BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D15
(381 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061320-1|AAL28868.1| 65|Drosophila melanogaster LD23674p pro... 98 3e-21
AE014298-1341|AAF46503.2| 65|Drosophila melanogaster CG2998-PA... 98 3e-21
AE014297-4512|AAF56992.1| 64|Drosophila melanogaster CG15527-P... 88 3e-18
BT030166-1|ABN49305.1| 73|Drosophila melanogaster IP17744p pro... 51 6e-07
BT010207-1|AAQ23525.1| 1248|Drosophila melanogaster RH63339p pro... 31 0.38
AF251479-1|AAF68455.1| 1248|Drosophila melanogaster neuroligin p... 31 0.38
AE014134-1184|AAF52450.2| 1248|Drosophila melanogaster CG13772-P... 31 0.38
>AY061320-1|AAL28868.1| 65|Drosophila melanogaster LD23674p
protein.
Length = 65
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2
Query: 38 MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 196
MDKP V ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53
>AE014298-1341|AAF46503.2| 65|Drosophila melanogaster CG2998-PA
protein.
Length = 65
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/53 (86%), Positives = 50/53 (94%)
Frame = +2
Query: 38 MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 196
MDKP V ARV+KVLGRTGSQGQCTQVKVEF+GE +RQIIRNVKGPVR+GDILT
Sbjct: 1 MDKPVVWARVMKVLGRTGSQGQCTQVKVEFLGEQNRQIIRNVKGPVREGDILT 53
>AE014297-4512|AAF56992.1| 64|Drosophila melanogaster CG15527-PA
protein.
Length = 64
Score = 88.2 bits (209), Expect = 3e-18
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +2
Query: 38 MDKPNVLARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDILT 196
MDKP ARVV++LGRTGSQGQCTQV+VEF+G+ SRQIIRNVKGPVR GDIL+
Sbjct: 1 MDKPQY-ARVVEILGRTGSQGQCTQVRVEFLGDQSRQIIRNVKGPVRVGDILS 52
>BT030166-1|ABN49305.1| 73|Drosophila melanogaster IP17744p
protein.
Length = 73
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/44 (47%), Positives = 32/44 (72%)
Frame = +2
Query: 59 ARVVKVLGRTGSQGQCTQVKVEFIGETSRQIIRNVKGPVRDGDI 190
ARV+K+L R G++G T+V+V+ + + Q +R VKGPVR GD+
Sbjct: 7 ARVIKILNRIGARGILTEVRVQLVDQPKMQFMRTVKGPVRLGDV 50
>BT010207-1|AAQ23525.1| 1248|Drosophila melanogaster RH63339p
protein.
Length = 1248
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 99 PCDPVRPSTFTTRARTLGLSILNYISSFEKS 7
P P+ P +TT+ R +G +L Y+S+F K+
Sbjct: 661 PMSPLFPHNYTTQERQIGRLMLRYLSNFAKT 691
>AF251479-1|AAF68455.1| 1248|Drosophila melanogaster neuroligin
protein.
Length = 1248
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 99 PCDPVRPSTFTTRARTLGLSILNYISSFEKS 7
P P+ P +TT+ R +G +L Y+S+F K+
Sbjct: 661 PMSPLFPHNYTTQERQIGRLMLRYLSNFAKT 691
>AE014134-1184|AAF52450.2| 1248|Drosophila melanogaster CG13772-PA
protein.
Length = 1248
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 99 PCDPVRPSTFTTRARTLGLSILNYISSFEKS 7
P P+ P +TT+ R +G +L Y+S+F K+
Sbjct: 661 PMSPLFPHNYTTQERQIGRLMLRYLSNFAKT 691
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,245,019
Number of Sequences: 53049
Number of extensions: 281271
Number of successful extensions: 534
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -