAKQVVTN 360
P T+ ICG ED +Y I++++D+Y + +RK+ ++E +D+ ++TN
Sbjct: 136 PLSVTIDICGDEDEKYLAFSIHYFEDLYERKNAIYLRKLLLTE-----LDSNSLLTN 187
>Z67881-3|CAD44099.1| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 370 TNTNWSPPVSHRQHRRVAPRWRPSLLKTCRNHIHRPTS*SSRPYT 236
TN N+S VS R + P W L+ R PTS S P T
Sbjct: 248 TNANYSSLVSRANLRLLRPPWYEDLINPQRVSNSVPTSSMSLPST 292
>Z50797-11|CAA90676.2| 1405|Caenorhabditis elegans Hypothetical
protein T22H6.6a protein.
Length = 1405
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 370 TNTNWSPPVSHRQHRRVAPRWRPSLLKTCRNHIHRPTS*SSRPYT 236
TN N+S VS R + P W L+ R PTS S P T
Sbjct: 248 TNANYSSLVSRANLRLLRPPWYEDLINPQRVSNSVPTSSMSLPST 292
>Z22176-11|CAA80141.1| 784|Caenorhabditis elegans Hypothetical
protein ZK1098.3 protein.
Length = 784
Score = 27.5 bits (58), Expect = 7.1
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 286 MSSIRKVAISEPLVDVVDAKQVVTNSCLLKEIDLYTVKKEDLNFESKFHLQVRRNDFIQA 465
M ++ + + +V+VV K + LL E + TVKKE + + K + N+F Q
Sbjct: 603 MDAVAVFEVFQKIVEVV-RKHELDAEKLLVESHMITVKKEKVRRDCKNISLIPWNEFYQI 661
Query: 466 LVTFFNVE 489
+ T N E
Sbjct: 662 IHTHRNPE 669
>AC024791-10|ABM74563.1| 1736|Caenorhabditis elegans Hypothetical
protein Y47G6A.17 protein.
Length = 1736
Score = 27.5 bits (58), Expect = 7.1
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +1
Query: 382 DLYTVKKEDLNFESKFHLQVRRNDFI--QALVTFFNVEFMKSHKRLGFST 525
++ ++KKE+L E + ++++ + + Q LV NVE + +RLG +T
Sbjct: 645 EIQSLKKENLMIEERTLEELKQTESVELQRLVESINVEGSEMERRLGEAT 694
>Z54216-4|CAA90947.1| 421|Caenorhabditis elegans Hypothetical
protein T24H10.5 protein.
Length = 421
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/66 (19%), Positives = 27/66 (40%)
Frame = -2
Query: 449 LRRTCRWNLDSKLRSSFLTVYKSISFNKHELVTTCFASTTSTSGSEMATFLIEDMSKPYT 270
+ C++ D + + Y+S+ EL+ C + S+ + +D P T
Sbjct: 338 VENNCKFWADCIAKLTSQKAYRSVRTLSAELLPMCLGTQIFIEVSKCCSIAAKDSKTPNT 397
Query: 269 SSHQLI 252
H++I
Sbjct: 398 EDHEII 403
>U88184-14|AAK31520.1| 821|Caenorhabditis elegans Hypothetical
protein F36H5.1 protein.
Length = 821
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 431 WNLDSKLRSSFLTVY----KSISFNKHELVTTCFASTTSTSGSEM 309
W ++ K S FL ++ ++ +F H++ T C+ + ST+G +
Sbjct: 307 WRIELKRVSGFLEIHLHCGENATFLYHQIETDCWFNLVSTNGKHL 351
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,114,355
Number of Sequences: 27780
Number of extensions: 280739
Number of successful extensions: 775
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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