Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E06
(442 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 29 1.5
Z78416-4|CAB01678.2| 611|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical pr... 29 2.0
X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger pro... 29 2.0
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 28 2.6
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 2.6
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 28 2.6
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 28 2.6
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 28 2.6
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 28 2.6
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 28 2.6
L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 27 8.0
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 27 8.0
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 27 8.0
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 27 8.0
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 163 EMEIDPLEGSSYELNRIIKP-EIKQEDEEEDHYNTMDLLQLAQCVQTNQDPIEFN 324
E E++ EG + + ++ E + +DE+E+ +D + + ++ +DP E N
Sbjct: 39 EEEMEENEGDDEDEDEMVMDDEEEDDDEDEEEATNLDAPEAPEALEAQEDPEELN 93
>Z78416-4|CAB01678.2| 611|Caenorhabditis elegans Hypothetical
protein C23H4.4 protein.
Length = 611
Score = 28.7 bits (61), Expect = 2.0
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +1
Query: 187 GSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPIEFNSTDAMVDPKTGVMV 366
G+SYE+ R + E D +D LQL Q QT D ++ A++ +M
Sbjct: 268 GNSYEIARRHNCTSENSQEIVDCMRNIDALQLLQ-TQTVMDDVDLLFFKAIIRAPP-LMD 325
Query: 367 CLHCLDEFESNLLADHMM 420
L EF+ N+ A +M+
Sbjct: 326 VKQKLSEFKENVTARNML 343
>Z54282-1|CAA91056.2| 1201|Caenorhabditis elegans Hypothetical
protein F52E10.1 protein.
Length = 1201
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 295 QTNQDPIEFNSTDAMVDPKTGVMVCLHCLDEFESNLLADHMMNAHNYRR 441
Q + +++ + + T V+VC HC LL DH+ H + R
Sbjct: 630 QARHEAYKYSEENFLPPLSTPVVVCFHCGTRCHYTLLHDHLDYCHYWPR 678
>X58520-1|CAA41410.1| 1203|Caenorhabditis elegans zinc-finger
protein protein.
Length = 1203
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 295 QTNQDPIEFNSTDAMVDPKTGVMVCLHCLDEFESNLLADHMMNAHNYRR 441
Q + +++ + + T V+VC HC LL DH+ H + R
Sbjct: 632 QARHEAYKYSEENFLPPLSTPVVVCFHCGTRCHYTLLHDHLDYCHYWPR 680
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 127 FIVSNNNKTIIMEMEIDPLEGSSYELNRIIKP---EIKQEDEEEDHYNTM 267
+I+ NN + E + + S+ +L ++ P E QE+EEE+ Y M
Sbjct: 1217 YIIQGNNFLKLKERKSGTDKNSAIDLANMLNPDGVEYTQEEEEEEEYEEM 1266
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 127 FIVSNNNKTIIMEMEIDPLEGSSYELNRIIKP---EIKQEDEEEDHYNTM 267
+I+ NN + E + + S+ +L ++ P E QE+EEE+ Y M
Sbjct: 1217 YIIQGNNFLKLKERKSGTDKNSAIDLANMLNPDGVEYTQEEEEEEEYEEM 1266
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 127 FIVSNNNKTIIMEMEIDPLEGSSYELNRIIKP---EIKQEDEEEDHYNTM 267
+I+ NN + E + + S+ +L ++ P E QE+EEE+ Y M
Sbjct: 1217 YIIQGNNFLKLKERKSGTDKNSAIDLANMLNPDGVEYTQEEEEEEEYEEM 1266
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +1
Query: 130 IVSNNNKTIIMEMEIDPLEGSSYELNRIIKPEIKQEDEEEDHYNTMD 270
I SN+ + I + + P G + E + ++ E K E+E E+H N+ D
Sbjct: 119 IPSNDTSSPIFDSAVVP-SGPAQEEDEAVEEEKKVEEEHENHGNSED 164
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 127 FIVSNNNKTIIMEMEIDPLEGSSYELNRIIKP---EIKQEDEEEDHYNTM 267
