Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E05
(555 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1186 + 11266210-11266517,11266608-11266656 35 0.050
05_03_0163 + 9070781-9071320 33 0.12
06_03_0455 + 20978658-20978677,20979104-20979608 31 0.82
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627... 30 1.1
03_05_0521 + 25160245-25160883 30 1.1
08_02_1474 - 27365548-27366054 30 1.4
02_02_0183 + 7576901-7576908,7577666-7578176 30 1.4
01_03_0231 + 14014243-14014390,14015053-14015141,14017859-140179... 30 1.4
01_06_0154 - 27049218-27049517,27049679-27050107 29 1.9
08_01_0322 - 2898272-2898475,2898548-2898730,2898817-2899702,290... 29 2.5
01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547 29 2.5
12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362 29 3.3
11_06_0292 - 22015603-22015716,22015774-22016163 29 3.3
03_06_0088 - 31562596-31563096 29 3.3
01_07_0147 - 41474003-41474308,41474706-41474750 29 3.3
01_07_0143 - 41443030-41443335,41443733-41443777 29 3.3
09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006 28 4.4
07_03_0624 + 20044406-20044756,20045168-20045221 28 4.4
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 28 4.4
07_01_0629 - 4695778-4696077,4696242-4696406,4696497-4696673,469... 28 4.4
06_03_0464 + 21043706-21044305,21044418-21044460,21047402-21047421 28 4.4
04_01_0154 - 1775693-1775942,1776834-1777588 28 4.4
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 28 4.4
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 5.8
06_02_0216 + 13157377-13157583,13159271-13159339,13160727-131608... 28 5.8
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 28 5.8
06_01_0145 + 1092764-1093351 28 5.8
01_01_0349 + 2776093-2776566,2778211-2778729,2778813-2779048,277... 28 5.8
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 27 7.6
09_02_0034 + 3151850-3152341 27 7.6
03_05_0198 + 21890523-21891002 27 7.6
01_06_1762 - 39716723-39717016,39717256-39717332,39717452-397174... 27 7.6
>07_01_1186 + 11266210-11266517,11266608-11266656
Length = 118
Score = 34.7 bits (76), Expect = 0.050
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 155 RCARCNIVCRNRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
R ARC R R G AR+G G G G + QA+ R AG R
Sbjct: 27 RAARCAAAQRRGRAVRRRGAEARRGGGRPGRGRQAQAQCRAQAGGSER 74
>05_03_0163 + 9070781-9071320
Length = 179
Score = 33.5 bits (73), Expect = 0.12
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
G+ GGR QG G GGG L+ E A AGAR
Sbjct: 73 GSGDGGRSRIQGMGGGGGGASLEPEEGAAAVAGAR 107
>06_03_0455 + 20978658-20978677,20979104-20979608
Length = 174
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/35 (57%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 200 DTGGRPARQGRG-EAGGGLRLQ-AEPRVLAGAGAR 298
+ G A GRG EAGGG R AEPR AGA AR
Sbjct: 35 EAGAEAAVGGRGSEAGGGQRAAGAEPRPEAGAKAR 69
>03_05_0737 +
27258320-27259007,27259263-27259435,27262684-27262758,
27262832-27263296
Length = 466
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +2
Query: 188 RRGADTGGRPARQGRGEAGGG 250
RRG GGR R GRG GGG
Sbjct: 368 RRGYQNGGRGGRGGRGMGGGG 388
>03_05_0521 + 25160245-25160883
Length = 212
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
G GG QG G GGG L+ E A AGAR
Sbjct: 133 GRGNGGGSRIQGMGGGGGGASLEPEEGAAAVAGAR 167
>08_02_1474 - 27365548-27366054
Length = 168
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRLQ 262
RGA GGR AR G GGG RL+
Sbjct: 110 RGAAVGGRGARGGCASGGGGWRLK 133
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 29.9 bits (64), Expect = 1.4
Identities = 22/50 (44%), Positives = 23/50 (46%)
Frame = +2
Query: 179 CRNRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAG 328
