Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E05
(555 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55DBC Cluster: PREDICTED: similar to CG2714-PA,... 41 0.022
UniRef50_O76906 Cluster: Protein cramped; n=3; melanogaster subg... 39 0.068
UniRef50_Q29HQ6 Cluster: GA15444-PA; n=1; Drosophila pseudoobscu... 39 0.090
UniRef50_Q4TCI0 Cluster: Chromosome undetermined SCAF6900, whole... 38 0.12
UniRef50_Q16FP8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.63
UniRef50_Q7RCK3 Cluster: Leucyl-tRNA synthetase-related; n=3; Pl... 36 0.84
UniRef50_UPI0000F2BF40 Cluster: PREDICTED: hypothetical protein;... 35 1.5
UniRef50_Q8GRK0 Cluster: Putative uncharacterized protein P0438G... 35 1.5
UniRef50_UPI00015B5E33 Cluster: PREDICTED: similar to cramped pr... 34 1.9
UniRef50_Q1LX72 Cluster: Novel protein similar to vertebrate des... 34 1.9
UniRef50_Q8LJS2 Cluster: Histone deacetylase HDT1; n=1; Glycine ... 34 1.9
UniRef50_UPI0000F1D8CE Cluster: PREDICTED: similar to Protein cr... 34 2.6
UniRef50_Q29CR6 Cluster: GA20610-PA; n=1; Drosophila pseudoobscu... 34 2.6
UniRef50_UPI0001553888 Cluster: PREDICTED: similar to mKIAA1116 ... 33 3.4
UniRef50_Q2SHC4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.4
UniRef50_Q5VSN0 Cluster: SH3-domain kinase binding protein 1; n=... 33 3.4
UniRef50_Q96JG9 Cluster: Zinc finger protein 469; n=5; Eutheria|... 33 3.4
UniRef50_Q1YJ73 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q0RJE7 Cluster: Putative WD-40 repeat protein; n=1; Fra... 33 4.5
UniRef50_A5P172 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 4.5
UniRef50_A1T5E9 Cluster: Putative uncharacterized protein precur... 33 4.5
UniRef50_Q33AN7 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q4G0N4 Cluster: UPF0465 protein C5orf33; n=40; Euteleos... 33 4.5
UniRef50_A5FXC1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_UPI000038353E Cluster: COG0343: Queuine/archaeosine tRN... 32 7.8
UniRef50_Q2J9P1 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_Q7WUL9 Cluster: PdtI; n=5; Proteobacteria|Rep: PdtI - P... 32 7.8
UniRef50_A7DKA7 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_A1VAX6 Cluster: TRNA/rRNA methyltransferase; n=3; Desul... 32 7.8
UniRef50_A2FAX5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.8
UniRef50_Q7UZG1 Cluster: 30S ribosomal protein S6; n=6; Cyanobac... 32 7.8
>UniRef50_UPI0000D55DBC Cluster: PREDICTED: similar to CG2714-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG2714-PA, isoform A - Tribolium castaneum
Length = 738
Score = 40.7 bits (91), Expect = 0.022
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 13/62 (20%)
Frame = +3
Query: 408 WVEGAVQDFSLSSFLSHLEG-----------RHHHPDLA--VDPQLQSLMAESSVDYVAK 548
W+ V D+SLSS L HL+ H L+ VD QL++L+ E+SVDY AK
Sbjct: 666 WINADVADYSLSSLLGHLDCPSKTNQSMVSLSHDDTQLSQDVDAQLRTLLIETSVDYTAK 725
Query: 549 FA 554
FA
Sbjct: 726 FA 727
>UniRef50_O76906 Cluster: Protein cramped; n=3; melanogaster
subgroup|Rep: Protein cramped - Drosophila melanogaster
(Fruit fly)
Length = 982
Score = 39.1 bits (87), Expect = 0.068
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 408 WVEGAVQDFSLSSFLSHLEGRHHHPDLAVDPQLQSLMAESSVDYVAKF 551
