Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D24
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.59 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   3.2  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    23   5.5  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    23   7.3  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   7.3  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   7.3  
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   7.3  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 103 GSVIISPFHSEFSSTESPN 47
           G V++ PFH  FSS   PN
Sbjct: 85  GHVMLGPFHQRFSSIIGPN 103


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 381 LKYSVE-EDYQFLSELAALKAITEKVNEGVIKPDNVIDFYNLRFRSLHALSD 533
           LK S E + Y F S+   +  I +K+NE  +      D   ++ +SL  LS+
Sbjct: 236 LKDSDESKQYTFFSKATQIDTIKQKLNECAVIAKKARDVLVVKEKSLEYLSN 287


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +2

Query: 155 PCRCCKTEIEELSPDCG 205
           PC+ C  + +  SP+CG
Sbjct: 2   PCKTCVADCKCTSPNCG 18


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 495 YNLRFRSLHALSDFHGPHSLQLRRL 569
           YN+ +R+L     F  PH  Q+  L
Sbjct: 14  YNIYYRALWLFLKFEVPHCCQMEEL 38


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 167 SICKVRYSIYIYFNYSFWS 111
           S+C V   I+I   YSFWS
Sbjct: 13  SLCFVLCVIHIRKKYSFWS 31


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +3

Query: 396 EEDYQFLSELAALKAITEKVNEGVIKPDNVI 488
           E+D   L  L  + +  E  N  V+ P+N +
Sbjct: 42  EDDLTLLCRLRTINSELENTNFSVLHPENTV 72


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +3

Query: 348 VPKVTKQSFQHLKYSVEEDYQFLSELAALKAITE-KVNEGVIKPDNVIDFYNLRFRSLHA 524
           +PK TK S   +   V ++ + L  +AA       +V E     +++  F + R R+   
Sbjct: 144 LPKATKCSQDLMAKVVGQNRRSLDLIAAKSYFYHSRVAELNNDLESIRSFLHSRLRTATL 203

Query: 525 LSDFHGPHSLQLRRLRNY 578
            +DF G   L    LRNY
Sbjct: 204 RNDFEGQAVLINCLLRNY 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,218
Number of Sequences: 2352
Number of extensions: 9951
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)