CR R G GGR GRG GG +R A R G G R RRC G
Sbjct: 26 CRRRYG---GGR-WEYGRGGGGGWIRRPARQR---GGGGRRRRRRCGGGG 68
>01_03_0231 +
14014243-14014390,14015053-14015141,14017859-14017949,
14018088-14018215,14018703-14018784,14019022-14019081,
14019160-14019251,14019342-14019462,14019873-14019928,
14020193-14020272,14020774-14020820,14020940-14020989,
14021304-14021366,14021515-14021595,14021703-14021717,
14021875-14021985,14022072-14022147,14022350-14022492,
14022721-14022794,14023364-14023454,14023589-14023687
Length = 598
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -1
Query: 192 RRFLQTMLHRAHRYCCRKRSWRGAEVCACPPRGSRT 85
+R L +L AHR CC + G + A PP RT
Sbjct: 12 QRDLHAILRTAHRRCCTRPIGGGLDAPAAPPGDLRT 47
>01_06_0154 - 27049218-27049517,27049679-27050107
Length = 242
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 212 RPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRC 316
+P+ GR E G + EP AGA A PRRC
Sbjct: 90 QPSCNGRQEMSGAAAPRTEPSGGAGAAAASAPRRC 124
>08_01_0322 -
2898272-2898475,2898548-2898730,2898817-2899702,
2902070-2902374
Length = 525
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -1
Query: 114 CACPPRGSRTARWIRSARRSTETLRWAWATASVRFSSC 1
CA PPRG R W RR R T V +C
Sbjct: 40 CAAPPRGGRVPGWSSPERRRGRRKRPPERTPPVTLGAC 77
>01_01_0569 - 4214513-4214669,4215082-4216031,4216488-4216547
Length = 388
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 197 ADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
A GG A + RG GGG L A PR+ G A+
Sbjct: 43 AGGGGGEAGRVRGGGGGGAALFAVPRLFVGLAAK 76
>12_02_0644 - 21463629-21463916,21464147-21464253,21465164-21465362
Length = 197
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 206 GGRPARQGRGEAGGGLRLQAEPRVLAGAG 292
GG A++G+G GGG R + E R+ +G G
Sbjct: 15 GGDGAKKGKGRWGGGGRRRNEQRLGSGGG 43
>11_06_0292 - 22015603-22015716,22015774-22016163
Length = 167
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/40 (45%), Positives = 19/40 (47%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRR 313
G G R+GRG AG L RV AGA AR RR
Sbjct: 72 GGGAAGAGEREGRGRAGVLLPAAPPVRVAAGARARARGRR 111
>03_06_0088 - 31562596-31563096
Length = 166
Score = 28.7 bits (61), Expect = 3.3
Identities = 22/46 (47%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 RGADTGGRPARQG-RGEAGGGLRLQAEPRVLAGAGARH*PRRCTQA 325
RGA GG R G RG AGGG R A V G G RRC A
Sbjct: 83 RGASGGG--GRFGARGAAGGGGRFGARGAVGGGGGDPGARRRCRWA 126
>01_07_0147 - 41474003-41474308,41474706-41474750
Length = 116
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 23 AVAHAQRRVSVLLRAERIQRAVLLPRGGQAH 115
A+AHA RR +A + +L PRGG+ H
Sbjct: 35 AIAHAFRRRGFGAQAAALALPILAPRGGERH 65
>01_07_0143 - 41443030-41443335,41443733-41443777
Length = 116
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 23 AVAHAQRRVSVLLRAERIQRAVLLPRGGQAH 115
A+AHA RR +A + +L PRGG+ H
Sbjct: 35 AIAHAFRRRGFGAQAAALALPILAPRGGERH 65
>09_02_0093 + 4178852-4179220,4179518-4180113,4180214-4181006
Length = 585
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*P 307
R + +GG R EAGGGL EP V A G H P
Sbjct: 404 RHSGSGGEGGRGSEAEAGGGL----EPEVEAEIGGGHEP 438
>07_03_0624 + 20044406-20044756,20045168-20045221
Length = 134
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 215 PARQGRGEAGGGLRLQAE 268
PA+ GRGEAGGG R A+
Sbjct: 20 PAKGGRGEAGGGRRRGAD 37
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Frame = +2
Query: 182 RNRR---GADTGGRPARQGRGEAGGG 250
RNRR GA GGR R+ RG GGG
Sbjct: 736 RNRRSGGGARFGGRDFRRDRGSGGGG 761
>07_01_0629 -
4695778-4696077,4696242-4696406,4696497-4696673,
4697157-4697455,4697589-4697751,4697897-4698088,
4698211-4698385,4698527-4698741,4698948-4699385
Length = 707
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 188 RRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
R + GGRP+ + RG GG R +P V +G R
Sbjct: 19 RVASQCGGRPSTRRRGAGGGPRRAVPQPPVRRPSGDR 55
>06_03_0464 + 21043706-21044305,21044418-21044460,21047402-21047421
Length = 220
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGL 253
G D GG R G GE GGG+
Sbjct: 79 GGDGGGEDGRDGGGEGGGGV 98
>04_01_0154 - 1775693-1775942,1776834-1777588
Length = 334
Score = 28.3 bits (60), Expect = 4.4
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 182 RNRRGADTGGRPARQGR-GEAGGGLRL-QAEPRVLAGAGARH*PRR 313
R RRG GG +R+ R G+ GGL+L R GA R+ RR
Sbjct: 97 RRRRGKSVGGPSSRRRRRGKTAGGLKLPTTAARQDGGATRRNSSRR 142
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +2
Query: 158 CARCNIVCRNRRGADT-GGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
C+RC + A T P++ + GGG+ + P +RH ++ A
Sbjct: 629 CSRCGQADEPKMAATTFSSSPSKVTTAKLGGGVTRSSSPYTQLTFCSRHHFQKAATTAAA 688
Query: 335 *HRKFPP 355
H K PP
Sbjct: 689 FHHKPPP 695
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 18 PKPSPTPSAESPYFYVLSESNGRFYFHEGDRRIPLP 125
P P PTP PY +LS S G H ++ P
Sbjct: 221 PSPPPTPLLVDPYEKLLSRSCGGISSHGKHHKVKTP 256
>06_02_0216 +
13157377-13157583,13159271-13159339,13160727-13160851,
13160959-13161190
Length = 210
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +2
Query: 194 GADTGGRPAR-QGRGEAGGGLRLQAEPRVLAGAG 292
GA G R +G G GG RLQA R AG G
Sbjct: 153 GARAGATADRVRGEGAGRGGRRLQARSRAWAGEG 186
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +3
Query: 69 SESNGRFYFHEGDRRIPLPLSKNAFDN---NNDARDVTSFAETDEEQIQEDVQPGKVEVK 239
+ SN YF E D L + +DN NN R + +++Q Q+++Q K +
Sbjct: 203 NSSNNGMYFGEVDEYFDLVGYNSYYDNRIENNQDRQYGMHEQQEQQQQQQEMQ--KEFAE 260
Query: 240 QEGGSASRPS 269
+EG PS
Sbjct: 261 KEGSECVVPS 270
>06_01_0145 + 1092764-1093351
Length = 195
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAG 292
G GGR R GRG AGG L ++ R G G
Sbjct: 29 GRGRGGRGGRGGRGGAGGRLGVRHGRRGRRGGG 61
>01_01_0349 +
2776093-2776566,2778211-2778729,2778813-2779048,
2779135-2779410,2779447-2779549,2780058-2780330
Length = 626
Score = 27.9 bits (59), Expect = 5.8
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 194 GADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGA-RH*PRRCTQAGA 331
GA+ GG +R G GGG+ L V AG GA RC++ GA
Sbjct: 52 GAEQGGDRSRVVSGGGGGGVGLSPH-EVEAGVGAVAADDGRCSEVGA 97
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 27.5 bits (58), Expect = 7.6
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 411 VEGAVQDFSLSSFLSHLEGRHHHPDLA--VDPQLQSLMAES 527
++G V+D S L+ R P +A +DP+L SL AES
Sbjct: 178 LKGRVEDASKRRMRYKLDDRIFEPSIARAIDPRLPSLYAES 218
>09_02_0034 + 3151850-3152341
Length = 163
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 212 RPARQGRG--EAGGGLRLQAEPRVLAGAG 292
+P R GR AGGG+R A +LAG G
Sbjct: 131 KPPRAGRAGTSAGGGVRRDASYELLAGGG 159
>03_05_0198 + 21890523-21891002
Length = 159
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 191 RGADTGGRPARQGRGEAGGGLRLQA 265
RG+ + PARQ G GGG R++A
Sbjct: 68 RGSGSAPVPARQWSGGGGGGARIRA 92
>01_06_1762 -
39716723-39717016,39717256-39717332,39717452-39717498,
39717953-39718053,39718271-39718360,39718556-39720133
Length = 728
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 209 GRPARQGRGEAGGGLRLQAEPRVLAGAGAR 298
G P +QG G GGG R +A + G AR
Sbjct: 14 GNPGKQGGGGGGGGGRGKAPAAEIRGEAAR 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,987,453
Number of Sequences: 37544
Number of extensions: 261468
Number of successful extensions: 1678
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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