Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_E03
(529 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 103 6e-23
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 71 4e-13
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 71 4e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 66 1e-11
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 66 1e-11
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 66 1e-11
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 65 3e-11
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 65 3e-11
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 65 3e-11
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 62 3e-10
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 44 9e-05
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 41 5e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 41 5e-04
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 41 5e-04
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 41 5e-04
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 41 5e-04
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 41 5e-04
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.003
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.003
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 38 0.004
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.006
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.006
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 35 0.031
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 35 0.031
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 35 0.031
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 33 0.096
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 33 0.096
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 33 0.13
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 33 0.13
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 33 0.17
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 33 0.17
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 31 0.51
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 31 0.51
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 31 0.51
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 30 0.89
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 30 0.89
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 30 0.89
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 30 0.89
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 30 0.89
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 30 0.89
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 30 1.2
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 1.6
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 29 2.1
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 2.1
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 28 4.8
AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical ... 28 4.8
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical pr... 27 8.3
U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family ... 27 8.3
U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family ... 27 8.3
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 27 8.3
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 103 bits (248), Expect = 6e-23
Identities = 47/119 (39%), Positives = 62/119 (52%)
Frame = +3
Query: 144 SVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG 323
S CY C TGHF+R+C +GG G G C+ C GH++RDC G
Sbjct: 35 STCYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGG 93
Query: 324 TGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGT 500
G E +S CYNC ++GHI+R C E G + CY C+++GHISR+CP T
Sbjct: 94 YGGRGGE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 62.5 bits (145), Expect = 2e-10
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 6/49 (12%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQ------TCYNCKKSGHISRNCPDG 497
+CY C + GHI+RNCP G D + TCYNC+++GH SR+CP G
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKG 53
Score = 53.2 bits (122), Expect = 1e-07
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD 302
CY C R+GH +RECT+ G + + ++C++C TGH +RDC + +
Sbjct: 109 CYNCGRSGHISRECTESG--------SAEEKRCYQCQETGHISRDCPSQTN 151
Score = 39.5 bits (88), Expect = 0.001
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 435 SNQTCYNCKKSGHISRNCPDG 497
S++ CY C++ GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 320
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 321 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCKKSGHISRNCP 491
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 492 DGTK 503
K
Sbjct: 682 TRPK 685
Score = 56.8 bits (131), Expect = 9e-09
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 320
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 321 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 431
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +3
Query: 258 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRD 431
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 432 NSNQTCYNCKKSGHISRNCPDGTKT----CYVCGQ 524
C NC GH + +C D K C CGQ
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQ 646
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 287
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 71.3 bits (167), Expect = 4e-13
