Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D13
(415 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 63 1e-11
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 55 5e-09
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 52 3e-08
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 50 1e-07
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 47 1e-06
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 43 2e-05
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 43 2e-05
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 41 7e-05
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 40 1e-04
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 36 0.002
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 34 0.010
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 32 0.031
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 31 0.094
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 1.5
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 27 1.5
SPAC1786.03 |cut11|SPAC24C9.01|integral membrane nucleoporin|Sch... 26 2.7
SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomy... 25 3.5
SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subuni... 25 6.1
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 6.1
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 24 8.1
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 24 8.1
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 24 8.1
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 24 8.1
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 24 8.1
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 24 8.1
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 63.3 bits (147), Expect = 1e-11
Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 8/125 (6%)
Frame = +3
Query: 30 HENVFPFKCDV--CPYQGRTMDLLKVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMRH 197
H N PF CD C LK+HKR H KPF C C T +L +H+
Sbjct: 47 HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHI-E 105
Query: 198 VHSTARPHKCNY--CEKAFSYQHDMKRHVKDIHLRQGTVECDV--CYKKFNTKKILQGHR 365
VH +P+ C + C++ FS ++ H+ H C C +F TK+ LQ H
Sbjct: 106 VHRKPKPYACTWEGCDECFSKHQQLRSHISACHTHLLPYPCTYQDCELRFATKQKLQNHV 165
Query: 366 WKIHK 380
+ H+
Sbjct: 166 NRAHE 170
Score = 53.2 bits (122), Expect = 2e-08
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Frame = +3
Query: 63 CPYQ--GRTMD---LLKVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMRHVHSTARPH 221
CPY+ G+ LL+ H R+H ++PF C T C KA S+L H R H+ +P
Sbjct: 25 CPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKR-CHTNVKPF 83
Query: 222 KCNY--CEKAFSYQHDMKRHVKDIHLRQGTVEC--DVCYKKFNTKKILQGH 362
C+Y C+ F Q ++RH+ ++H + C + C + F+ + L+ H
Sbjct: 84 SCHYDGCDAQFYTQQHLERHI-EVHRKPKPYACTWEGCDECFSKHQQLRSH 133
Score = 53.2 bits (122), Expect = 2e-08
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Frame = +3
Query: 30 HENVFPFKC--DVCPYQGRTMDLLKVHKRSHLVDKPFKCTQ--CPKATTTASNLSKHMRH 197
H NV PF C D C Q T L+ H H KP+ CT C + + L H+
Sbjct: 77 HTNVKPFSCHYDGCDAQFYTQQHLERHIEVHRKPKPYACTWEGCDECFSKHQQLRSHISA 136
Query: 198 VHSTARPHKCNY--CEKAFSYQHDMKRHVKDIHLRQGTVECD----VCYKKFNTKKILQG 359
H+ P+ C Y CE F+ + ++ HV H + + C V ++ F LQ
Sbjct: 137 CHTHLLPYPCTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHESCVGHEGFEKWSQLQN 196
Query: 360 HRWKIH 377
H + H
Sbjct: 197 HIREAH 202
Score = 44.8 bits (101), Expect = 5e-06
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Frame = +3
Query: 138 CTQCPKATTTASNLSKHMRHVHSTARPHKCNY------CEKAFSYQHDMKRHVKDIHLRQ 299
C+ C + TA++L H+ +H T + Y C+K+F+ +K+H+ IH
Sbjct: 206 CSICGRQFKTAAHLRHHVV-LHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 300 GTVECDVCYKKFNTKKILQGH 362
CD C KF K +LQ H
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRH 285
Score = 44.0 bits (99), Expect = 9e-06
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +3
Query: 54 CDVCPYQGRTMDLLKVHKRSHLVD----KPFKCTQ--CPKATTTASNLSKHMRHVHSTAR 215
C +C Q +T L+ H H K + C C K+ T +S L KH+ +H
