Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D13
(415 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 48 3e-06
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 46 9e-06
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 45 3e-05
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 43 8e-05
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 40 8e-04
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 39 0.001
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 38 0.003
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 37 0.006
09_04_0155 - 15185985-15186755,15187049-15187236,15187479-151875... 37 0.006
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 37 0.006
03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447 37 0.007
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 36 0.013
09_02_0366 + 7941550-7942161,7942230-7942775 36 0.017
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 34 0.052
12_02_0916 - 24271151-24271894 26 0.084
11_08_0067 - 28135216-28135728 33 0.090
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 33 0.090
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850... 33 0.12
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 33 0.12
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 33 0.12
01_01_0990 + 7847066-7847478,7847713-7848679 33 0.12
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 32 0.16
03_06_0063 - 31391870-31392679 25 0.18
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 31 0.28
04_04_0733 + 27639581-27641257 31 0.28
02_05_0201 + 26687369-26689228 31 0.36
01_06_1412 - 37140654-37141088,37141549-37142214 31 0.48
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 31 0.48
07_03_1165 - 24459156-24460139 30 0.64
02_05_0473 + 29319824-29322511,29322659-29322820,29324133-293242... 30 0.64
02_05_0202 + 26708049-26709074 30 0.84
01_05_0421 + 21990034-21990392,21991691-21992681 30 0.84
06_03_0743 + 24069752-24070483,24071890-24072345 29 1.1
05_05_0022 + 21592403-21593083,21593720-21594208 29 1.1
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 29 1.5
09_02_0226 - 6007656-6008063,6012166-6012678 29 1.9
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 29 1.9
11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075 28 3.4
11_06_0364 - 22727978-22729149,22730475-22730727,22731628-227319... 28 3.4
11_04_0142 + 14027726-14029081 28 3.4
03_04_0187 - 18236041-18236643 28 3.4
03_04_0134 - 17593449-17594702 27 4.5
12_01_0335 - 2583476-2583493,2583919-2583965,2584151-2584274,258... 27 5.9
09_03_0218 + 13539481-13540082,13540171-13540276,13540645-135409... 27 5.9
03_04_0188 - 18241815-18242477 27 5.9
01_06_1614 - 38648495-38649706 27 5.9
01_06_1284 + 35994595-35995074 27 5.9
12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,731... 27 7.8
10_08_0392 + 17500748-17500877,17501006-17501280,17501321-175013... 27 7.8
09_04_0564 + 18565583-18566449,18569662-18570123 27 7.8
08_02_1172 + 24898290-24899141,24900864-24901328 27 7.8
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 27 7.8
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 27 7.8
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 48.0 bits (109), Expect = 3e-06
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +3
Query: 54 CDVCPYQGRTMDLLKVHKRSH---LVDKPFKC--TQCPKATTTASNLSKHMRHVHSTARP 218
CDVC + + K H+R H V + +C C + + SNL KH++ VH RP
Sbjct: 415 CDVCGTKQLKKNF-KRHQRMHEGSCVTERVRCHLKDCKLSFSKKSNLDKHVKAVHEQKRP 473
