Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D21
(334 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 31 0.20
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 31 0.20
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 31 0.26
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 31 0.26
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 31 0.26
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 31 0.26
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 31 0.26
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 31 0.26
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 0.61
Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical pr... 27 2.5
U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical pr... 27 2.5
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 27 2.5
U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical pr... 27 3.3
U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 26 5.7
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 26 5.7
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 26 7.5
Z81097-4|CAB03176.1| 100|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical pr... 25 10.0
U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical pr... 25 10.0
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 63 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 31.1 bits (67), Expect = 0.20
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 63 YTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
+T G NC CA +S + T C CKPG Y
Sbjct: 711 FTFGKNCRFPCKCARENSEGCDEITGKCRCKPGYY 745
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 212
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 212
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 212
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 30.7 bits (66), Expect = 0.26
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCA-PRSSHSYPKHTCDCWCKPGTYRVIDTNDCVTLEHCH 212
D +C+ +E EPTC P + + C C G +R N CV + C+
Sbjct: 23 DQECKENESFQTCGTACEPTCGLPTPTFCTLQCVMGCQCNSGFFRRTSDNRCVEQKDCN 81
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 161
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 45 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 161
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 45 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 161
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 45 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 30.7 bits (66), Expect = 0.26
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 39 DVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPG 161
++ C D Y GPNC + C + T C CKPG
Sbjct: 413 ELACSKDSY--GPNCEKQAMCDWNHASECNPETGSCVCKPG 451
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 45 KCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCDCWCKPGTY 167
KC +++Y G +C TC ++ +T C CKPG Y
Sbjct: 370 KCDAEQY--GADCSKTCTCVRENTLMCAPNTGFCRCKPGFY 408
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 29.5 bits (63), Expect = 0.61
Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +3
Query: 63 YTPGPNCGLEPTCAPRSSHSYPKH---TCDCWCKPGT 164
Y P NC LEP ++ H +C CKPG+
Sbjct: 1151 YAPATNCNLEPRICHANAQCVMHHDTNAYECICKPGS 1187
>Z29116-4|CAA82370.2| 206|Caenorhabditis elegans Hypothetical
protein ZK507.4 protein.
Length = 206
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +3
Query: 75 PNCGLE--PTCAPRSSHSYPKHTCDCWCKP 158
PNC + P C + Y H WCKP
Sbjct: 132 PNCNVSVHPHCTRQCKCEYEYHRMQKWCKP 161
>U70856-1|AAB09165.1| 327|Caenorhabditis elegans Hypothetical
protein F57F4.2 protein.
Length = 327
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 159 GTYRVIDTNDCVTLEHCH*PTRQL*LLLVIDVIRNYLTVVN*LIICLF 302
G +RVI T + H H R L +L ++ +Y+ ++ ++I +F
Sbjct: 223 GPHRVIATKNEFLKSHIHSKLRNLMCMLHFFIVMHYIKILKFVLIAIF 270
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/56 (30%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Frame = +3
Query: 45 KCRSDEYTPGPNCGLEPTCAPRSSH-SYPKHTCDCWCKPGTYRVIDTNDCVTLEHC 209
+C DE EPTC + T C CK G R T CV C
Sbjct: 76 ECEGDEELKACGSACEPTCDNENPECDLVCMTNVCQCKKGLVRDSATGKCVEKNKC 131
>U39651-7|AAA80398.2| 494|Caenorhabditis elegans Hypothetical
protein ZK470.1 protein.
Length = 494
Score = 27.1 bits (57), Expect = 3.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = -1
Query: 331 KFIFAFYLIVKRQIINQLTTVK*LRITSITSNNYSCLVG*WQCSNVTQS 185
KF Y + R+ I ++TT+ ITS N W S +QS
Sbjct: 161 KFFLLLYRKIGRKKIGKITTMNFTNITSFDGNETEVFDTSWSLSTPSQS 209
>U40060-6|AAA81144.1| 268|Caenorhabditis elegans Hypothetical
protein F38B6.3 protein.
Length = 268
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -1
Query: 97 VGSSPQLGPGVYSSLRHFTSAFTKIMRHSN 8
+ + P LGP ++S + ++ AFT + + SN
Sbjct: 138 INNIPTLGPPIFSQNQSYSGAFTILYQASN 167
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 135 TCDCWCKPGTYRVIDTNDCVTLE 203
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 135 TCDCWCKPGTYRVIDTNDCVTLE 203
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 135 TCDCWCKPGTYRVIDTNDCVTLE 203
T C CK GT+R + ++ C+ +E
Sbjct: 249 TWRCVCKLGTFRPLGSDKCIPIE 271
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 25.8 bits (54), Expect = 7.5
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 30 VKADVKCRSDEYTPGPNCGLEPTCAPRSSHSYPKHTCD 143
+ A KC S +Y +EPTC RSS TC+
Sbjct: 85 IDAPPKCASHQYNLAEFVCIEPTC--RSSDKLMCRTCE 120
>Z81097-4|CAB03176.1| 100|Caenorhabditis elegans Hypothetical
protein K07A1.6 protein.
Length = 100
Score = 25.4 bits (53), Expect = 10.0
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +3
Query: 93 PTCAPRSSHSYPKHTCDCWCKPGTYRVID-TNDCVTLEHC 209
P P S P C C PG YR T CV L C
Sbjct: 58 PRQPPFSQCKLPCIPYSCRCNPGFYRDNQGTGRCVRLRRC 97
>Z79605-5|CAB01907.2| 316|Caenorhabditis elegans Hypothetical
protein ZK678.6 protein.
Length = 316
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 62 VYTGSQLWTRTNMRTS*LTFVPEAYLR 142
VYT +W+ N S L F+P+ +L+
Sbjct: 241 VYTSEVMWSVLNSCNSYLNFLPDFFLK 267
>U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical
protein C18H9.1 protein.
Length = 308
Score = 25.4 bits (53), Expect = 10.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 72 GPNCGLEPTCAPRSSHSYPKHTCDCWCKP 158
G N G P++ YP+H CD + P
Sbjct: 275 GLNTGRSNHRTPQNFRRYPEHECDYYAGP 303
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,039,375
Number of Sequences: 27780
Number of extensions: 134591
Number of successful extensions: 368
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 368
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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