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 216 PHKCNYCEKAFSYQHDMKRHVK 281
C+ C F Y+H ++RH++
Sbjct: 266 AFHCDSCGTKFGYKHMLQRHLE 287
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 54.8 bits (126), Expect = 5e-09
Identities = 26/72 (36%), Positives = 38/72 (52%)
Frame = +3
Query: 147 CPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCY 326
C K T A NL HM + H+ RP +C+ C+K+F+ QHD +RH + +H C C
Sbjct: 577 CNKRFTRAYNLKSHM-NTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCN 634
Query: 327 KKFNTKKILQGH 362
++F L H
Sbjct: 635 QRFARMDALNRH 646
Score = 38.3 bits (85), Expect = 5e-04
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 93 LKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKR 272
LK H +H +PF+C+ C K+ + +H +H+ + C C + F+ + R
Sbjct: 587 LKSHMNTHTNYRPFQCSICKKSFARQHDKRRH-EQLHTGIKAFACVTCNQRFARMDALNR 645
Query: 273 HVK 281
H K
Sbjct: 646 HYK 648
Score = 32.7 bits (71), Expect = 0.023
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +3
Query: 30 HENVFPFKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMR 194
H N PF+C +C + H++ H K F C C + L++H +
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYK 648
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 52.4 bits (120), Expect = 3e-08
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 93 LKVHKRSHLVDKP-FKCT--QCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHD 263
LK R+H + P F CT CPK+ T +L +H R H + C++C +AF+
Sbjct: 12 LKKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHER-THENVKAFSCSFCNRAFARSDV 70
Query: 264 MKRHVKDIHLRQ 299
+ RHV+ +HL++
Sbjct: 71 LNRHVQQMHLQK 82
Score = 34.3 bits (75), Expect = 0.008
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 63 CPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVH 203
CP + L+ H+R+H K F C+ C +A + L++H++ +H
Sbjct: 33 CPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRHVQQMH 79
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 50.0 bits (114), Expect = 1e-07
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +3
Query: 147 CPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCY 326
C K N+ H++ H + RP++C+ C+ F HD+KRH++ IH C+ C
Sbjct: 450 CNKRIARKYNVESHIQ-THLSDRPYRCDLCKAGFVRHHDLKRHLR-IHENGRPYVCE-CL 506
Query: 327 KKFNTKKILQGHR 365
K+FN L H+
Sbjct: 507 KRFNRLDALNRHK 519
Score = 44.8 bits (101), Expect = 5e-06
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRH 275
H ++HL D+P++C C +L +H+R +H RP+ C C K F+ + RH
Sbjct: 463 HIQTHLSDRPYRCDLCKAGFVRHHDLKRHLR-IHENGRPYVCE-CLKRFNRLDALNRH 518
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 47.2 bits (107), Expect = 1e-06
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 132 FKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVE 311
F C QC K T NL++H + HS A P C YCE + +KRH++ H + +E
Sbjct: 31 FPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDKSVIE 89
Score = 34.7 bits (76), Expect = 0.006
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 213 RPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRWKIHKIK 386
R C+ C K F+ ++ RH K H + + C C K K +L+ H + H K
Sbjct: 29 RVFPCDQCAKRFTRHENLTRH-KACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHNDK 85
Score = 30.3 bits (65), Expect = 0.12
Identities = 14/53 (26%), Positives = 21/53 (39%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHS 206
F CD C + + L HK H +P C C L +H++ H+
Sbjct: 31 FPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHN 83
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 43.2 bits (97), Expect = 2e-05
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 126 KPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNY--CEKAFSYQHDMKRHVKDIH 290
+P+KC C KA + ++H+R H+ +PH C + C K FS ++ RH + IH
Sbjct: 24 RPYKCPLCTKAFYRLEHQTRHIR-THTGEKPHVCTFPGCAKRFSRSDELTRHAR-IH 78
Score = 35.9 bits (79), Expect = 0.002
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PFKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMRHVHSTARP 218
P+KC +C ++ H R+H +KP CT C K + + L++H R +H+ A
Sbjct: 25 PYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHAR-IHTNANS 83