Query: 219 HKCNY--CEKAFSYQHDMKRHVK 281
C + C K+FSY+H H K
Sbjct: 474 FVCGFSGCGKSFSYKHVRDNHEK 496
Score = 31.9 bits (69), Expect = 0.21
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 126 KPFKCTQ--CPKATTTASNLSKHMR-HVHSTARPHKCNY--CEKAFSYQHDMKRHVKDIH 290
K F C + C K AS L KH HV C C KAF+ +K H K H
Sbjct: 351 KEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHNKSCH 410
Query: 291 LRQGTVECDVCYKKFNTKKILQGHRWKIHK 380
V CDVC K KK + H+ ++H+
Sbjct: 411 RH---VVCDVCGTK-QLKKNFKRHQ-RMHE 435
Score = 27.5 bits (58), Expect = 4.5
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 213 RPHKCNY--CEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRWKIHK 380
RP C+ C ++S + + RH+ + + C +KF K +Q H ++HK
Sbjct: 285 RPFSCHVDGCPFSYSRKDHLNRHLLTHQGKLFACPMEGCNRKFTIKGNIQRHVQEMHK 342
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 46.4 bits (105), Expect = 9e-06
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Frame = +3
Query: 51 KCDVCPYQGRTMDL-----LKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMRHVHST 209
K D+CP +G L H++ H+ ++P KCT C KA ++HMR VH+
Sbjct: 1251 KRDICPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMR-VHTG 1309
Query: 210 ARPHKCNY--CEKAFSYQHDMKRH 275
RP++C C + F + D RH
Sbjct: 1310 VRPYECQEPGCGQTFRFVSDFSRH 1333
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 234 CEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRWKIH 377
C+ +FS Q D+ H +DI +G C KKF K L HR K+H
Sbjct: 1237 CDMSFSTQQDLLLHKRDICPVKG------CKKKFFCHKYLLQHR-KVH 1277
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 44.8 bits (101), Expect = 3e-05
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 16/133 (12%)
Frame = +3
Query: 30 HENVFPFKCDV--CPYQGRTMDLLKVHKRSHLVDKPFKCTQ--CPKATTTASNLSKHMRH 197
H + F C + CP+ D L H H K F C+ C + + +N+ +H++
Sbjct: 82 HSDERSFICPLEDCPFSYIRKDHLNRHMLKHQ-GKLFTCSMDGCGRKFSIKANMQRHVKE 140
Query: 198 VHSTARPHKCNY--------CEKAFSYQHDMKRHVKDIHLRQGTVE---CDV-CYKKFNT 341
+H K N C K F Y MK+H ++ H++ VE C+ C K F
Sbjct: 141 IHEDETATKSNRQFVCKEEGCNKVFKYASKMKKH-EESHVKLDYVEVVCCEPGCMKTFTN 199
Query: 342 KKILQGHRWKIHK 380
+ L+ H H+
Sbjct: 200 VECLRAHNQACHQ 212
Score = 44.8 bits (101), Expect = 3e-05
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Frame = +3
Query: 51 KCDVCPYQGRTMDLLKVHKRSHLV---DKPFKCT--QCPKATTTASNLSKHMRHVHSTAR 215
+CD+C + ++ K H R+H + KC+ C + + SNL+KH++ H +
Sbjct: 215 QCDICGEKHLKKNI-KRHLRAHEEVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVK 273
Query: 216 PHKCNY--CEKAFSYQHDMKRHVK 281
P C + CEK F Y+H H K
Sbjct: 274 PFACRFTGCEKVFPYKHVRDNHEK 297
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 54 CDVCPYQGRTMDLLKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMRHVHSTARPHKC 227
C C + LK H +SH ++ F C CP + +L++HM
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCSM 121
Query: 228 NYCEKAFSYQHDMKRHVKDIH 290
+ C + FS + +M+RHVK+IH
Sbjct: 122 DGCGRKFSIKANMQRHVKEIH 142
Score = 37.9 bits (84), Expect = 0.003
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 138 CTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSY--QHDMKRHVKDIHLRQGTVE 311
C +C + ++L +HM+ HS R C + FSY + + RH+ + T
Sbjct: 62 CQECGASFQKPAHLKQHMQS-HSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLFTCS 120
Query: 312 CDVCYKKFNTKKILQGHRWKIHK 380
D C +KF+ K +Q H +IH+
Sbjct: 121 MDGCGRKFSIKANMQRHVKEIHE 143
>03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 43.2 bits (97), Expect = 8e-05
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 93 LKVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMRHVHSTARPHKCNY--CEKAFSYQH 260