Identities = 41/124 (33%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCN 320
C+ C GH ++EC + V R C C + GHFA DC + C C
Sbjct: 572 CHNCGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCG 622
Query: 321 GTGHIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRDNSNQTCYNCKKSGHISRNCP 491
GH A +C Q P P C NC + GH A++C E R + C C + GH CP
Sbjct: 623 IEGHFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECP 681
Query: 492 DGTK 503
K
Sbjct: 682 TRPK 685
Score = 56.8 bits (131), Expect = 9e-09
Identities = 35/102 (34%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC---KEEADRCYRCN 320
C C + GHFA +C Q V R C C GHFA DC K C C
Sbjct: 595 CRNCEQLGHFASDCDQPRV---------PRGPCRNCGIEGHFAVDCDQPKVPRGPCRNCG 645
Query: 321 GTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPEGGRD 431
GH A++C P EP C C + GH CP +D
Sbjct: 646 QEGHFAKDCQNERVRMEPTEP-CRRCAEEGHWGYECPTRPKD 686
Score = 48.8 bits (111), Expect = 2e-06
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Frame = +3
Query: 258 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRD 431
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQPRVP 614
Query: 432 NSNQTCYNCKKSGHISRNCPDGTKT----CYVCGQ 524
C NC GH + +C D K C CGQ
Sbjct: 615 RG--PCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQ 646
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDC 287
K+ C C + GHFA++C V E C +C GH+ +C
Sbjct: 635 KVPRGPCRNCGQEGHFAKDCQNERVRMEPT------EPCRRCAEEGHWGYEC 680
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 359
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 360 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCKKSGHISRNCPDGTKTCYV 515
E S + G EG +N + C+NCK GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 516 CGQ 524
CG+
Sbjct: 478 CGE 480
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 297 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCK 461
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC+
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 462 KSGHISRNCPDGTK 503
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 311
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 312 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTK 503
+C+NC + GH + +CPE ++ + CYNC++ GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 326
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 327 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKK 464
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 465 SGHISRNCPDGTK 503
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 264 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 434
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 435 SNQTCYNCKKSG 470
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 47.2 bits (107), Expect = 7e-06
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 27/153 (17%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 321 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 443
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 444 TCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
C+NC++ GH S +CP+ K CY C QP
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 404
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 353
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +3
Query: 420 GGRDNS--NQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG+D N C+NC++ GH S +CP+ K CY C QP
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 290
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 359
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 360 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCKKSGHISRNCPDGTKTCYV 515
E S + G EG +N + C+NCK GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 516 CGQ 524
CG+
Sbjct: 478 CGE 480
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 297 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCK 461
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC+
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 462 KSGHISRNCPDGTK 503
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 311
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 312 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTK 503
+C+NC + GH + +CPE ++ + CYNC++ GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 326
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 327 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKK 464
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 465 SGHISRNCPDGTK 503
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 264 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 434
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 435 SNQTCYNCKKSG 470
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 47.2 bits (107), Expect = 7e-06
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 27/153 (17%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 321 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 443
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 444 TCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
C+NC++ GH S +CP+ K CY C QP
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 404
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 353
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +3
Query: 420 GGRDNS--NQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG+D N C+NC++ GH S +CP+ K CY C QP