Query: 219 HK 224
+
Sbjct: 84 RR 85
Score = 33.5 bits (73), Expect = 0.013
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +3
Query: 162 TTASNLSKHMRHVHS--TARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDV--CYK 329
TTA+ K R + RP+KC C KAF RH++ H + C C K
Sbjct: 5 TTATTTGKPSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIR-THTGEKPHVCTFPGCAK 63
Query: 330 KFNTKKILQGHRWKIHKIKGERQ 398
+F+ L H +IH R+
Sbjct: 64 RFSRSDELTRHA-RIHTNANSRR 85
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 42.7 bits (96), Expect = 2e-05
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +3
Query: 57 DVCPYQGRTMD---LLKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMRHVH--STAR 215
D CP +G L H RSH +KPF C+ +C ++ T + L+KHMR VH T R
Sbjct: 78 DDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVHEADTLR 137
Query: 216 P 218
P
Sbjct: 138 P 138
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 41.1 bits (92), Expect = 7e-05
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 126 KPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRH 275
K F C +C K + +L +H+R +H++ +P C C K FS + ++++H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQH 469
Score = 35.1 bits (77), Expect = 0.004
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 225 CNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRWKIH 377
C C K F ++RH++ +H + C +C K+F+ + L+ H ++H
Sbjct: 425 CPECSKKFKRSEHLRRHIRSLHTSEKPFVC-ICGKRFSRRDNLRQHE-RLH 473
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 40.3 bits (90), Expect = 1e-04
Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +3
Query: 132 FKCTQCPKATTTASNLSKHMRHVHSTARPHKCNY--CEKAFSYQHDMKRHVKDIH 290
++CT+C + + S+L H + H+ RP C+Y C KAF+ + +M+RH + IH
Sbjct: 468 YRCTECLQGFSRPSSLKIHT-YSHTGERPFVCDYAGCGKAFNVRSNMRRHQR-IH 520
Score = 35.5 bits (78), Expect = 0.003
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMR 194
++C C LK+H SH ++PF C C KA SN+ +H R
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQR 518
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 36.3 bits (80), Expect = 0.002
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Frame = +3
Query: 33 ENVFPFKCDVCPYQGRTMDLLKVHKRSHLVDKPFKC-------TQCPKATTTASNLSKHM 191
+ V + C+ C ++ LK H RSH +KPF C T C + + L +H
Sbjct: 65 QKVKQYVCETCTRAFARLEHLKRHIRSHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRHQ 124
Query: 192 RHVHSTARPHK 224
+ +H +P +
Sbjct: 125 QKIHRNPQPRR 135
Score = 34.7 bits (76), Expect = 0.006
Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Frame = +3
Query: 129 PFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTV 308
P T K +++ K + + C C +AF+ +KRH++ H +
Sbjct: 40 PSSVTSNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRHIRS-HTNEKPF 98
Query: 309 ECDV-------CYKKFNTKKILQGHRWKIHKIKGERQGR 404
C C ++F+ + +L H+ KIH+ R+ R
Sbjct: 99 TCSEIDGLPTGCGRQFSRRDLLLRHQQKIHRNPQPRRRR 137
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 33.9 bits (74), Expect = 0.010
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Frame = +3
Query: 21 RGIHENVFPFKCDV--CPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMR 194
R E +KCD C + + H RSH K F C C + T + L++H+
Sbjct: 8 RAYQEGDIRYKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVN 67
Query: 195 HVH 203
H
Sbjct: 68 QKH 70
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 32.3 bits (70), Expect = 0.031
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMR 194
++C C + H RSH +KPF+C+ C K T L +H+R
Sbjct: 4 YECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVR 54
Score = 30.3 bits (65), Expect = 0.12
Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 213 RPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDV--CYKKFNTKKILQGH 362
+ ++C +C++ F Q RH++ H + EC C K+F + L H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRS-HTGEKPFECSYPSCKKRFTRRDELIRH 52
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 30.7 bits (66), Expect = 0.094
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 20/80 (25%)
Frame = +3
