Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D16
         (622 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   4.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   6.3  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   8.3  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 416 FGQDCNGDGVVN 451
           FGQD N DGV+N
Sbjct: 434 FGQDLNQDGVMN 445


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +2

Query: 416 FGQDCNGDGVVN 451
           FGQD N DGV+N
Sbjct: 434 FGQDLNQDGVMN 445


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = +2

Query: 125 ILIVGVCLADVYDVPQVNQAPVTEVCLGC 211
           ++I+G    +++++P+ N  P+  V L C
Sbjct: 147 LVIIGNIAMELWNMPRENIEPLPNVILAC 175


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 22  ILHAIFYIHLQLLFYFKYFLIRH 90
           IL  +F+   ++L YF  F+  H
Sbjct: 215 ILQTVFFTVPRVLMYFDIFITEH 237


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -3

Query: 257 LHT*CLACSQTQ 222
           LHT C  CS+TQ
Sbjct: 71  LHTECSKCSETQ 82


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 169 RNIINISKTHADNQNYGTELNHGGRHYDGLKNI 71
           R  ++    +  NQ Y T+  H  +HY   +N+
Sbjct: 279 RGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNM 311


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 169 RNIINISKTHADNQNYGTELNHGGRHYDGLKNI 71
           R  ++    +  NQ Y T+  H  +HY   +N+
Sbjct: 227 RGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNM 259


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = -1

Query: 169 RNIINISKTHADNQNYGTELNHGGRHYDGLKNI 71
           R  ++    +  NQ Y T+  H  +HY   +N+
Sbjct: 410 RGSMHFPNQYQMNQEYRTDRKHTQQHYQMNQNM 442


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 288 HVIWNKPQASPSHLV 244
           H++W+KP   P++ +
Sbjct: 291 HLMWSKPDLIPNYYI 305


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +3

Query: 180 KHR*RKYVSVASARLCLAASKALS 251
           KHR +++V +  + L L  + ALS
Sbjct: 4   KHRKQRFVDIGDSLLTLKLTHALS 27


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 173 VNQAPVTEVCLGCICQAVSGCKQGTKCEG 259
           +NQ   T +  G  C  +SG  +   C G
Sbjct: 429 LNQHLQTGLPAGSYCDVISGNAENGSCSG 457


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 173 VNQAPVTEVCLGCICQAVSGCKQGTKCEG 259
           +NQ   T +  G  C  +SG  +   C G
Sbjct: 430 LNQHLQTGLPAGSYCDVISGNAENGSCSG 458


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = -3

Query: 215 RCNRDILPLPVLGLLEEHHKHQQDTRRQSK 126
           R N  IL L  +GL     KHQ+   R  +
Sbjct: 3   RLNITILLLLTIGLAAAARKHQKQESRDEE 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,327
Number of Sequences: 336
Number of extensions: 3443
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)