Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D22
         (440 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   5.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   6.9  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   9.1  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +1

Query: 34  CFVQFYFCF 60
           C  QFY+C+
Sbjct: 247 CITQFYYCY 255


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = -2

Query: 169 VGTVLSLTPYRKIT*HVFT--YLDFKIWQVYEYNPKLIKNKSKTVQNNY 29
           VGTV  +     +   V T   L +KI QV+    K I      V NNY
Sbjct: 262 VGTVTLILSCDAVLEEVKTTLLLAYKIRQVFPNEKKNISEFINVVLNNY 310


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -1

Query: 338  LCGCSNYTQART 303
            LCGC  Y   RT
Sbjct: 2173 LCGCEEYPLLRT 2184


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 76  NPKLIKNKSKTVQNNYLP 23
           NPK   N  K   +N+LP
Sbjct: 98  NPKYFPNPDKFDPDNFLP 115


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 198 NCGCSVRWFIVSAARRRRVGC 260
           +C C + W  V   +RR+  C
Sbjct: 709 SCDCDLGWVEVWERKRRQYLC 729


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,388
Number of Sequences: 336
Number of extensions: 2096
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)