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 290
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 66.1 bits (154), Expect = 1e-11
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 15/123 (12%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--P 359
G G +D G + CF C + GH + DC KE R CY C GH +R+C + P
Sbjct: 360 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKP 417
Query: 360 DE-----PSCYNCNKTGHIARNCPEGGRDNSNQ---TCYNCKKSGHISRNCPDGTKTCYV 515
E S + G EG +N + C+NCK GH S CP+ + C+
Sbjct: 418 REGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFN 477
Query: 516 CGQ 524
CG+
Sbjct: 478 CGE 480
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/134 (28%), Positives = 58/134 (43%), Gaps = 15/134 (11%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ--------GGVGARDAGF--NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +R+C + G +GF F T F E
Sbjct: 283 VCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSGFGGGNGGGTGFDSGLTNGFGSGNNGE 342
Query: 297 A---DRCYRCNGTGHIARECAQSPDE--PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCK 461
+ + N G + Q E +C+NC + GH + +CPE ++ + CYNC+
Sbjct: 343 SGFGSGGFGGNSNGFGSGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQ 402
Query: 462 KSGHISRNCPDGTK 503
+ GH SR+CP+ K
Sbjct: 403 QPGHNSRDCPEERK 416
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ-----GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCY 311
VCY C + GH +R+C + G +GF + F F + + +C+
Sbjct: 397 VCYNCQQPGHNSRDCPEERKPREGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCF 456
Query: 312 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
C G GH + EC + P C+NC + GH + CP
Sbjct: 457 NCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 489
Score = 58.0 bits (134), Expect = 4e-09
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTK 503
+C+NC + GH + +CPE ++ + CYNC++ GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 55.6 bits (128), Expect = 2e-08
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 15/133 (11%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT- 326
C+ C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 373 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 425
Query: 327 ------------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKK 464
G A + + C+NC GH + CPE R C+NC +
Sbjct: 426 SGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGE 480
Query: 465 SGHISRNCPDGTK 503
GH S CP+ K
Sbjct: 481 QGHRSNECPNPAK 493
Score = 47.6 bits (108), Expect = 5e-06
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 264 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRDN 434
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 435 SNQTCYNCKKSG 470
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 47.2 bits (107), Expect = 7e-06
Identities = 39/153 (25%), Positives = 57/153 (37%), Gaps = 27/153 (17%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C+ C + GH + +C + R+ C+ C + GH +RDC EE N
Sbjct: 259 CFNCQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFT 311
Query: 321 ------------GTGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RDNSNQ 443
GTG + + S + G + GG R N
Sbjct: 312 GGSSGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNN 371
Query: 444 TCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
C+NC++ GH S +CP+ K CY C QP
Sbjct: 372 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 404
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 353
G G +D G + CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 246 GGGGQDRG--ERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = +3
Query: 420 GGRDNS--NQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG+D N C+NC++ GH S +CP+ K CY C QP
Sbjct: 248 GGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQP 290
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 64.9 bits (151), Expect = 3e-11
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 359
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 360 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
E N G GG + C+NCK GH S CP+ + C
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 510 YVCGQ 524
+ CG+
Sbjct: 265 FNCGE 269
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 297 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 326
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 327 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 458
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 459 KKSGHISRNCPDGTK 503
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 420 GGRDNSNQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG N+N C+NC++ GH S +CP+ K CY C QP
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQP 191
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 64.9 bits (151), Expect = 3e-11
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 359
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 360 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
E N G GG + C+NCK GH S CP+ + C
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 510 YVCGQ 524
+ CG+
Sbjct: 265 FNCGE 269
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 297 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 326
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 327 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 458
