Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D22
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    26   0.16 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.6  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 308 VLAYNYYNHRACQHESDHYFKIIFL 382
           +L  NY++  A  HE   + K++FL
Sbjct: 313 ILILNYHHRNADTHEMSEWVKVVFL 337



 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 149 NSVQKNNITCVYL 111
           N V KNN TC+Y+
Sbjct: 127 NVVVKNNGTCLYV 139


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 294 ACVRACLRIITTTTELANM 350
           AC+   LR+I TTT +A +
Sbjct: 383 ACITESLRLIPTTTCIARI 401


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,801
Number of Sequences: 438
Number of extensions: 2617
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)