Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D18
(640 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 60 2e-10
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 59 6e-10
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 58 8e-10
SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar... 53 4e-08
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 51 2e-07
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 51 2e-07
SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase |S... 46 3e-06
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 46 5e-06
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 46 5e-06
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 44 2e-05
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 42 8e-05
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 1e-04
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 36 0.004
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.3
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos... 27 2.3
SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family... 27 2.3
SPCC1183.06 |ung1||uracil DNA N-glycosylase Ung1|Schizosaccharom... 26 4.0
SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 26 4.0
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 25 7.0
SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr 1||... 25 9.2
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 25 9.2
SPBC1685.07c |||amino acid transporter |Schizosaccharomyces pomb... 25 9.2
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 60.5 bits (140), Expect = 2e-10
Identities = 39/135 (28%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Frame = +2
Query: 233 AQVAIVGRNVT-KLEKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVN 409
A+V V R++T +LE + + N + +K D++ + S + I FGK+D ++
Sbjct: 30 AKVIAVSRSLTPELETLLIQ---NPDSFVHVKGDVTEVGKAS--IETAIKKFGKLDSVIL 84
Query: 410 NAGMIK-LGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAKGNIINISSNLAKQI 586
NAG+++ + + + ++ E + + N +V++ A PH+ + KG I+ +SS A ++
Sbjct: 85 NAGVLEPIAKIADADINE-WRKLFDINFFSVVETVKYAIPHLRKTKGTIVIVSSGAAVRV 143
Query: 587 STALTAYCISKAGLN 631
A AYC SKA +N
Sbjct: 144 FPAWAAYCCSKAAIN 158
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 58.8 bits (136), Expect = 6e-10
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 2/167 (1%)
Frame = +2
Query: 146 MAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCAANGKKPLIIK 325
M G+V L+ FT+ G +VA G ++ KV + AA L ++
Sbjct: 1 MTVEGRVVLITGAAGGIGKVLCKMFTELGDRVA--GIDIVDPSKV--QDAA-----LALQ 51
Query: 326 ADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQ 505
AD+S D++ T + K I G ID+L+NNAG+ + E E++D ++ LR
Sbjct: 52 ADVSKADQIETAIEKVIQTLGPIDVLINNAGLAD-DTPFEQLSHESWDHDVSLVLRGNYL 110
Query: 506 LTNLATPHIVE--AKGNIINISSNLAKQISTALTAYCISKAGLNHFT 640
PH+ + G+I+NI S + I AY +KAGL + T
Sbjct: 111 TQRYVIPHMAKQGKGGSIVNIGS-VNGHIYLGSPAYSAAKAGLENLT 156
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 58.4 bits (135), Expect = 8e-10
Identities = 36/166 (21%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Frame = +2
Query: 155 NGKVALVXXXXXXXXXXXXXQFTKEG-AQVAIVGRNVTKLEKVAAKCAANGKKPLI-IKA 328
+GK L+ + K ++ + R + +E++A + + + ++ +K
Sbjct: 5 DGKTILITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKL 64
Query: 329 DLSNQDEVSTIVSKTIDAFGKIDILVNNAGM-IKLGSLLEGNLLEAYDTVMATNLRAVIQ 505
D+S+ + ++ F ID+L+NNAG+ + +++ N+ +A T++ TN+ ++