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 459 KKSGHISRNCPDGTK 503
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 420 GGRDNSNQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG N+N C+NC++ GH S +CP+ K CY C QP
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQP 191
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 64.9 bits (151), Expect = 3e-11
Identities = 39/125 (31%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Frame = +3
Query: 201 GVGARDAGFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ--SP 359
G G G + CF C + GH + DC KE R CY C GH +REC + P
Sbjct: 145 GFGEGGHGGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKP 204
Query: 360 DEPSC----------YNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
E N G GG + C+NCK GH S CP+ + C
Sbjct: 205 REGRTGGFGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGC 264
Query: 510 YVCGQ 524
+ CG+
Sbjct: 265 FNCGE 269
Score = 59.3 bits (137), Expect = 2e-09
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Frame = +3
Query: 147 VCYKCNRTGHFARECTQ---------GGVGARDAGF-NRQREKCFKCNRTGHFARDCKEE 296
VCY C + GH +RECT+ GG G AGF N F G F +
Sbjct: 184 VCYNCQQPGHTSRECTEERKPREGRTGGFGG-GAGFGNNGGNDGF--GGDGGFGGGEERG 240
Query: 297 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCP 416
+C+ C G GH + EC + P C+NC + GH + CP
Sbjct: 241 PMKCFNCKGEGHRSAECPEPP--RGCFNCGEQGHRSNECP 278
Score = 52.4 bits (120), Expect = 2e-07
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 17/135 (12%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGT 326
C+ C + GH + +C + R+ C+ C + GH +R+C EE R R G
Sbjct: 160 CFNCQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGF 212
Query: 327 GHIARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRDNSNQTCYNC 458
G A ++ C+NC GH + CPE R C+NC
Sbjct: 213 GGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNC 267
Query: 459 KKSGHISRNCPDGTK 503
+ GH S CP+ K
Sbjct: 268 GEQGHRSNECPNPAK 282
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +3
Query: 420 GGRDNSNQTCYNCKKSGHISRNCPDGTK-----TCYVCGQP 527
GG N+N C+NC++ GH S +CP+ K CY C QP
Sbjct: 153 GGERNNN--CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQP 191
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 61.7 bits (143), Expect = 3e-10
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR-- 305
K++ S C+ C GH +C + + D CFKC H +CK++ +
Sbjct: 225 KITGSACFHCREPGHRLADCPKRNSSSSDG-------VCFKCGSMEHSIHECKKKGVKGF 277
Query: 306 ----CYRCNGTGHIARECAQS-----PDEPSCYNCNKTGHIARNCPE 419
C+ C GHI+R+C Q+ PD C C H+ R+CPE
Sbjct: 278 PYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324
Score = 54.0 bits (124), Expect = 6e-08
Identities = 38/120 (31%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Frame = +3
Query: 198 GGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 368
G V DA +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 369 SCYNCNKTGHIARNCPEGG-RDNSNQTCYNCKKSGHISRNC--------PDGTKTCYVCG 521
C+ C H C + G + TC+ CK+ GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNC-PDGTK-----TCYVCGQ 524
+C++C + GH +CP+ +S+ C+ C H C G K TC+VC Q
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQ 287
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 43.6 bits (98), Expect = 9e-05
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Frame = +3
Query: 183 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 362
R C Q +G GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 363 E----PSCYNCNKTGHIARNCPEGGRDNSNQTCYNCK--KSGHISRNCPDG 497
P C C H A C D S+ C C+ +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 41.1 bits (92), Expect = 5e-04
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C C GH A G+ D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGI-CTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 321 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCKKSGHI 476
T + A+ C S +E CN K G+ C G S ++C C+ +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 477 ----SRNCPDGTKTCYVCGQ 524
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 240 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 407
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 408 NCPEG--GRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
+C G + + C +C+ S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 41.1 bits (92), Expect = 5e-04
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C C GH A G+ D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGI-CTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 321 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCKKSGHI 476
T + A+ C S +E CN K G+ C G S ++C C+ +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 477 ----SRNCPDGTKTCYVCGQ 524
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 240 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 407
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 408 NCPEG--GRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
+C G + + C +C+ S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +3
Query: 240 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 404
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 405 RNCPEGGRDNSNQ 443
NCP+ + S +
Sbjct: 688 WNCPKKNENTSEK 700
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 297 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCKKS 467