LK H+ H ++PFKC CP ++H+R VH+ RP+KC+ C ++F Y
Sbjct: 834 LKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIR-VHTGERPYKCSAPDCGQSFRYVS 892
Query: 261 DMKRHVK 281
D RH K
Sbjct: 893 DYSRHRK 899
Score = 35.5 bits (78), Expect = 0.017
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 27 IHENVFPFKC--DVCPYQGRTMDLLKVHKRSHLVDKPFKCT--QCPKATTTASNLSKHMR 194
+H + PFKC D CP + + H R H ++P+KC+ C ++ S+ S+H +
Sbjct: 840 VHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSFRYVSDYSRHRK 899
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 39.9 bits (89), Expect = 8e-04
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVEC 314
+ KH R HS R C+ C KA++ D K H+K R T +C
Sbjct: 129 IKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKTCGTRGHTCDC 174
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 75 GRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSY 254
G + + K +R H + + C++C KA S+ H++ + R H C+ C + FS
Sbjct: 124 GDLVGIKKHFRRKHSGHRQWACSRCSKAYAVHSDYKAHLKTCGT--RGHTCD-CGRVFSR 180
Query: 255 QHDMKRH 275
H
Sbjct: 181 VESFIEH 187
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 39.1 bits (87), Expect = 0.001
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +3
Query: 63 CPYQGRTMDLLKVHKRSHLVDKPFKC--TQCPKATTTASNLSKHMRHVHSTARPHKCNY- 233
C R+ L+ H+ H D P+KC C A + + +H + VH+ RP+KC
Sbjct: 570 CGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQ-VHAGKRPYKCTTP 628
Query: 234 -CEKAFSYQHDMKRH 275
C K + + D RH
Sbjct: 629 GCSKIYKFVSDFTRH 643
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 37.9 bits (84), Expect = 0.003
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Frame = +3
Query: 60 VCPYQ--GRT-MDLLKVHKRSHLV-DKPFKCTQ--CPKATTTASNLSKHMRHVHSTARPH 221
+C Y+ G+T +D+ + K +H+ ++ + C + C K +S L +H +H+ +
Sbjct: 88 LCSYENCGKTFVDVAALRKHAHVHNERQYICQEPGCGKKFVDSSKLKRH-HLIHTGQKDF 146
Query: 222 KCNY--CEKAFSYQHDMKRHVKDIHLRQGTVEC--DVCYKKFNTKKILQGH 362
C + C KAFS +++ H+K H + C C K+F + L+ H
Sbjct: 147 ICPHPGCGKAFSLDFNLRSHLK-THALENYHVCPFPACGKRFTSDSKLKSH 196
Score = 29.5 bits (63), Expect = 1.1
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNY--CEKAFSYQHDMKRHVKDIHLRQGTVE 311
K TT AS RP+ C Y C KA+ + + + H+K H G E
Sbjct: 239 KTTTPASTKPTTPAPTSFAERPYVCPYDGCGKAYIHSYKLNLHLKTQHPEHGQEE 293
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVEC 314
+ KH R HS R C C KA++ D K H+K R + +C
Sbjct: 130 IKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGTRGHSCDC 175
Score = 30.7 bits (66), Expect = 0.48
Identities = 18/76 (23%), Positives = 32/76 (42%)
Frame = +3
Query: 75 GRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSY 254
G + + K +R H + + C +C KA S+ H++ + R H C+ C + FS
Sbjct: 125 GDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLKTCGT--RGHSCD-CGRVFSR 181
Query: 255 QHDMKRHVKDIHLRQG 302
H + +G
Sbjct: 182 VESFIEHQDTCNASRG 197
>09_04_0155 -
15185985-15186755,15187049-15187236,15187479-15187517,
15187741-15187768
Length = 341
Score = 37.1 bits (82), Expect = 0.006
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 222 KCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRW-KIHKIKGER 395
KC + E+ +Y K+H+K +L+ + C++C + N++K+L HR+ K H+ K E+
Sbjct: 277 KCTF-ERMLAYHLTGKKHLKQENLQ---LSCEICKLQCNSEKVLSDHRYGKKHQAKLEK 331
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 37.1 bits (82), Expect = 0.006
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 66 PYQGRTMDLLKVHKRSHLVDKPFKCTQCP-KATTTASNLSKHMRHVHSTARPHKCNYCEK 242
