Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D16
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical ... 83 2e-16
U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical pr... 77 8e-15
AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical ... 72 3e-13
AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical ... 50 2e-06
U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81132-5|CAB03436.1| 345|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical p... 29 2.0
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 29 3.5
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 28 4.7
Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical p... 27 8.2
>AF067611-3|AAC19179.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.3 protein.
Length = 139
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/119 (38%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +2
Query: 200 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTL-NGQSPDAPDAYPNC 364
CL CIC SGCK C D +CG + I PY+ D G+PT +G++ +A A+ C
Sbjct: 20 CLHCICMRESGCKP-IGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEA--AWKRC 76
Query: 365 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGCKGDLPFNYVNIFNQC 541
AND CA T V+NY N++ C G G C H G GCK Y N C
Sbjct: 77 ANDLSCATTCVENYYNRYKSQCAGTGQGACEVMARNHNGGPQGCKHSGTLGYWNGIKSC 135
>U41547-6|AAA83197.1| 139|Caenorhabditis elegans Hypothetical
protein F22A3.6a protein.
Length = 139
Score = 77.4 bits (182), Expect = 8e-15
Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 5/125 (4%)
Frame = +2
Query: 182 APVTEVCLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTLN-GQSPDAP 346
A V+ CL CIC SGCK C D +CG + I Y+ D G+PT G++ +A
Sbjct: 14 AYVSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEA- 71
Query: 347 DAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGCKGDLPFNYVN 526
A+ CA+D CA T V+NY N++ CNG G+ C H G GC Y N
Sbjct: 72 -AWKRCADDLNCATTCVENYYNRYKSQCNGLGMGACQIMSRNHNGGPRGCHNANTLAYWN 130
Query: 527 IFNQC 541
C
Sbjct: 131 GVKSC 135
>AF067611-4|AAC19181.1| 139|Caenorhabditis elegans Hypothetical
protein C45G7.2 protein.
Length = 139
Score = 72.1 bits (169), Expect = 3e-13
Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +2
Query: 200 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKP-TLNGQSPDAPDAYPNC 364
CL CIC SGCK C D +CG + I PY+ D G+P +G+S + A+ C
Sbjct: 20 CLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIPYYEDCGQPGKKHGESTEV--AWKRC 76
Query: 365 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGCKGDLPFNYVNIFNQC 541
A+D CA V+NY N++ +C G G C H G GC Y + C
Sbjct: 77 ADDLKCATNCVENYYNRYKHECAGTGQGACEVMARNHNGGPRGCHASGTLGYWKGVHSC 135
>AF067611-5|AAC19180.1| 145|Caenorhabditis elegans Hypothetical
protein C45G7.1 protein.
Length = 145
Score = 49.6 bits (113), Expect = 2e-06
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 269 GLFHITWPYWADAGKP-TLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGV 445
G F I PY+ D G+P G+S ++ A+ CA+D CA T + NY +++ CNG G+
Sbjct: 28 GNFVIKLPYYIDCGEPGKQRGESTES--AWKRCADDLDCAETCMMNYYHRYKSQCNGLGM 85
Query: 446 VNC 454
C
Sbjct: 86 SEC 88
>U58747-4|AAF99902.2| 159|Caenorhabditis elegans Hypothetical
protein C55F2.2 protein.
Length = 159
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Frame = +2
Query: 125 ILIVGVCLADVYDVPQVNQAPVTEVCLGCICQAVSGCKQGTKCEGD-----ACGLFHITW 289
+ ++ + ++ + + ++ CL +C SGC C D CG F +
Sbjct: 6 VTVISLLVSVTHQLLMFDKVEDDHPCLLAMCDQDSGCVP-LGCSVDQFDRIGCGYFRLNI 64
Query: 290 PYWADAGKPTLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMA 469
+ +P + + +A+ NCA D C+A+ ++ KF C G C
Sbjct: 65 YQFQQCYQPGKKDEDTEN-EAWMNCAQDYQCSASCIRTLATKFRVKCYGKS--ECETIAR 121
Query: 470 IHKLGGYGCK 499
IH G GC+
Sbjct: 122 IHDGGANGCR 131
>Z81132-5|CAB03436.1| 345|Caenorhabditis elegans Hypothetical
protein T26E4.7 protein.
Length = 345
Score = 32.3 bits (70), Expect = 0.29
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 318 VGLPAS-AQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPR 202
VG PAS Q G W P A P+ L C ++ W PR
Sbjct: 270 VGAPASPVQMGRSQWYNPLAGPTDLEKCGPHNSTWSYDPR 309
>Z81109-12|CAE17917.2| 364|Caenorhabditis elegans Hypothetical
protein R10D12.17 protein.
Length = 364
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/36 (33%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +2
Query: 56 YYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADVY 160
+ FI+NI +I+ ++ ++I +L++GVC+A++Y
Sbjct: 21 FSFIINIVHLLILTRKYMRTASIYVLLIGVCIAELY 56
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -2
Query: 327 PFN-VGLPASAQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPRHTSVTG 184
PF V LP SA +G + +KP A P H P +A++ P +S++G
Sbjct: 542 PFTPVELPNSADFGPLTASKPHAVPFH--PSEMCLSAFRKVPESSSISG 588
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 347 DAYPNCAND-PYCAATAVQNYMNKFGQ 424
DA P+CAND C A +Q ++N + Q
Sbjct: 161 DAVPDCANDRSICNAVGLQTFVNTYCQ 187
>Z81119-5|CAB03333.1| 386|Caenorhabditis elegans Hypothetical
protein T10H4.6 protein.
Length = 386
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 29 TPFFISIFNYYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADV 157
T F+ F + +NI +++ ++ AI IL++G+CLAD+
Sbjct: 37 TNVFMQFFTVF--INILHLIVLFQKELRTGAIYILMIGICLADI 78
>Z81513-10|CAB04183.1| 247|Caenorhabditis elegans Hypothetical
protein F26D2.13 protein.
Length = 247
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = +2
Query: 347 DAYPNCANDP-YCAATAVQNYMNK 415
DA +CANDP C +QN++N+
Sbjct: 157 DAVTDCANDPSICNMVGMQNFVNQ 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,214,834
Number of Sequences: 27780
Number of extensions: 305063
Number of successful extensions: 831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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