Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D19
(460 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 31 0.40
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 31 0.40
Z70279-2|CAN86910.1| 215|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 29 2.1
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 29 2.1
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 29 2.1
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 28 3.8
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 27 5.0
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 27 5.0
AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical ... 27 5.0
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 27 6.6
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical ... 27 8.7
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 160 KEKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKARE-AQVESRLVDSA 336
K+K L+ + L S+ D L+ + + A + + + + + AQ +SRL D A
Sbjct: 13548 KQKELEEKQRLESEAATKKADAEKLKLEEQKKKAAEIALIEIQKEQEKLAQEQSRLEDEA 13607
Query: 337 ADFLENYVIQFKMPSSAVEGIRRSLEDGRGKKKTIKQ 447
E ++ + S E + D + KKK +K+
Sbjct: 13608 KKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKK 13644
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 73 EQESTD--LGIGGSVLGIVKDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKG 246
+Q+ TD L + + K D+ + +EK+ K +E +++E L D + LES+
Sbjct: 13209 KQKETDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEI 13268
Query: 247 SPRSARALE-PLSDEPKARE-AQVES 318
+ + A A + L ++ +A++ A+VE+
Sbjct: 13269 ATKKASADKLKLEEQAQAKKAAEVEA 13294
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 31.1 bits (67), Expect = 0.40
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = +1
Query: 160 KEKVLKYAETLRSKREITLIDGVTLESKGSPRSARALEPLSDEPKARE-AQVESRLVDSA 336
K+K L+ + L S+ D L+ + + A + + + + + AQ +SRL D A
Sbjct: 13548 KQKELEEKQRLESEAATKKADAEKLKLEEQKKKAAEIALIEIQKEQEKLAQEQSRLEDEA 13607
Query: 337 ADFLENYVIQFKMPSSAVEGIRRSLEDGRGKKKTIKQ 447
E ++ + S E + D + KKK +K+
Sbjct: 13608 KKSAEKQKLESETKSKQTEEAPKESVDEKPKKKVLKK 13644
Score = 28.3 bits (60), Expect = 2.8
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 73 EQESTD--LGIGGSVLGIVKDCVDDDVYMCLKEKVLKYAETLRSKREITLIDGVTLESKG 246
+Q+ TD L + + K D+ + +EK+ K +E +++E L D + LES+
Sbjct: 13209 KQKETDEKLKLDAEIAAKTKQEADEKSKLDAQEKIKKVSEDDAARKEKELNDKLKLESEI 13268
Query: 247 SPRSARALE-PLSDEPKARE-AQVES 318
+ + A A + L ++ +A++ A+VE+
Sbjct: 13269 ATKKASADKLKLEEQAQAKKAAEVEA 13294
>Z70279-2|CAN86910.1| 215|Caenorhabditis elegans Hypothetical
protein K11E8.1n protein.
Length = 215
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 356 MSFSSKCHHLLSKESEGPLKTV 421
+ FS KC +LL+K+ +GP T+
Sbjct: 4 LRFSGKCRNLLNKKEQGPPSTI 25
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 194 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 87
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 965 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 1000
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 194 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 87
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 961 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 996
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 28.7 bits (61), Expect = 2.1
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -3
Query: 194 LKVSAYFKTFSLRHIYTSSSTQSLTMPKTLPPIPRS 87
LKV F+++S R + S T SLT KT+ IP+S
Sbjct: 961 LKVFTDFRSWSYRMRHISGCTVSLTNDKTVIRIPKS 996
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 195 PQSLCIFQNLLLEAHIHVIVDTVLNNAQNAATDSKICRFLFGGHRAHRRD 46
P+ + N ++ V++D V N+ +SK FL HR HR D
Sbjct: 3292 PEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFRPFLSYRHRLHRPD 3341
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 195 PQSLCIFQNLLLEAHIHVIVDTVLNNAQNAATDSKICRFLFGGHRAHRRD 46
P+ + N ++ V++D V N+ +SK FL HR HR D
Sbjct: 3292 PEQVISLCNWASSKNLRVVIDEVFANSVFDKLNSKFRPFLSYRHRLHRPD 3341
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 253 RSARALEPLSDEPKAREAQVESRLVDSAADFLENYVIQFKMPSSAV 390
RSA +EP D+ K +Q ++R A D +E FK S +
Sbjct: 46 RSALKIEPARDDDKENNSQPQARSQFKAKDTMEQMQSYFKRSISVL 91
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 253 RSARALEPLSDEPKAREAQVESRLVDSAADFLENYVIQFKMPSSAV 390
RSA +EP D+ K +Q ++R A D +E FK S +
Sbjct: 46 RSALKIEPARDDDKENNSQPQARSQFKAKDTMEQMQSYFKRSISVL 91
>AL023838-6|CAB61038.2| 395|Caenorhabditis elegans Hypothetical
protein Y43C5A.6a protein.
Length = 395
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = +1
Query: 232 LESKGSPRSARALEPLSDEPKAREAQVESRLVDSAADFLENYVIQFKMPSSAV 390
+ESK S +++R + ++ A +A + + + D+A + EN+ + K+ SS +
Sbjct: 35 IESKMSAQASRQKKSDQEQRAADQALLNAAIEDNAMEQDENFTVIDKLESSGI 87
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 129 VLNNAQNAATDSKICRFLFGGHRAHRRD*K 40
V+ ++ ++ D ++ +F+ G HR H D K
Sbjct: 637 VIRDSVDSVEDERLAKFVVGNHRTHHPDAK 666
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 26.6 bits (56), Expect = 8.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 63 DAHRTGIYRSWNRWQRF 113
DAHRTG+ R WN + F
Sbjct: 520 DAHRTGVSRWWNSIKAF 536
>AL032631-9|CAA21575.2| 893|Caenorhabditis elegans Hypothetical
protein Y106G6H.7 protein.
Length = 893
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 319 RLVDSAADFLENYVIQFKMPSSAVEGIRRSLEDGRGKKKTIKQLLPL 459
RLV + +E ++ F+ SS + R + + R T+K LL L
Sbjct: 69 RLVKNHQQDVEKCLVSFRDVSSKISNCRERIHNVRNALHTVKSLLEL 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.133 0.361
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,865,410
Number of Sequences: 27780
Number of extensions: 215403
Number of successful extensions: 607
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -