Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D22
         (440 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3S865 Cluster: Modular polyketide synthase; n=7; root|...    32   6.3  
UniRef50_A5Z7G0 Cluster: Putative uncharacterized protein; n=2; ...    31   8.3  

>UniRef50_Q3S865 Cluster: Modular polyketide synthase; n=7; root|Rep:
            Modular polyketide synthase - Streptomyces neyagawaensis
          Length = 4825

 Score = 31.9 bits (69), Expect = 6.3
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 301  THAVRA*PDHHS-R*QPTRRRRAAETMNHLTEQPQFIM*RSIEHYVGTVLSLTPYRKI 131
            THA  A P   S R QP  R +AA    HLT++P+ +    + H + T  S  P+R +
Sbjct: 3663 THAAPALPWLLSARSQPALREQAARLHAHLTDRPE-LRPADVAHALATTRSALPHRAV 3719


>UniRef50_A5Z7G0 Cluster: Putative uncharacterized protein; n=2;
           Eubacterium ventriosum ATCC 27560|Rep: Putative
           uncharacterized protein - Eubacterium ventriosum ATCC
           27560
          Length = 438

 Score = 31.5 bits (68), Expect = 8.3
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = -2

Query: 103 FKIWQVYEYNPKLIKNKSKTVQNNYLPIAIFSLV 2
           F+IW ++ +    +KNK +  +NN   I +F+L+
Sbjct: 16  FEIWMLFGFYNNFLKNKPRKSRNNIFIILVFALI 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,714,126
Number of Sequences: 1657284
Number of extensions: 7089597
Number of successful extensions: 13443
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13441
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)