Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D14
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    26   0.25 
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   4.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   5.4  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.4  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.4  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -3

Query: 362 TPSGHNIRIVHRHAYYFRNALTFH-LISVLHVSRQMSLRTPRSKRSRYSKQDNF 204
           T +GH I+ + +  Y    +  FH L  + ++        PR   +   KQDNF
Sbjct: 140 TLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQDNF 193


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 VNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGY 272
           + T  + A   VV++   GAF  G    + P Y
Sbjct: 103 IYTTHVNASFDVVVYIHSGAFMTGYGSFYQPDY 135


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +3

Query: 228 GAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVND 338
           G F  G   T   GY  +  K K  G   IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -1

Query: 406 GSASIRTFPLVLCWAPQAAITYGSFTDTHTISETP 302
           GS  ++T P    W P+ + +    T T + +E P
Sbjct: 423 GSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAP 457


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 VNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGY 272
           + T  + A   VV++   GAF  G    + P Y
Sbjct: 103 IYTTHVNASFDVVVYIHGGAFMTGYGSFYQPDY 135


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 VNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGY 272
           + T  + A   VV++   GAF  G    + P Y
Sbjct: 103 IYTTHVNASFDVVVYIHGGAFMTGYGSFYQPDY 135


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 VNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGY 272
           + T  + A   VV++   GAF  G    + P Y
Sbjct: 103 IYTTHVNASFDVVVYIHGGAFMTGYGSFYQPDY 135


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 174 VNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGY 272
           + T  + A   VV++   GAF  G    + P Y
Sbjct: 103 IYTTHVNASFDVVVYIHGGAFMTGYGSFYQPDY 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,909
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)