W+E + DFSL+S L HL+ D+ S+++ESSVD+ KF
Sbjct: 922 WLEDNINDFSLTSLLGHLDEIDATRDILDPSSSMSVISESSVDFRHKF 969
>UniRef50_Q29HQ6 Cluster: GA15444-PA; n=1; Drosophila
pseudoobscura|Rep: GA15444-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 863
Score = 38.7 bits (86), Expect = 0.090
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 408 WVEGAVQDFSLSSFLSHLEGRHHHPDLAVDPQLQSLMAESSVDYVAKF 551
W+E + DFSL+S L HL+ D+ S+++ESSVD+ KF
Sbjct: 803 WLEENINDFSLTSLLGHLDEIDATRDIIDPSSSMSVISESSVDFRHKF 850
>UniRef50_Q4TCI0 Cluster: Chromosome undetermined SCAF6900, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF6900,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 378
Score = 38.3 bits (85), Expect = 0.12
Identities = 30/92 (32%), Positives = 35/92 (38%)
Frame = +2
Query: 59 LRAERIQRAVLLPRGGQAHTSAPLQERFRQQ*RCARCNIVCRNRRGADTGGRPARQGRGE 238
LR R + L GG QER R R +CR G G P R+ R
Sbjct: 231 LRRRRRRHPAGLAEGGGVRDRGGQQERHRP---LRRTRGLCRGHLGGSGTGGPGRKKRRV 287
Query: 239 AGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
GG L +PR+ AR R QA AP
Sbjct: 288 RGGPALLPLQPRLRRAGEARQGEPRRHQAAAP 319
>UniRef50_Q16FP8 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 284
Score = 35.9 bits (79), Expect = 0.63
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Frame = +3
Query: 411 VEGAVQDFSLSSFLSHLEGRHHHPD-----LAVDPQLQSLMAESSVDYVAKF 551
++ + D SLSSFL HL+ + A D S+++ESSVDY+A+F
Sbjct: 217 IDTDINDISLSSFLGHLDAVYQSETPTARKRASDQMNISIISESSVDYIARF 268
>UniRef50_Q7RCK3 Cluster: Leucyl-tRNA synthetase-related; n=3;
Plasmodium (Vinckeia)|Rep: Leucyl-tRNA
synthetase-related - Plasmodium yoelii yoelii
Length = 1273
Score = 35.5 bits (78), Expect = 0.84
Identities = 18/64 (28%), Positives = 34/64 (53%)
Frame = +3
Query: 51 PYFYVLSESNGRFYFHEGDRRIPLPLSKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKV 230
P+ Y E NG+ YF+ G+++ KN ++N++ + + D E +D + KV
Sbjct: 630 PFMYKSEEKNGKEYFYMGEKK------KNNNNDNDENNNNDNDENNDNENNNDDNENNKV 683
Query: 231 EVKQ 242
E+K+
Sbjct: 684 EIKK 687
>UniRef50_UPI0000F2BF40 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 648
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 182 RNRRGADTGGRPARQGRGEAGGGL 253
R RRG G RP R+G+GEAG GL
Sbjct: 56 RGRRGEIEGARPKRRGKGEAGKGL 79
>UniRef50_Q8GRK0 Cluster: Putative uncharacterized protein
P0438G07.124; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0438G07.124 - Oryza sativa subsp. japonica (Rice)
Length = 233
Score = 34.7 bits (76), Expect = 1.5
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 155 RCARCNIVCRNRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
R ARC R R G AR+G G G G + QA+ R AG R
Sbjct: 27 RAARCAAAQRRGRAVRRRGAEARRGGGRPGRGRQAQAQCRAQAGGSER 74
>UniRef50_UPI00015B5E33 Cluster: PREDICTED: similar to cramped
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to cramped protein - Nasonia vitripennis
Length = 759
Score = 34.3 bits (75), Expect = 1.9
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 14/63 (22%)
Frame = +3
Query: 408 WVEGAVQDFSLSSFLSHLEG--RHHHPDLAVDPQLQ------------SLMAESSVDYVA 545
W+ V DFSLSSFL LE + A P ++ LM E+SVDY+A
Sbjct: 683 WLNSEVADFSLSSFLGQLESPVKGSQRSQAEVPMIEIIRPSSDVANMHCLMGENSVDYMA 742
Query: 546 KFA 554
