Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D17
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   2.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   3.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         20   6.4  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    20   8.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 170 LLPKTPARAAFTFKLL 123
           LLPKTP      +KLL
Sbjct: 47  LLPKTPLPLTLLYKLL 62


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 170 LLPKTPARAAFTFKLL 123
           LLPKTP      +KLL
Sbjct: 3   LLPKTPLPLTLLYKLL 18


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 195 KATHEETQQQKTSKEVILLCQKAVLND 275
           K +H  +       E+ILLC+K    D
Sbjct: 245 KLSHCNSYVDGGRNEIILLCEKVAKED 271


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 33  QREESTDDRLRQIQADVG 86
           Q+    D+RL  +QA +G
Sbjct: 68  QQHSERDERLAHVQAQLG 85


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 249 LCQKAVLNDWDKLKNY 296
           LC  ++ N W++ ++Y
Sbjct: 55  LCIWSIFNKWNQFRSY 70


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,316
Number of Sequences: 336
Number of extensions: 882
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)