Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E05
(555 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL772197-1|CAH71709.1| 553|Homo sapiens SH3-domain kinase bindi... 33 0.51
AL732327-1|CAI40509.1| 553|Homo sapiens SH3-domain kinase bindi... 33 0.51
AL732325-1|CAI41252.1| 553|Homo sapiens SH3-domain kinase bindi... 33 0.51
X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein. 31 3.6
X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA re... 31 3.6
BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfam... 31 3.6
BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfam... 31 3.6
Y13936-1|CAA74245.1| 546|Homo sapiens protein phosphatase 2C ga... 29 8.3
CR457059-1|CAG33340.1| 546|Homo sapiens a isoform; complete cds... 29 8.3
BT007454-1|AAP36122.1| 546|Homo sapiens protein phosphatase 1G ... 29 8.3
BC022061-1|AAH22061.1| 546|Homo sapiens protein phosphatase 1G ... 29 8.3
BC007361-1|AAH07361.2| 333|Homo sapiens PPM1G protein protein. 29 8.3
BC000057-1|AAH00057.1| 546|Homo sapiens protein phosphatase 1G ... 29 8.3
AC074117-5|AAY14846.1| 546|Homo sapiens unknown protein. 29 8.3
AB209197-1|BAD92434.1| 347|Homo sapiens protein phosphatase 1G ... 29 8.3
>AL772197-1|CAH71709.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 33.5 bits (73), Expect = 0.51
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 185 NRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAG 328
+RRG D RP +GRGE G L P L+ P CTQAG
Sbjct: 495 HRRGTDCH-RPWEEGRGEGGAQASLLHPPAKLSEDTGHFCPCSCTQAG 541
>AL732327-1|CAI40509.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 33.5 bits (73), Expect = 0.51
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 185 NRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAG 328
+RRG D RP +GRGE G L P L+ P CTQAG
Sbjct: 495 HRRGTDCH-RPWEEGRGEGGAQASLLHPPAKLSEDTGHFCPCSCTQAG 541
>AL732325-1|CAI41252.1| 553|Homo sapiens SH3-domain kinase binding
protein 1 protein.
Length = 553
Score = 33.5 bits (73), Expect = 0.51
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = +2
Query: 185 NRRGADTGGRPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAG 328
+RRG D RP +GRGE G L P L+ P CTQAG
Sbjct: 495 HRRGTDCH-RPWEEGRGEGGAQASLLHPPAKLSEDTGHFCPCSCTQAG 541
>X16155-1|CAA34277.1| 418|Homo sapiens COUP-TF protein.
Length = 418
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 GADTGG-RPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
G + GG PA Q GGG E + AG+GA H P+ Q GAP
Sbjct: 12 GGNPGGPNPAAQAARGGGGGA---GEQQQQAGSGAPHTPQTPGQPGAP 56
>X12795-1|CAA31283.1| 423|Homo sapiens protein ( Human v-erbA
related ear-3 gene. ).
Length = 423
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 GADTGG-RPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
G + GG PA Q GGG E + AG+GA H P+ Q GAP
Sbjct: 17 GGNPGGPNPAAQAARGGGGGA---GEQQQQAGSGAPHTPQTPGQPGAP 61
>BC017493-1|AAH17493.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 GADTGG-RPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
G + GG PA Q GGG E + AG+GA H P+ Q GAP
Sbjct: 17 GGNPGGPNPAAQAARGGGGGA---GEQQQQAGSGAPHTPQTPGQPGAP 61
>BC004154-1|AAH04154.1| 423|Homo sapiens nuclear receptor subfamily
2, group F, member 1 protein.
Length = 423
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 GADTGG-RPARQGRGEAGGGLRLQAEPRVLAGAGARH*PRRCTQAGAP 334
G + GG PA Q GGG E + AG+GA H P+ Q GAP
Sbjct: 17 GGNPGGPNPAAQAARGGGGGA---GEQQQQAGSGAPHTPQTPGQPGAP 61
>Y13936-1|CAA74245.1| 546|Homo sapiens protein phosphatase 2C gamma
protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>CR457059-1|CAG33340.1| 546|Homo sapiens a isoform; complete cds,
incl. stopcodon. protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>BT007454-1|AAP36122.1| 546|Homo sapiens protein phosphatase 1G
(formerly 2C), magnesium-dependent, gamma isoform
protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>BC022061-1|AAH22061.1| 546|Homo sapiens protein phosphatase 1G
(formerly 2C), magnesium-dependent, gamma isoform
protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>BC007361-1|AAH07361.2| 333|Homo sapiens PPM1G protein protein.
Length = 333
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 72 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 114
>BC000057-1|AAH00057.1| 546|Homo sapiens protein phosphatase 1G
(formerly 2C), magnesium-dependent, gamma isoform
protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>AC074117-5|AAY14846.1| 546|Homo sapiens unknown protein.
Length = 546
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 327
>AB209197-1|BAD92434.1| 347|Homo sapiens protein phosphatase 1G
variant protein.
Length = 347
Score = 29.5 bits (63), Expect = 8.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 129 SKNAFDNNNDARDVTSFAETDEEQIQEDVQPGKVEVKQEGGSAS 260
S +N D D E DEE+ +E + PG +E K+E GS S
Sbjct: 86 SSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG-MEGKEEPGSDS 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,323,450
Number of Sequences: 237096
Number of extensions: 1291472
Number of successful extensions: 4885
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4877
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5533942988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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