+DRC C G C++ S D S C C ++G +C + N+ C+ C +
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 683
Query: 468 GHISRNCP 491
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 351 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSG-HISRNCPDGTKTCYVCGQ 524
Q+P + C +C + G C + +DN++Q C C++SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNE 682
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 186 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 296
EC Q G F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 693
Score = 27.9 bits (59), Expect = 4.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFAREC 191
K+ + C++CN GH A C
Sbjct: 671 KLKNRACFRCNEMGHIAWNC 690
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +3
Query: 240 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 404
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 405 RNCPEGGRDNSNQ 443
NCP+ + S +
Sbjct: 591 WNCPKKNENTSEK 603
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 297 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCKKS 467
+DRC C G C++ S D S C C ++G +C + N+ C+ C +
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 586
Query: 468 GHISRNCP 491
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 351 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSG-HISRNCPDGTKTCYVCGQ 524
Q+P + C +C + G C + +DN++Q C C++SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNE 585
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 186 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 296
EC Q G F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 596
Score = 27.9 bits (59), Expect = 4.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFAREC 191
K+ + C++CN GH A C
Sbjct: 574 KLKNRACFRCNEMGHIAWNC 593
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +3
Query: 240 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 404
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 405 RNCPEGGRDNSNQ 443
NCP+ + S +
Sbjct: 602 WNCPKKNENTSEK 614
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +3
Query: 297 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRDNSNQTCYNCKKS 467
+DRC C G C++ S D S C C ++G +C + N+ C+ C +
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFK----LKNRACFRCNEM 597
Query: 468 GHISRNCP 491
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 351 QSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSG-HISRNCPDGTKTCYVCGQ 524
Q+P + C +C + G C + +DN++Q C C++SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNE 596
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 186 ECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEE 296
EC Q G F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGWHMASC-FKLKNRACFRCNEMGHIAWNCPKK 607
Score = 27.9 bits (59), Expect = 4.8
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 132 KMSSSVCYKCNRTGHFAREC 191
K+ + C++CN GH A C
Sbjct: 585 KLKNRACFRCNEMGHIAWNC 604
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 41.1 bits (92), Expect = 5e-04
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C C GH A G+ D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGI-CTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 321 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCKKSGHI 476
T + A+ C S +E CN K G+ C G S ++C C+ +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 477 ----SRNCPDGTKTCYVCGQ 524
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 240 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 407
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 408 NCPEG--GRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
+C G + + C +C+ S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 41.1 bits (92), Expect = 5e-04
Identities = 37/140 (26%), Positives = 52/140 (37%), Gaps = 15/140 (10%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN--- 320
C C GH A G+ D N + C CN GH+ C C
Sbjct: 1827 CVPCECNGHSATCDPDTGI-CTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPF 1884
Query: 321 -GTGHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRDNSNQTCYNCKKSGHI 476
T + A+ C S +E CN K G+ C G S ++C C+ +G+
Sbjct: 1885 APTNNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNN 1943
Query: 477 ----SRNCPDGTKTCYVCGQ 524
SR+C + CY+C Q
Sbjct: 1944 NLTDSRSCHPNSGDCYLCEQ 1963
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
Frame = +3
Query: 240 EKCFKCNRTGHFARD--CKEEADRCYRCNGTGHIARECAQSPDEPSCYNC--NKTGHIAR 407
++C +C +G F E C +CNG ++ + P+ CY C N G
Sbjct: 1914 DRCDRC-ASGFFGHPQISGESCSPC-QCNGNNNLTDSRSCHPNSGDCYLCEQNTDGRHCE 1971
Query: 408 NCPEG--GRDNSNQTCYNCKKSGHISRNCPDGTKTC 509
+C G + + C +C+ S S+ C + + C
Sbjct: 1972 SCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKSGGC 2007
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 39.5 bits (88), Expect = 0.001
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +3
Query: 435 SNQTCYNCKKSGHISRNCPDG 497
S++ CY C++ GHISRNCP+G
Sbjct: 2 SDRNCYKCQQPGHISRNCPNG 22
Score = 37.1 bits (82), Expect = 0.008
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQ 443
+CY C + GHI+RNCP G D +
Sbjct: 5 NCYKCQQPGHISRNCPNGESDGGRR 29
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 135 MSSSVCYKCNRTGHFARECTQG-GVGARDAG 224
MS CYKC + GH +R C G G R G
Sbjct: 1 MSDRNCYKCQQPGHISRNCPNGESDGGRRGG 31
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 246 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 335