Sbjct: 65 DVSDLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAV-TMITTNVLGMMA 123
Query: 506 LTNLATP-HIVEAKGNIINISSNLAKQISTALTAYCISKAGLNHFT 640
+T P + KG+I+N+ S ++ + YC +K+ L FT
Sbjct: 124 MTRAVLPIFYSKNKGDILNVGSIAGRESYVGGSVYCSTKSALAQFT 169
>SPAC3G9.02 |oar2||3-oxoacyl-[acyl-carrier-protein] reductase Oar2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 52.8 bits (121), Expect = 4e-08
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Frame = +2
Query: 218 FTKEGAQVAIVGRNVTKL-EKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKI 394
++++G Q IVGRN L E + + A G++ + AD+ Q ++ + K+I +I
Sbjct: 21 WSQKGHQCHIVGRNEFHLKETLQSLSVAKGQQHTLTIADV--QSDMKNL--KSIFESVEI 76
Query: 395 DILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAKGN-----IIN 559
D +V+ AG+++ SL + D+++ TNL + I+L+ +A K + I+N
Sbjct: 77 DTVVHAAGVLQ-SSLCVRTSEKEIDSIICTNLVSAIKLSKMAILEWFRNKNSERDRLILN 135
Query: 560 ISSNLAKQISTALTAYCISKAGLNHFT 640
ISS L+ + Y SKAGL FT
Sbjct: 136 ISSRLSTYALPGTSVYAASKAGLESFT 162
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 50.8 bits (116), Expect = 2e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 284 AKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEA 463
AK + + L+ + D++N + V K I FG+ID+L+NNAG + S LE E
Sbjct: 7 AKVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAG-YSVYSPLESTTEEQ 65
Query: 464 YDTVMATNLRAVIQLTNLATPHI-VEAKGNIINISS 568
+ TN+ +++ TP + G IIN+SS
Sbjct: 66 IHNIFNTNVFGALEVIKAITPIFRSQHNGMIINVSS 101
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 50.8 bits (116), Expect = 2e-07
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 284 AKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEA 463
AK + + L+ + D++N + V K I FG+ID+L+NNAG + S LE E
Sbjct: 7 AKVLSRLENVLVTQLDVNNFSSIKKSVEKAISHFGRIDVLLNNAG-YSVYSPLESTTEEQ 65
Query: 464 YDTVMATNLRAVIQLTNLATPHI-VEAKGNIINISS 568
+ TN+ +++ TP + G IIN+SS
Sbjct: 66 IHNIFNTNVFGALEVIKAITPIFRSQHNGMIINVSS 101
>SPAC23D3.11 |ayr1||1-acyldihydroxyacetone phosphate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 46.4 bits (105), Expect = 3e-06
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Frame = +2
Query: 215 QFTKEGAQVAIVGRNVTKLEKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAF--G 388
+F +EG QV R V +++ + G + L K D++++D V V + + F G
Sbjct: 24 KFHQEGFQVLATARQVERMDNLTKA----GLQTL--KLDVTDEDSVRE-VEQEVRKFTNG 76
Query: 389 KIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAKGNIINISS 568
+ L+NNAG ++ ++ E VM N VI++ ++ AKG I+N++S
Sbjct: 77 SLHYLINNAGAPCSAPAIDLDI-EDVSKVMDVNFYGVIRMNKAFQHQLIRAKGTIVNVNS 135
Query: 569 NLAKQISTALTAYCISKAGL 628
++ AY SKA L
Sbjct: 136 LVSYVPFAFNAAYNASKAAL 155
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 46.0 bits (104), Expect = 5e-06
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 5/170 (2%)
Frame = +2
Query: 134 NIL-VMAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCA-ANGK 307
NIL +++ GK A+V F + GA IV N T EK A + A ANG
Sbjct: 12 NILDLLSLKGKNAVVFGGARGIGHAICSVFAEAGANAFIV-YNTTPGEKAAKEIAQANGV 70
Query: 308 KPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATN 487
K K D++ EV ++ F IDI+V N G+ S ++ E + + N
Sbjct: 71 KTYTCKCDVTIPKEVEHAFAEIQKVFDTIDIVVPNNGICTGKSAID-MTYEEFANEINVN 129
Query: 488 LRAVIQLTNLATPHI-VEAKGNIINIS--SNLAKQISTALTAYCISKAGL 628
L V + + A P + G+++ + S + + AY SKAG+
Sbjct: 130 LLGVFNVAHNAGPIFQKQGHGSLVATASMSGVVVNVPQQQCAYNTSKAGV 179
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 46.0 bits (104), Expect = 5e-06
Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 3/165 (1%)
Frame = +2
Query: 143 VMAFNGKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKCAANGKKPLII 322
+ + GK +V F + G V I EK G + +
Sbjct: 16 LFSLKGKNCVVFGAAKGIGFSIATAFAQAGGNVIITYLTTDPTEKAKKLAEETGVQVHTL 75
Query: 323 KADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVI 502
K D+S D V V + F +I ++V NAGM S+L+ E ++ VM N +V
Sbjct: 76 KIDISRSDTVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHE-FEKVMNINTNSVY 134
Query: 503 QLT-NLATPHIVEAKGNIINISSNLAKQISTA--LTAYCISKAGL 628
++ + + GN+I +S A ++ + AYC SKA +
Sbjct: 135 RVAYYMGKIFKKQGFGNLIATASMSATIVNAPQHIAAYCASKAAV 179
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 43.6 bits (98), Expect = 2e-05
Identities = 35/125 (28%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +2
Query: 158 GKVALVXXXXXXXXXXXXXQFTKEGAQVAIVGRNVTKLEKVAAKC--AANGKKPLIIKAD 331
GKVALV + ++GA+V + GRN K +KV + K ++ D
Sbjct: 42 GKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLD 101
Query: 332 LSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQLT 511
L + + V I K+ ILVNNAG++ L + Y+ + TN + T
Sbjct: 102 LLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFEL---TKDGYELQIQTNYLSHYLFT 158
Query: 512 NLATP 526
L P
Sbjct: 159 ELLLP 163
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 41.9 bits (94), Expect = 8e-05
Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Frame = +2
Query: 251 GRNVTKLEKVAAKCAANGKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKL 430
G NV + K L +K D+++ V T FG +DI++NNAG +
Sbjct: 29 GYNVIACSRAPDTITIEHSKLLKLKLDVTDVKSVETAFKDAKRRFGNVDIVINNAGYGLV 88
Query: 431 GSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEA--KGNIINISSNLAKQISTALTA 604
G N+ E + M N V +T A + E+ G I+ ISS S L+
Sbjct: 89 GEFESYNIEEMH-RQMNVNFWGVAYITKEALNLMRESGKGGRILQISSVAGYYPSPCLSM 147
Query: 605 YCISK 619
Y SK
Sbjct: 148 YNASK 152
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 41.1 bits (92), Expect = 1e-04
Identities = 30/113 (26%), Positives = 49/113 (43%)
Frame = +2
Query: 302 GKKPLIIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMA 481
G+ I + L D +V + G ID+LVNN ++ +E E +D
Sbjct: 92 GRNCWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIAYQQVAQSIEDIDDEQWDLTFK 151
Query: 482 TNLRAVIQLTNLATPHIVEAKGNIINISSNLAKQISTALTAYCISKAGLNHFT 640
TN+ + +T A H +++ +I+N SS A L Y +K + FT
Sbjct: 152 TNIFSFFWVTKAAISH-MKSGSSIVNCSSINAYVGRPDLLDYTSTKGAITAFT 203
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 36.3 bits (80), Expect = 0.004
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 317 IIKADLSNQDEVSTIVSKTIDAFGKIDILVNNAGMIKLGSLLEGNLLEAYDTVMATNLRA 496
IIK D+S+ + + + A GK+D+L N+G+ + + + +++ TN+
Sbjct: 58 IIKLDISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLG 117
Query: 497 VIQLTNLATPHIVEAKGNIINISSNLAKQISTAL----TAYCISKAGLN 631
I + P + + + II +S+L + + Y SKA LN
Sbjct: 118 PIHVYQAFYPLVKKGESKIIVFTSSLVGSMGAFFPFNQSGYGQSKAALN 166
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.3
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Frame = -2
Query: 303 PLAAHFAATFSSFVTFLPTIATWAPSLVNCMAVAAPIPELP-PVTRATLPLKAITRMLLR 127
PLA T +S V + T T P + IP PVT L T
Sbjct: 444 PLATTNCTTSTS-VPYTSTPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTTNCTTSTSV 502
Query: 126 KFVTSNQISVTTHLIMSGRP-NATHVTNWNLSIETTYFYSSS 4
+ TS ++ + + I S P +T VT N + T+ Y+S+
Sbjct: 503 PY-TSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTST 543