P++ R +V KR ++ +P P +A + + KH H + KC+ C K
Sbjct: 73 PWKLRQRSGKEVRKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKK-WKCDKCSK 131
Query: 243 AFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
++ Q D K H K R+ +C + +
Sbjct: 132 KYAVQSDWKAHTKTCGSREYRCDCGTLFSR 161
>03_02_0298 - 7204808-7205477,7206421-7206510,7207945-7208447
Length = 420
Score = 36.7 bits (81), Expect = 0.007
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKI 350
+ KH R H R C C K ++ Q D K H+K R + +C + + T+ +
Sbjct: 117 IKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRKITRSL 174
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 75 GRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFS 251
G + + K +R H + + C +C K S+ H++ + R H C+ C + FS
Sbjct: 112 GDLVGIKKHFRRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGT--RGHSCD-CGRVFS 167
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 35.9 bits (79), Expect = 0.013
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 105 KRSHLVDKPFKCTQCP-KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
KR ++ +P P +A + + KH H R +C C K ++ D K HVK
Sbjct: 86 KRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKR-WRCERCGKRYAVHSDWKAHVK 144
Query: 282 DIHLRQGTVECDVCYKKFNTKKILQGHR 365
+ R+ +C + F+ K L HR
Sbjct: 145 NCGTREYRCDCGIL---FSRKDSLLTHR 169
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 35.5 bits (78), Expect = 0.017
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQ 356
L H R H ARP+ C C K F+ + D + H K+ G + VC F K+ L+
Sbjct: 266 LQTHYRRKHG-ARPYACRRCGKRFAVRGDWRTHEKNC----GKLWFCVCGSDFKHKRSLK 320
Query: 357 GH 362
H
Sbjct: 321 DH 322
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 33.9 bits (74), Expect = 0.052
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 225 CNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQGHRWKIHK 380
C YC++ F + + +H K H + C VC+KK +T + H ++HK
Sbjct: 13 CYYCDREFDDEKILVQHQKAKHFK-----CHVCHKKLSTAGGMAIHVLQVHK 59
Score = 30.3 bits (65), Expect = 0.64
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +3
Query: 63 CPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVH 203
C Y R D K+ + H K FKC C K +TA ++ H+ VH
Sbjct: 13 CYYCDREFDDEKILVQ-HQKAKHFKCHVCHKKLSTAGGMAIHVLQVH 58
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +3
Query: 105 KRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKD 284
K+ V+K F C C + L +H + H KC+ C K S M HV
Sbjct: 3 KKKKRVEKVF-CYYCDREFDDEKILVQHQKAKH-----FKCHVCHKKLSTAGGMAIHVLQ 56
Query: 285 IH 290
+H
Sbjct: 57 VH 58
>12_02_0916 - 24271151-24271894
Length = 247
Score = 26.2 bits (55), Expect(2) = 0.084
Identities = 20/73 (27%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Frame = +3
Query: 51 KCDVCPYQGRTMDLLKVHKRSH-------LVDKPFKCTQCPKATTTASNLSKHMRHVHST 209
+C VC + L HK SH +VD + A + S
Sbjct: 92 RCSVCGKAFASYQALGGHKASHRKPPPPAMVDDDEVVVETKPAAIATPSSSASGVSGGGG 151
Query: 210 ARPHKCNYCEKAF 248
R H+CN C KAF
Sbjct: 152 GRAHECNVCGKAF 164
Score = 25.8 bits (54), Expect(2) = 0.084
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 309 ECDVCYKKFNTKKILQGHR 365
EC+VC K F T + L GH+
Sbjct: 156 ECNVCGKAFPTGQALGGHK 174
>11_08_0067 - 28135216-28135728
Length = 170
Score = 33.1 bits (72), Expect = 0.090
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 276 VKDIHLRQGTVECDVCYKKFNTKKILQGHR 365
VK +HL G +C C ++F+T + L GHR
Sbjct: 35 VKRVHLDGGAFQCRTCGRRFSTFQALGGHR 64
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 33.1 bits (72), Expect = 0.090
