Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_E06
         (442 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   6.4  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   6.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            22   8.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            22   8.4  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          22   8.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 163 EMEIDPLEGSSYELNRIIKPEIKQEDEEED 252
           E+E    EG S    +  K EI+ +DE+ED
Sbjct: 40  ELERKRAEGESDFGRKKKKKEIRYDDEDED 69


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 6.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 278  NWPNACKPTKILLNLTRPMQWSILRQE 358
            NW N C+ TK + +  +   W   R+E
Sbjct: 1062 NWSNVCEATKRITSALQ-QDWDETRRE 1087


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 252  PLQYNGFITTGPMRANQPRSY 314
            P++YNG +TT     N    Y
Sbjct: 3120 PIEYNGLLTTACAGTNSSYMY 3140


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 252  PLQYNGFITTGPMRANQPRSY 314
            P++YNG +TT     N    Y
Sbjct: 3123 PIEYNGLLTTACAGTNSSYMY 3143


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 142  NNKTIIMEMEIDPLEGSSYELNRIIKPEIKQEDEEED 252
            NNK I+ E+     +G   E+ + +      E+EEE+
Sbjct: 937  NNKLIVRELLRHYPDGLQKEVKKEVDAAEDDEEEEEE 973


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,097
Number of Sequences: 2352
Number of extensions: 9111
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)