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/18 (55%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +3
Query: 297 ADR-CYRCNGTGHIAREC 347
+DR CY+C GHI+R C
Sbjct: 2 SDRNCYKCQQPGHISRNC 19
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 246 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 350
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.1 bits (82), Expect = 0.008
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 438 NQTCYNCKKSGHISRNCPDGTKTCYVCGQP 527
+ TC+NCKK GH + C + C CG P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDP 230
Score = 33.5 bits (73), Expect = 0.096
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 297 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 413
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTK 503
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 141 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 269
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +3
Query: 246 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 350
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 37.1 bits (82), Expect = 0.008
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 438 NQTCYNCKKSGHISRNCPDGTKTCYVCGQP 527
+ TC+NCKK GH + C + C CG P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDP 230
Score = 33.5 bits (73), Expect = 0.096
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 297 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC 413
++ C+ C GH A EC S + C NC H A C
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANEC 237
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCPDGTK 503
+C+NC K GH A C R+ C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 141 SSVCYKCNRTGHFARECTQGGVGARDAGF-NRQREKCFKCNRTG 269
S+ C+ C + GH A EC+ + G N + +C ++ G
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNG 244
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +3
Query: 276 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYN 455
A+ +A C+ C+ GH A C P + N + + + ++ S+ TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 456 CKKSGHISRNCPDG 497
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 34.3 bits (75), Expect = 0.055
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPE-GGRDNSNQTCYNCKKSGHISRNCPDGTKTCYVCGQ 524
+C+NC++ GH A CP G+ NQ ++ I TCY CG+
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGE 257
Score = 31.9 bits (69), Expect = 0.29
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +3
Query: 135 MSSSVCYKCNRTGHFARECTQGGV 206
+S CYKC GH+A C +G +
Sbjct: 247 LSDVTCYKCGEKGHYANRCHKGAL 270
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 246 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARE 344
C+KC GH+A C + A + N T H+A E
Sbjct: 252 CYKCGEKGHYANRCHKGA-LAFLSN-TAHLAHE 282
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 372 CYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNC 488
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 267 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 422
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 290
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 372 CYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNC 488
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = +3
Query: 267 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 422
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCK 290
C C H + EC DA + KC C GH ++DCK
Sbjct: 430 CSNCGSDEHKSWECP-------DAPNVTNQIKCTNCGAFGHISKDCK 469
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 303 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 428
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 155
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CYNCNKTG-HIARNCPEGGRDNSNQTCYNCKKSGHISRNCPD 494
C+ C K H A++CP D + CY C H+S CP+
Sbjct: 113 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 152
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +3
Query: 195 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 353
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 93 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 303 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 428
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CYNCNKTG-HIARNCPEGGRDNSNQTCYNCKKSGHISRNCPD 494
C+ C K H A++CP D + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +3
Query: 195 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 353
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 303 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 428
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CYNCNKTG-HIARNCPEGGRDNSNQTCYNCKKSGHISRNCPD 494
C+ C K H A++CP D + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +3
Query: 195 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 353
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 303 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGR 428
RC+RC H A+ C D CY C H++ CPE R
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRR 186
Score = 35.1 bits (77), Expect = 0.031
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +3
Query: 372 CYNCNKTG-HIARNCPEGGRDNSNQTCYNCKKSGHISRNCPD 494
C+ C K H A++CP D + CY C H+S CP+
Sbjct: 144 CFRCGKFATHKAKSCPNVKTDA--KVCYTCGSEEHVSSICPE 183
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
Frame = +3