+I+ NN + E + + S+ +L ++ P E QE+EEE+ Y M
Sbjct: 1217 YIIQGNNFLKLKERKSGTDKNSAIDLANMLNPDGVEYTQEEEEEEEYEEM 1266
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 127 FIVSNNNKTIIMEMEIDPLEGSSYELNRIIKP---EIKQEDEEEDHYNTM 267
+I+ NN + E + + S+ +L ++ P E QE+EEE+ Y M
Sbjct: 1217 YIIQGNNFLKLKERKSGTDKNSAIDLANMLNPDGVEYTQEEEEEEEYEEM 1266
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 190 SSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQ 288
SS E II K EDEEE+ Y T+++ +L Q
Sbjct: 198 SSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQ 230
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 190 SSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQ 288
SS E II K EDEEE+ Y T+++ +L Q
Sbjct: 181 SSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQ 213
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 190 SSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQ 288
SS E II K EDEEE+ Y T+++ +L Q
Sbjct: 215 SSVETLHIIGTYEKVEDEEEEVYETVNVFKLKQ 247
>L16559-9|AAA27928.2| 1148|Caenorhabditis elegans Hypothetical
protein C06E1.10 protein.
Length = 1148
Score = 27.5 bits (58), Expect = 4.6
Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 223 EIKQEDEEEDHYNTMDLLQLAQCVQTNQDPIEFNSTDAMVD--PKTGV 360
E E+EEE+ D+ V+ +PI+ + D +D P+T +
Sbjct: 142 ESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDEAIDGNPETNL 189
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 410 SAKRLDSNSSRQCRQTITPVLGSTIASVELNSIGSWLVCTHWAS 279
S+ ++SS T V+ ST +S + S+ CT WA+
Sbjct: 100 SSTTSSNSSSSTSSSDSTSVVSSTSSSTTTTCVDSFSTCTSWAA 143
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 187 GSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPI 315
G+S+E ++EEE+ Y+ M L+L Q + Q+P+
Sbjct: 174 GTSFEHFNQSAVHTSYDEEEEELYDCMSRLRLVQFQKDTQEPM 216
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical
protein F17E5.1a protein.
Length = 961
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 187 GSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPI 315
G+S+E ++EEE+ Y+ M L+L Q + Q+P+
Sbjct: 515 GTSFEHFNQSAVHTSYDEEEEELYDCMSRLRLVQFQKDTQEPM 557
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 187 GSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPI 315
G+S+E ++EEE+ Y+ M L+L Q + Q+P+
Sbjct: 174 GTSFEHFNQSAVHTSYDEEEEELYDCMSRLRLVQFQKDTQEPM 216
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 26.6 bits (56), Expect = 8.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 187 GSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPI 315
G+S+E ++EEE+ Y+ M L+L Q + Q+P+
Sbjct: 515 GTSFEHFNQSAVHTSYDEEEEELYDCMSRLRLVQFQKDTQEPM 557
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical protein
C32E12.4 protein.
Length = 1553
Score = 26.6 bits (56), Expect = 8.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 163 EMEIDPLEGSSYELNRIIKPEIKQEDEEEDHYNTMDLLQLAQCVQTNQDPIEFNSTDAMV 342
E EI+ E YE EI+ EDEEE Y ++L+ + ++ I+ S ++
Sbjct: 824 EEEIED-ESDEYEDEEYWDEEIEYEDEEEYEYEDEEVLE--EYGDEEEEDIDMKSVESSD 880
Query: 343 DPKTGVMVCLHCLDEFE 393
+ VM L + E
Sbjct: 881 VEEESVMEVLEPSESHE 897
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,088,037
Number of Sequences: 27780
Number of extensions: 190716
Number of successful extensions: 590
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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