Score = 27.9 bits (59), Expect = 1.3
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = -2
Query: 279 TFSSFVTFLPTIATWAP-SLVNCMAVAAPIPELPPVTRATLPLKAITRMLLRKFVTSNQI 103
T S++ T T P + NC + + PVT L T + TS +
Sbjct: 510 TSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPY-TSTPV 568
Query: 102 SVTTHLIMSGRP-NATHVTNWNLSIETTYFYSSS 4
+ + + I S P +T VT N + T+ Y+S+
Sbjct: 569 TSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTST 602
Score = 26.2 bits (55), Expect = 4.0
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Frame = -2
Query: 279 TFSSFVTFLPTIATWAP-SLVNCMAVAAPIPELPPVTRATLPLKAITRMLLRKFVTSNQI 103
T S+ + + T T P + NC + PVT + + + T + T+N
Sbjct: 474 TTSTSIPYTSTPVTSTPLTTTNCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCT 533
Query: 102 SVTTHLIMSGRPNATHVTNWNLSIETTYFYSSS 4
+ T+ L S +T + N + T+ Y+S+
Sbjct: 534 TSTSVLYTSTPVTSTPLATTNCTTSTSVPYTST 566
>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 2.3
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 166 NFAVESHNKNVVEEICNLQSNLGHDSL 86
N+ ++ N NV+ +IC SN HDSL
Sbjct: 97 NWYLKERNINVLSDICFPLSNNAHDSL 123
>SPBC16H5.14c ||SPBC21H7.08|short chain dehydrogenase DHRS family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 27.1 bits (57), Expect = 2.3
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +2
Query: 401 LVNNAGMIKLGSLLEGNLLEAYDTVMATNLRAVIQLTNLATPHIVEAKG-NIINISSNLA 577
L+N A + LL + E TN+ + +T+ P +++ +++NI+S+LA
Sbjct: 110 LINAAAIAPKNHLLSISRQEL-QKCFETNVIGQLAITSALFPLLLQDPNPHVVNIASSLA 168
Query: 578 KQISTALTAYCISKAGL 628
+ + AY SKA L
Sbjct: 169 YFSAMGVGAYSSSKAAL 185
>SPCC1183.06 |ung1||uracil DNA N-glycosylase
Ung1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 342 WLDKSALMINGFLPLAAHFAATFS 271
W D+ LM+N L + AH AA+ S
Sbjct: 192 WADQGILMLNASLTVRAHQAASHS 215
>SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 457
Score = 26.2 bits (55), Expect = 4.0
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 227 EGAQVAIVGRNVTKLEKVAAKCAANGKKPLIIKADLSNQDEV--STIVSKTIDAFGKIDI 400
+ A + I+G +T + A G+K L+++ D+S D + + I+A KI I
Sbjct: 4 QDADIIIIGAGITGCA-LGAALGRQGRKVLVLERDMSEPDRIVGELLQPGGIEALEKIGI 62
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 25.4 bits (53), Expect = 7.0
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = -2
Query: 396 SIFPKASIVLLTIVLTSSWLDKSALMI 316
++FP+ +L+ ++LT W K++++I
Sbjct: 1552 NVFPEVVDLLVRLILTEDWETKASIVI 1578
>SPAC8E11.04c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 224
Score = 25.0 bits (52), Expect = 9.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 315 NGFLPLAAHFAATFSSFVTFLPTIATW 235
+GFLPLA+ F + S +P + T+
Sbjct: 140 SGFLPLASKFPSALSRVAKEIPILLTY 166
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 371 TIDAFGKIDILVNNAGMIKLGSLLEG 448
T+DA + LV KL SLLEG
Sbjct: 52 TVDALDNVSALVEGKVSSKLSSLLEG 77
>SPBC1685.07c |||amino acid transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 25.0 bits (52), Expect = 9.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 398 ILVNNAGMIKLGSLLEGNLLEAYD 469
+LV G + GSL GN++ YD
Sbjct: 253 LLVAITGYLSFGSLASGNIIAMYD 276
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,356,291
Number of Sequences: 5004
Number of extensions: 42256
Number of successful extensions: 125
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 122
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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