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = +3
Query: 66 PYQGRTMDLLKVHKRSHLVDKPFKCTQCP-KATTTASNLSKHMRHVHSTARPHKCNYCEK 242
P++ + + + +R +L +P P +A + + KH H + +C+ C K
Sbjct: 73 PWKLKQKNPKEARRRVYLCPEPSCVHHDPSRALGDLTGIKKHYCRKHGEKK-WRCDKCSK 131
Query: 243 AFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
++ Q D K H K R+ +C + +
Sbjct: 132 RYAVQSDWKAHSKTCGTREYRCDCGTLFSR 161
>10_05_0043 +
8503979-8504407,8506484-8506624,8506865-8506975,
8507746-8508330
Length = 421
Score = 32.7 bits (71), Expect = 0.12
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 19/127 (14%)
Frame = +3
Query: 39 VFPFKCDVCPYQGRTMDLLKVHK--RSH----------LVDKPFKCTQCPKATTTASNLS 182
V P C+VC Q T ++L++HK + H + KP K P A+N++
Sbjct: 275 VQPLTCEVCKIQCDTPEVLRIHKTGKKHKKNLERLQDSITPKPVKPPSTPNTVALAANMA 334
Query: 183 KH--MRHVHSTARPHKCNYCEKAFSYQHD----MKRHVKDIHLRQGTVE-CDVCYKKFNT 341
V ++ P +K+ + + +R V D QG V+ C VC N+
Sbjct: 335 PDPVTTSVTTSVIPAAQTKKKKSAAATPEELEVKRRRVLDAGAAQGEVKICTVCNVVVNS 394
Query: 342 KKILQGH 362
+K+ + H
Sbjct: 395 QKVYEFH 401
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 KRSHLVDKPFKCTQCP-KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+R +L +P P +A + + KH H + KC+ C K ++ Q D K H K
Sbjct: 82 RRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKK-WKCDKCSKRYAVQSDWKAHSK 140
Query: 282 DIHLRQGTVECDVCYKK 332
R+ +C + +
Sbjct: 141 ICGTREYRCDCGTLFSR 157
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 KRSHLVDKPFKCTQCP-KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+R +L +P P +A + + KH H + KC+ C K ++ Q D K H K
Sbjct: 134 RRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKK-WKCDKCSKRYAVQSDWKAHSK 192
Query: 282 DIHLRQGTVECDVCYKK 332
R+ +C + +
Sbjct: 193 ICGTREYRCDCGTLFSR 209
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
+A + + KH H + KC+ C K ++ Q D K H K R+ +C + +
Sbjct: 80 RALGDLTGIKKHFCRKHGEKK-WKCDKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSR 138
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 32.3 bits (70), Expect = 0.16
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 7/87 (8%)
Frame = +3
Query: 93 LKVHKRSHLVDKPFKCTQ--CP-----KATTTASNLSKHMRHVHSTARPHKCNYCEKAFS 251
LK + K + C + CP +A + + KH H + KC+ C K ++
Sbjct: 94 LKQRSSTEAKKKVYVCPEITCPHHDATRALGDLTGIKKHYSRKHGEKK-WKCDRCSKKYA 152
Query: 252 YQHDMKRHVKDIHLRQGTVECDVCYKK 332
Q D K H K ++ +C + +
Sbjct: 153 VQSDWKAHTKICGTKEYRCDCGTIFSR 179
>03_06_0063 - 31391870-31392679
Length = 269
Score = 25.4 bits (53), Expect(2) = 0.18
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 12/79 (15%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASNL--SKHMRH--VHSTA- 212
FKC VC + L HK SH V P A + L S R STA
Sbjct: 97 FKCSVCGKSFSSYQALGGHKTSHRVKLPTPPAAPVLAPAPVAALLPSAEDREPATSSTAA 156
Query: 213 -------RPHKCNYCEKAF 248
R H+C+ C+K F
Sbjct: 157 SSDGMTNRVHRCSICQKEF 175
Score = 25.4 bits (53), Expect(2) = 0.18
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRWK 371
C +C K+F T + L GH+ K
Sbjct: 168 CSICQKEFPTGQALGGHKRK 187
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 31.5 bits (68), Expect = 0.28
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
+A + + KH H R C C K ++ Q D+K H K R+ +C + +
Sbjct: 116 RALGDLTGIKKHFCRKHGEKR-WTCQRCGKRYAVQADLKAHTKTCGTREYRCDCGTLFTR 174
>04_04_0733 + 27639581-27641257
Length = 558
Score = 31.5 bits (68), Expect = 0.28
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 297 QGTVECDVCYKKFNTKKILQGHRWKIHKIKG 389
+G EC C K F++ + L GHR K+KG
Sbjct: 267 RGMFECKACKKVFSSHQALGGHRASHKKVKG 297
>02_05_0201 + 26687369-26689228
Length = 619
Score = 31.1 bits (67), Expect = 0.36
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 297 QGTVECDVCYKKFNTKKILQGHRWKIHKIKG 389
+G EC C K F + + L GHR K+KG
Sbjct: 293 RGMFECKACKKVFTSHQALGGHRASHKKVKG 323
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 30.7 bits (66), Expect = 0.48
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQ 356
L H + H A+P +C C K F+ + D + H K+ R C C F K+ L
Sbjct: 277 LQTHYKRKHG-AKPFRCRRCAKPFAVKGDWRTHEKNCGKRW---FC-ACGSDFKHKRSLN 331
Query: 357 GH 362
H
Sbjct: 332 DH 333
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 30.7 bits (66), Expect = 0.48
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
+A + + KH H + KC+ C K ++ D K H K R+ +C + +
Sbjct: 130 RALGDLTGIKKHFSRKHGEKK-WKCDKCSKRYAVHSDWKAHSKVCGTREYRCDCGTLFSR 188
>07_03_1165 - 24459156-24460139
Length = 327
Score = 30.3 bits (65), Expect = 0.64
Identities = 10/35 (28%), Positives = 22/35 (62%)
Frame = +3
Query: 294 RQGTVECDVCYKKFNTKKILQGHRWKIHKIKGERQ 398
R+ + C +C K+F ++K + GH ++H + E++
Sbjct: 109 REASFPCHLCNKEFGSRKAVHGH-MRVHHAENEKE 142
>02_05_0473 +
29319824-29322511,29322659-29322820,29324133-29324249,
29324360-29324469,29324504-29324540,29324696-29324862,
29325002-29325089,29325163-29325270
Length = 1158
Score = 30.3 bits (65), Expect = 0.64
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Frame = +3
Query: 222 KCNYCEKAFSYQHDMKRHVKDIHLRQ-----GTVECDVCYKKFNTKKILQGHRWKIH 377
KC C + FS + H ++H ++ C VC F +++L+ H + H
Sbjct: 464 KCKICSQEFSDDQGLGLHWTEVHKKEVRWLFRGYSCAVCMDSFTNRRVLERHVQEKH 520
>02_05_0202 + 26708049-26709074
Length = 341
Score = 29.9 bits (64), Expect = 0.84
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLVDKPFKCTQCPKATTTASN----LSKH---MRHVHS 206
F+C C R+ L H+ SH+ C P A + L +H +
Sbjct: 198 FQCPACKKVFRSYQALGGHRASHVRGGRGGCCAPPVAPPPQPHPQPPLPEHDAGEEDMDG 257
Query: 207 TARPHKCNYCEKAFSYQHDMKRHVK 281
A PH+C YC + F+ + H K
Sbjct: 258 KAPPHECPYCYRVFASGQALGGHKK 282
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 29.9 bits (64), Expect = 0.84
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
+A + + KH H + KC+ C K ++ D K H K R+ +C + +
Sbjct: 62 RALGDLTGIKKHFFRKHGEKK-WKCDKCSKKYAVHSDWKAHSKICGTREYKCDCGTIFSR 120
>06_03_0743 + 24069752-24070483,24071890-24072345
Length = 395
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+KR H + KPF C +C KA + H ++ K YC ++H KR +K
Sbjct: 303 YKRKHGI-KPFMCRKCGKAFAVRGDWRTHEKNC------GKLWYCACGSDFKH--KRSLK 353
Query: 282 DIHLR 296
D H+R
Sbjct: 354 D-HIR 357
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRW 368
C VCYK FN +Q H W
Sbjct: 230 CPVCYKTFNRYNNMQMHMW 248
>05_05_0022 + 21592403-21593083,21593720-21594208
Length = 389
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQ 356
L H + H A+P C C K F+ + D + H K+ R C C F K+ L
Sbjct: 285 LQTHYKRKHG-AKPFACRRCAKPFAVKGDWRTHEKNCGKRW---FC-ACGSDFKHKRSLN 339
Query: 357 GH 362
H
Sbjct: 340 DH 341
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/60 (23%), Positives = 25/60 (41%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
+A + + KH H + KC+ C K ++ D K H K R+ +C + +
Sbjct: 143 RALGDLTGIKKHFCRKHGEKK-WKCDRCGKRYAVHSDWKAHSKVCGTREYKCDCGTVFSR 201
>09_02_0226 - 6007656-6008063,6012166-6012678
Length = 306
Score = 28.7 bits (61), Expect = 1.9
Identities = 16/60 (26%), Positives = 26/60 (43%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+KR H KPF C +C K + H + + R C C F ++ +K H++
Sbjct: 230 YKRKHCA-KPFACRKCGKPLAVRGDWRTHEK---NCGRRWHC-ACGSDFKHKRSLKDHIR 284