KFA
Sbjct: 743 KFA 745
>UniRef50_Q1LX72 Cluster: Novel protein similar to vertebrate
desmuslin; n=1; Danio rerio|Rep: Novel protein similar
to vertebrate desmuslin - Danio rerio (Zebrafish)
(Brachydanio rerio)
Length = 1073
Score = 34.3 bits (75), Expect = 1.9
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 69 SESNGRFYFHEGDRRIPLPLSKNAFDNNNDARDVTSFAETDEEQIQEDVQPG--KVEVKQ 242
S ++ +F+ +E R +P+ +S A + + RD+ SF + + +PG VEVK+
Sbjct: 376 SSTSSQFHSYEPSRIVPISVSNRAQQSPDSRRDMISFTKAAQAAASGTSKPGVSSVEVKR 435
Query: 243 E 245
E
Sbjct: 436 E 436
>UniRef50_Q8LJS2 Cluster: Histone deacetylase HDT1; n=1; Glycine
max|Rep: Histone deacetylase HDT1 - Glycine max
(Soybean)
Length = 295
Score = 34.3 bits (75), Expect = 1.9
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 150 NNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSASRPS 269
N++A D + +E DEE E GK E+K EG ++PS
Sbjct: 101 NDNASDFSDSSEEDEELALEGQDNGKPELKAEGAKVTKPS 140
>UniRef50_UPI0000F1D8CE Cluster: PREDICTED: similar to Protein
cramped-like; n=1; Danio rerio|Rep: PREDICTED: similar to
Protein cramped-like - Danio rerio
Length = 1134
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/25 (64%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 480 PDLA-VDPQLQSLMAESSVDYVAKF 551
PD A VD QL +M+ESSVDY+A+F
Sbjct: 1090 PDAAEVDTQLACMMSESSVDYIARF 1114
>UniRef50_Q29CR6 Cluster: GA20610-PA; n=1; Drosophila
pseudoobscura|Rep: GA20610-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 462
Score = 33.9 bits (74), Expect = 2.6
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 144 DNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSASRPSLES 278
D ++D V S ++T+EE++ +PG +++EG SR +++
Sbjct: 73 DTDSDLESVLSISKTEEERLLRSPEPGTSSLRREGPKRSREGMKA 117
>UniRef50_UPI0001553888 Cluster: PREDICTED: similar to mKIAA1116
protein isoform 1; n=1; Mus musculus|Rep: PREDICTED:
similar to mKIAA1116 protein isoform 1 - Mus musculus
Length = 1494
Score = 33.5 bits (73), Expect = 3.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +2
Query: 161 ARCNIVCRNRRGADTG--GRPARQGRG-EAGGGLRLQAEPRVLAGAGARH*PRR 313
ARC R+G DTG GR ++ +G E+GGG L E G A PR+
Sbjct: 103 ARCRFPRPRRQGGDTGARGRKRKEEKGVESGGGRSLSVEAASERGGEAEKAPRQ 156
>UniRef50_Q2SHC4 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 111
Score = 33.5 bits (73), Expect = 3.4
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = +3
Query: 105 DRRIPLPLSKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQE 245
D + L L K + ++ N+A V +F ++ +++QED++ G V + Q+
Sbjct: 41 DSEVLLVLEKESIESENEANSVLNFLDSMCKKVQEDMESGVVVLNQK 87
>UniRef50_Q5VSN0 Cluster: SH3-domain kinase binding protein 1; n=4;
Tetrapoda|Rep: SH3-domain kinase binding protein 1 -
Homo sapiens (Human)
Length = 553
Score = 33.5 bits (73), Expect = 3.4
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 185 NRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAG 328
+RRG D RP +GRGE G L P L+ P CTQAG
Sbjct: 495 HRRGTDCH-RPWEEGRGEGGAQASLLHPPAKLSEDTGHFCPCSCTQAG 541
>UniRef50_Q96JG9 Cluster: Zinc finger protein 469; n=5; Eutheria|Rep:
Zinc finger protein 469 - Homo sapiens (Human)
Length = 3925
Score = 33.5 bits (73), Expect = 3.4
Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 104 GQAHTSAPLQERFRQQ*RCARCNIVCRNRRGADTGGRPARQGRGEAGGGLRLQAEPRVLA 283
G A T A + RQQ R + + R+ D+GG A +G G GGG PR
Sbjct: 930 GLAPTEADAPSQGRQQRRGKQLKLF---RKDLDSGG--AAEGSGSGGGGRASGLRPRRND 984
Query: 284 GAGARH*PR-RCTQAGAP*HRKFP 352
G G R PR R + AP R P
Sbjct: 985 GLGERPPPRPRRPRTQAPGSRADP 1008
>UniRef50_Q1YJ73 Cluster: Putative uncharacterized protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Putative uncharacterized
protein - Aurantimonas sp. SI85-9A1
Length = 595
Score = 33.1 bits (72), Expect = 4.5
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +2
Query: 35 AQRRVSVLLRAERIQRAVLLPRGG-QAHTSAPLQERF-RQQ*RCARCNIVCRNRRGADTG 208
A R V + +R +RA + R Q H A R RQQ R ++ C+ R A G
Sbjct: 345 AGRHVLRIAAGDRQRRAAVFGRDRHQLHRIAAEDRRLARQQDRAGVADLACQRCRVAACG 404
Query: 209 GRPARQGRGEAGGGLRLQ 262
RPA + GG + LQ
Sbjct: 405 IRPALRRGSRCGGDVALQ 422
>UniRef50_Q0RJE7 Cluster: Putative WD-40 repeat protein; n=1;
Frankia alni ACN14a|Rep: Putative WD-40 repeat protein -
Frankia alni (strain ACN14a)
Length = 688
Score = 33.1 bits (72), Expect = 4.5
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +2
Query: 197 ADTGGRPARQGRGEAGGGLRLQAEPRVLAGA 289
A TGGRPA QGR AG G + PR + A
Sbjct: 141 ATTGGRPAGQGRPLAGAGTAMGPSPRAASTA 171
>UniRef50_A5P172 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 673
Score = 33.1 bits (72), Expect = 4.5
Identities = 32/80 (40%), Positives = 35/80 (43%)
Frame = +2
Query: 62 RAERIQRAVLLPRGGQAHTSAPLQERFRQQ*RCARCNIVCRNRRGADTGGRPARQGRGEA 241
RA R + RGG A L +R R + R RRG GG PAR GRG
Sbjct: 378 RAARSPGPSIRDRGGGALRPGAL-DRGRPRPAALGGGGAARPRRGGGRGGGPARAGRG-- 434
Query: 242 GGGLRLQAEPRVLAGAGARH 301
GGG EPR AG RH
Sbjct: 435 GGG-----EPRARHPAG-RH 448
>UniRef50_A1T5E9 Cluster: Putative uncharacterized protein
precursor; n=1; Mycobacterium vanbaalenii PYR-1|Rep:
Putative uncharacterized protein precursor -
Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
Length = 552
Score = 33.1 bits (72), Expect = 4.5
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
RG D G + GRG AGGG Q + GAG R
Sbjct: 267 RGGDAGLLGGKGGRGGAGGGASAQIGDTITGGAGGR 302
>UniRef50_Q33AN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 631
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP*HRKFPP 355
G TGG P RQGRGEAG L ++ G RH R + R+ P
Sbjct: 45 GRSTGGTPNRQGRGEAGW---LASQTAADDGGATRHRTREAAEGEKGRRREHSP 95
>UniRef50_Q4G0N4 Cluster: UPF0465 protein C5orf33; n=40;
Euteleostomi|Rep: UPF0465 protein C5orf33 - Homo sapiens
(Human)
Length = 442
Score = 33.1 bits (72), Expect = 4.5
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRL--QAEPRVLAGAGAR 298
RG GG AR G GGG R Q +PR LAG G+R
Sbjct: 24 RGPGAGGPAARPRLGGDGGGRRHLGQGQPRELAGCGSR 61
>UniRef50_A5FXC1 Cluster: Putative uncharacterized protein; n=1;
Acidiphilium cryptum JF-5|Rep: Putative uncharacterized
protein - Acidiphilium cryptum (strain JF-5)
Length = 246
Score = 32.7 bits (71), Expect = 5.9
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Frame = +2
Query: 173 IVCRNRRGADTG---GRPARQGRGEAGGGLRLQAE 268
+VCR +RG + G G R+GRG A G R QAE
Sbjct: 59 VVCRGQRGPNAGAARGARFRRGRGAAQAGRRAQAE 93
>UniRef50_UPI000038353E Cluster: COG0343: Queuine/archaeosine