Query: 195 QGGVGARDAGFNRQRE---KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 353
QG G+R R++ +CF+C + H A+ C K +A CY C H++ C +
Sbjct: 124 QGLKGSRIHPLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRN 485
C +C+GT + + SC CN TG +++ +GG TC C+ SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRN 485
C +C+GT + + SC CN TG +++ +GG TC C+ SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCK 461
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 462 KSGHISRNCPDGTKTC 509
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCK 461
C+E+ D C + C S D +C + C+ I + P SNQ+ Y C
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 462 KSGHISRNCPDGTKTC 509
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGG 425
CY+C GH++++C QS N KT H N E G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVG 351
Score = 31.5 bits (68), Expect = 0.39
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = +3
Query: 366 PSCYNCNKTGHIARNCPEGGRDN 434
P CY C GH++++CP+ ++
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 31.1 bits (67), Expect = 0.51
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 447 CYNCKKSGHISRNCPDGT 500
CY CK GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
Score = 27.9 bits (59), Expect = 4.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGA 212
CYKC GH +++C Q +
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNS 333
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +3
Query: 291 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSG 470
E + C C+GT + + D SC++C ++GH P N N T K+SG
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH-----PSCLNFNQNVTKI-IKRSG 305
Query: 471 HISRNCPDGTKTCYVCG 521
C K+C +CG
Sbjct: 306 WQCLEC----KSCTICG 318
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 144 SVCYKCNRTGHFARECTQGGVGARDAGFNRQRE--KCFKCNRTGHFARDCKEEADRCYRC 317
S C C+ T H R +A + RE CF C R+GH C C C
Sbjct: 312 SPCIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHC 370
Query: 318 NGTGH 332
G H
Sbjct: 371 KGNHH 375
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Frame = +3
Query: 372 CYNCNKTGHIARN--CP-----EGGRDNSNQT--CYNCKKSGHISRNCPDGTKTCYVC 518
C C+ T H+ R+ CP E + + C+ C +SGH C +TC C
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC 370
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVG--ARDAGFNRQREKCFKCNRTGHFARDCKEEADR 305
C++C+R GHF C Q + AR + ++ N +G ++ +E DR
Sbjct: 1357 CHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSGRGFKNGEEGGDR 1410
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 333 IARECAQ--SPDEPSCYNCNKTGHIARNCPE 419
+ R+C Q +P + C+ C++ GH +CP+
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQ 1372
Score = 31.5 bits (68), Expect = 0.39
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = +3
Query: 183 RECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 362
R+C QG A +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGS-----APTDRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 363 EPSCYNCNKTGHIARNCPEGG 425
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 399 IARNCPEGGRDNSNQTCYNCKKSGHISRNCP 491
+ R C +G Q C+ C + GH +CP
Sbjct: 1342 LLRKCNQGSAPTDRQ-CHQCHRIGHFVESCP 1371
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 31.1 bits (67), Expect = 0.51
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 354 SPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCYNCKKSGHISRNCP 491
SP + +K R GR C++C++ GHISR CP
Sbjct: 140 SPRSDGMGSSSKRPRSGRRTGRRGRGGPGH-CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 3.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 372 CYNCNKTGHIARNCPE 419
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 31.1 bits (67), Expect = 0.51
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--KK 464
+AD + C+ G + C + E C N T + + CP G D+ ++ C C K+
Sbjct: 253 QADHMHSCSAAGMYS--CGRKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 465 SGHISRNCPDGTK 503
H N P G +
Sbjct: 309 CDHTCMNTPHGAR 321
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 31.1 bits (67), Expect = 0.51
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = +3
Query: 285 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRDNSNQTCYNCK 461
C+E+ D C + C D +C + C+ I + P SNQ+ Y C
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 462 KSGHISRNCPDGTKTC 509
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +3
Query: 240 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 419
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 420 GGRDNSNQTCYNCKK 464
N N C +C++
Sbjct: 115 VSSLN-NFVCISCRR 128
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical
protein T12D8.1 protein.
Length = 2561
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/75 (22%), Positives = 30/75 (40%)
Frame = +3
Query: 240 EKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPE 419
E C NR+G + D + D C + + D C C K+ H++ + +
Sbjct: 60 ENCMDVNRSGTMSLDMARQCDMSSSCGSCQRMI-----TADSRQCTTCRKSYHLSCDSSD 114
Query: 420 GGRDNSNQTCYNCKK 464
N N C +C++
Sbjct: 115 VSSLN-NFVCISCRR 128
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCKKSGHISR 482
C T +CA + DE Y CN R+CPE +N+ C + KK HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 483 NCPDGT 500
+C DG+
Sbjct: 2858 DCGDGS 2863
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.89
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--KK 464