Query: 117 LVDKPFKCT--QCPKATTTASNLSKHMRHVHSTA------------------RPHKCNYC 236
+VDKP+KC C KA + L H H H + +P++C C
Sbjct: 345 VVDKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPITTPTPAPIPHQGFVVENKPYRCEVC 404
Query: 237 EKAFSYQHDMKRHVKDIHLR 296
K + + +K H HL+
Sbjct: 405 SKRYKNLNGLKYHRTHSHLQ 424
Score = 26.6 bits (56), Expect = 1.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVH 203
H+ + +KP++C C K + L H H H
Sbjct: 389 HQGFVVENKPYRCEVCSKRYKNLNGLKYHRTHSH 422
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 26.6 bits (56), Expect = 1.5
Identities = 21/87 (24%), Positives = 41/87 (47%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKC 227
F C+VC + + + HK+S +K K Q +TT SN ++ + + AR
Sbjct: 243 FYCEVCQKFFGKITVFEAHKKSKAHNKAVKRMQSSSPSTT-SNTNEKQKGPKAIARIE-- 299
Query: 228 NYCEKAFSYQHDMKRHVKDIHLRQGTV 308
+K S D+++ ++ +R+ T+
Sbjct: 300 FLIKKLTSLLDDVRKDTRENVVRRQTL 326
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.6 bits (56), Expect = 1.5
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 96 KVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMRHVH 203
++H R HL + C + C K + ++ KH++H H
Sbjct: 1050 EMHLRGHLNNIRLNCEVSNCKKCFSNYEDMFKHLQHSH 1087
>SPAC1786.03 |cut11|SPAC24C9.01|integral membrane
nucleoporin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 350 YFFGIK-FFITYVAFNRTLSQMYVFYMPLHVVLVRERFLA 234
Y F K FF+ Y+ F ++S + +FY+ H +R +++A
Sbjct: 101 YDFSPKSFFLVYLTFAVSVSCLCLFYIKGHASSIRLQWIA 140
>SPAPB1A10.02 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 336
Score = 25.4 bits (53), Expect = 3.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 204 STARPHKCNYCEKAFSYQ 257
ST PH + C+KAF +Q
Sbjct: 311 STQNPHSSSTCKKAFCFQ 328
>SPCC18.07 |rpc53||DNA-directed RNA polymerase III complex subunit
Rpc53|Schizosaccharomyces pombe|chr 3|||Manual
Length = 330
Score = 24.6 bits (51), Expect = 6.1
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -3
Query: 164 SRRLWTLGTFER 129
S+R+W LG+FER
Sbjct: 311 SKRIWNLGSFER 322
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 24.6 bits (51), Expect = 6.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = -2
Query: 204 YGRAACASKDYLL*SSPLDIGYI*TVYPPNGISCEPLASPLS 79
Y A+ D L + L IG++ P G++ +PLS
Sbjct: 638 YRETTIATPDLLAKNKELSIGFVTATLPVGGVTIGITVTPLS 679
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 24.2 bits (50), Expect = 8.1
Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -2
Query: 267 SCRVGKRTLSRSNCTYA--ALQCY 202
+C V KRTL R+N T + QCY
Sbjct: 560 ACAVVKRTLERNNITASPECQQCY 583
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 24.2 bits (50), Expect = 8.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 113 GSLVNL*QVHCPSLVRTNVALKRKYVFVYTPTT 15
G L L VH + +T ALK +Y F T T+
Sbjct: 242 GCLATLTSVHANASAQTVDALKHRYGFSLTTTS 274
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 24.2 bits (50), Expect = 8.1
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 132 TVYPPNGISCEPLASPLSVLGKD 64
T+Y P+ ++ PL S V G+D
Sbjct: 434 TIYQPSAVASHPLKSEFCVGGED 456
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 24.2 bits (50), Expect = 8.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 121 WINRSNVPNVQRRR 162
WINR +VP +RR
Sbjct: 328 WINRQSVPRASKRR 341
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 24.2 bits (50), Expect = 8.1
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -2
Query: 123 PPNGISCEPLASPLSVLGKDK 61
PPNG+ + A LS LGK K
Sbjct: 260 PPNGLVYQSYAIALSSLGKHK 280
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 24.2 bits (50), Expect = 8.1
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +3
Query: 105 KRSHLVDKPFKCTQCPKATTTASNLSKHMRHVH 203
K+ ++ + F+C +C S L+ H R H
Sbjct: 130 KQPNMPNATFRCDKCDMMFVKQSGLTNHKRTYH 162
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,907,777
Number of Sequences: 5004
Number of extensions: 40141
Number of successful extensions: 155
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 144287194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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