tRNA-ribosyltransferase; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG0343: Queuine/archaeosine
tRNA-ribosyltransferase - Magnetospirillum
magnetotacticum MS-1
Length = 216
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = -1
Query: 114 CACPPRGSRTARWIRSARRSTETLRWAWATASVRFSSC 1
CACPP G R+ R R A R AW +AS R C
Sbjct: 157 CACPPSGRRSRR--RCASRCAGPSAAAWPSASSRARRC 192
>UniRef50_Q2J9P1 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. CcI3|Rep: Putative uncharacterized protein -
Frankia sp. (strain CcI3)
Length = 156
Score = 32.3 bits (70), Expect = 7.8
Identities = 20/55 (36%), Positives = 23/55 (41%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP*HRKFPP 355
RG G P + G G AG L R+ A AG R P RC+ P PP
Sbjct: 45 RGCARRGGPHKHGLGHAGPAAALGRAVRIPATAGIRSEPIRCSHRIDPEWMSDPP 99
>UniRef50_Q7WUL9 Cluster: PdtI; n=5; Proteobacteria|Rep: PdtI -
Pseudomonas putida
Length = 600
Score = 32.3 bits (70), Expect = 7.8
Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 200 DTGGRPARQGRGEAGGGLRLQAE-PRVLAGAGARH*PRRCTQAG 328
D R Q G+ GG AE PR LA A ARH RC QAG
Sbjct: 519 DCQTRQQWQALGQLLGGTCTPAELPRRLASADARHWQTRCQQAG 562
>UniRef50_A7DKA7 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 476
Score = 32.3 bits (70), Expect = 7.8
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 173 IVCRNRRGADTGGRPARQGR-GEAGGGLRLQAEPRV--LAGAGARH*PRRCTQAGAP*HR 343
+ CR+ R G RP +GR +A GGLRL+ R LAGA A H AG P HR
Sbjct: 334 VPCRHGRH---GARPRTRGRDAQARGGLRLRHRHRSRRLAGARAEH----AVPAGPPRHR 386
>UniRef50_A1VAX6 Cluster: TRNA/rRNA methyltransferase; n=3;
Desulfovibrio|Rep: TRNA/rRNA methyltransferase -
Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
Length = 254
Score = 32.3 bits (70), Expect = 7.8
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 2/24 (8%)
Frame = -3
Query: 532 TLDSAISDCS--WGSTARSGWWWR 467
TL A++DC+ WG+TAR+G W R
Sbjct: 66 TLSEAVADCTAVWGTTARTGGWRR 89
>UniRef50_A2FAX5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 277
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 135 NAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSASRPS 269
+AF ++R T+F E DE+ QP K E+K+E + S PS
Sbjct: 87 SAFSKRTESRPTTTFKERDEQP-----QPPKPEIKKESATNSPPS 126
>UniRef50_Q7UZG1 Cluster: 30S ribosomal protein S6; n=6;
Cyanobacteria|Rep: 30S ribosomal protein S6 -
Prochlorococcus marinus subsp. pastoris (strain CCMP
1378 / MED4)
Length = 154
Score = 32.3 bits (70), Expect = 7.8
Identities = 17/71 (23%), Positives = 33/71 (46%)
Frame = +3
Query: 66 LSESNGRFYFHEGDRRIPLPLSKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQE 245
LSE R+ + + +P P S N N ++ +D+ S T++ + +E+ K +
Sbjct: 84 LSEDVIRYLTVKQEGPLPTPRSSNKGYNQSEKKDIESIDSTNKSEFKEEANDKKTATSES 143
Query: 246 GGSASRPSLES 278
S + S +S
Sbjct: 144 TSSQGKESQKS 154
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 440,401,007
Number of Sequences: 1657284
Number of extensions: 7949245
Number of successful extensions: 37761
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 35237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37646
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 36655321736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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