+AD + C+ G + C E C N T + + CP G D+ ++ C C K+
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 465 SGHISRNCPDGTK 503
H N P G +
Sbjct: 309 CDHTCMNTPHGAR 321
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTCY-NCKKSGHISR 482
C T +CA + DE Y CN R+CPE +N+ C + KK HI
Sbjct: 2805 CILLGATCDSKPDCADASDENPNY-CN-----TRSCPEDYNLCTNRRCIDSAKKCNHID- 2857
Query: 483 NCPDGT 500
+C DG+
Sbjct: 2858 DCGDGS 2863
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.89
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--KK 464
+AD + C+ G + C E C N T + + CP G D+ ++ C C K+
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 465 SGHISRNCPDGTK 503
H N P G +
Sbjct: 309 CDHTCMNTPHGAR 321
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 0.89
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 294 EADRCYRCNGTGHIARECAQSPDEPS-CYNCNKTGHIARNCPEGGRDNSNQTCYNC--KK 464
+AD + C+ G + C E C N T + + CP G D+ ++ C C K+
Sbjct: 253 QADHMHSCSAAGMYS--CGTKGSEIGVCIPMNATCNGIKECPLG--DDESKHCSECARKR 308
Query: 465 SGHISRNCPDGTK 503
H N P G +
Sbjct: 309 CDHTCMNTPHGAR 321
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 357 PDEPSCYNCNKTGHIARNC---PEGG-RDNSNQTCYNCKKSGHISRNCP 491
P+ C C + G +C P+ R+ C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/55 (23%), Positives = 23/55 (41%)
Frame = +3
Query: 141 SSVCYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADR 305
+ +C +C + G C+ + + R +CF C GH + C + DR
Sbjct: 578 NGICAECKQVGGHEPSCS---LAPKTWKRERPPPQCFTCGEMGHISTYCPKRIDR 629
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = +3
Query: 306 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 419
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +3
Query: 276 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 419
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 11/74 (14%)
Frame = +3
Query: 312 RCNGTGHIARECAQSPDEPSCYNCNKTGH-IARNCPEGGR---------DNSNQTCYNCK 461
+C+G +C DE +C C K H +NC + + D S++ +CK
Sbjct: 235 KCDGVS----DCENESDESNCNKCQKGAHKCGKNCIKASKVCDGIPDCDDGSDEHQCDCK 290
Query: 462 K-SGHISRNCPDGT 500
SG C DGT
Sbjct: 291 TCSGSEKALCEDGT 304
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 231 RQREKCFKCNRTGHFARDCKEEA 299
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/36 (27%), Positives = 14/36 (38%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKC 257
C+ C GH AR C + + G+ Q C
Sbjct: 576 CHYCKNVGHMARNCKKKAFAEKRKGYEDQARSITSC 611
Score = 27.1 bits (57), Expect = 8.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 372 CYNCNKTGHIARNC 413
C+ C GH+ARNC
Sbjct: 576 CHYCKNVGHMARNC 589
Score = 27.1 bits (57), Expect = 8.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 447 CYNCKKSGHISRNC 488
C+ CK GH++RNC
Sbjct: 576 CHYCKNVGHMARNC 589
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 1/75 (1%)
Frame = +3
Query: 150 CYKCNRTGHFARECTQGGVGARDAGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN-GT 326
CY C + GH A EC + D N +R+ + + R + D Y + T
Sbjct: 411 CYYCGKRGHTANECRR---KKSDESQNGERQDPSQSEQIAALRRQLAMQNDDPYSSDEST 467
Query: 327 GHIARECAQSPDEPS 371
++ C + ++P+
Sbjct: 468 EALSLSCQKPKEDPT 482
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 369 SCYNCNKTGHIARNCPEGGRDNS 437
+CY C K GH A C D S
Sbjct: 410 NCYYCGKRGHTANECRRKKSDES 432
>AF016439-2|AAB65897.1| 176|Caenorhabditis elegans Hypothetical
protein R02F11.1 protein.
Length = 176
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = +3
Query: 372 CYNCNKTGHIARN-CPEGGRDNSNQTCYNCKKSGHISRNCPDGT-KTCYVCG 521
C + N TG CP G N+N C SG + +C +G T Y CG
Sbjct: 115 CQSGNSTGPCVNQVCPTGFMCNTNNYCCPL-GSGGVLGSCVNGVCPTGYTCG 165
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 447 CYNCKKSGHISRNCPDGTKTCYVC 518
C NC K+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z49129-1|CAA88962.1| 262|Caenorhabditis elegans Hypothetical
protein T05B9.1 protein.
Length = 262
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/73 (27%), Positives = 24/73 (32%), Gaps = 2/73 (2%)
Frame = +3
Query: 303 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDNSNQTC-YNCKKSGHIS 479
RC C H C Y K + R+C + + TC NC S
Sbjct: 146 RCMLCETDEHTIHSCPIYNTNSKRYEGFKDKGLCRSCALPANSDGSATCGRNCMFSRRRC 205
Query: 480 RNCPD-GTKTCYV 515
NC D G YV
Sbjct: 206 TNCWDKGGDKSYV 218
>U80955-3|AAM97944.1| 95|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform a protein.
Length = 95
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 234 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 401
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 402 ARNCPEG 422
+ P+G
Sbjct: 65 RKFGPKG 71
>U80955-1|AAM97945.1| 113|Caenorhabditis elegans Mlp/crp family
(muscle lim protein/cysteine-rich protein) protein 1,
isoform b protein.
Length = 113
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +3
Query: 234 QREKCFKCNRTGHFARDCKEEADR----CYRCNGTGHIARECAQSPDEPSCYNCNKTGHI 401
+ KC KC ++ + A + + C++CN + C +P E Y C K H
Sbjct: 7 EHPKCPKCGKSVYAAEEMSAGGYKWHKFCFKCNMCNKLLDSCTVAPHEAELY-C-KQCHG 64
Query: 402 ARNCPEG 422
+ P+G
Sbjct: 65 RKFGPKG 71
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 447 CYNCKKSGHISRNCPDGTKTCYVC 518
C NC K+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,226,789
Number of Sequences: 27780
Number of extensions: 213597
Number of successful extensions: 1144
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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