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +3
Query: 177 LSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKKFNTKKILQ 356
L H + H A+P C C K + + D + H K+ R C C F K+ L+
Sbjct: 226 LQTHYKRKHC-AKPFACRKCGKPLAVRGDWRTHEKNCGRRW---HC-ACGSDFKHKRSLK 280
Query: 357 GH 362
H
Sbjct: 281 DH 282
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 28.7 bits (61), Expect = 1.9
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +3
Query: 153 KATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVKDIHLRQGTVECDVCYKK 332
K T + + + VH A PH K ++ K G++ C C K
Sbjct: 123 KIATPSGQKTGDKKGVH-VATPHPAKQASKTPVNDKSKEKSPKS---GGGSISCKSCSKT 178
Query: 333 FNTKKILQGHRWKIHKIK 386
FN++ LQ H H K
Sbjct: 179 FNSEMALQSHSKAKHPAK 196
>11_06_0367 - 22747760-22748931,22750324-22750550,22751035-22751075
Length = 479
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Frame = +3
Query: 123 DKPFKCTQCPKATTTASNLSKHMRHVHSTARPH--------KCNYCEKAFSYQHDMKRHV 278
+KP CT C + + S S MR + T +C+YC F D RH
Sbjct: 416 EKP--CTSCFEGSKPRSLSSGSMRPHYCTCHRKLMRSKDRVECSYCHNFFQNLADYYRHK 473
Query: 279 KDIH 290
K+IH
Sbjct: 474 KNIH 477
>11_06_0364 - 22727978-22729149,22730475-22730727,22731628-22731963,
22732306-22732512,22734988-22735686,22736441-22736590,
22740204-22740962,22741023-22741235
Length = 1262
Score = 27.9 bits (59), Expect = 3.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 8/64 (12%)
Frame = +3
Query: 123 DKPFKCTQCPKATTTASNLSKHMRHVHSTARPH--------KCNYCEKAFSYQHDMKRHV 278
+KP CT C + + S S MR + T +C+YC F D RH
Sbjct: 1199 EKP--CTSCFEGSKPRSLSSGSMRPHYCTCHRKLMRSKDRVECSYCHNFFQNLADYYRHK 1256
Query: 279 KDIH 290
K+IH
Sbjct: 1257 KNIH 1260
>11_04_0142 + 14027726-14029081
Length = 451
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRWKIHK 380
C +C K+F+T+K + GH ++H+
Sbjct: 119 CRICRKEFDTRKAVDGH-MRVHR 140
>03_04_0187 - 18236041-18236643
Length = 200
Score = 27.9 bits (59), Expect = 3.4
Identities = 21/89 (23%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSH----LVDKPFKCTQCPKATTTASNLSKHMRHVHSTAR 215
F+C VC + L HK SH P P + S S
Sbjct: 48 FRCSVCGKAFPSHQALGGHKASHRKPPTAALPMHVIDAPPPPSAEDTASSSTTTTTSGGG 107
Query: 216 PHKCNYCEKAFSYQHDMKRHVKDIHLRQG 302
H+C+ C + F+ + H K H G
Sbjct: 108 RHRCSVCHRTFATGQALGGH-KRCHYWDG 135
>03_04_0134 - 17593449-17594702
Length = 417
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRWKIHKIKGE 392
C +C K+F + + L GH+ + H I GE
Sbjct: 357 CPICSKEFGSGQALGGHK-RSHSIAGE 382
>12_01_0335 -
2583476-2583493,2583919-2583965,2584151-2584274,
2584421-2584665,2585281-2585404,2585424-2585456
Length = 196
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPH 221
H H KC C A TA+ KH + HS H
Sbjct: 138 HMSRHHSKATVKCKDCLLAFDTAAAAGKHHHYAHSLPSVH 177
>09_03_0218 +
13539481-13540082,13540171-13540276,13540645-13540960,
13541187-13541263,13541269-13541895,13542783-13543112,
13543442-13543747,13543824-13543896,13544004-13544089,
13544219-13544396,13545311-13545756
Length = 1048
Score = 27.1 bits (57), Expect = 5.9
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 FKCTQCPKATTTASNLSKHMRHVHSTARPHKCN-YCEKAFSYQHDMKRHVKDIH 290
F+ PK SK RH++ +A CN ++ F + KR +K+ H
Sbjct: 759 FRREDVPKLKLYLDKHSKEFRHIYCSAVQKVCNPVHDETFYLTEEHKRKLKEEH 812
>03_04_0188 - 18241815-18242477
Length = 220
Score = 27.1 bits (57), Expect = 5.9
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Frame = +3
Query: 48 FKCDVCPYQGRTMDLLKVHKRSHLV-----DKPFKCTQCPKATTTASNLSKHMRHVHSTA 212
F+C VC + L HK SH D + + + +
Sbjct: 73 FRCTVCGKAFASYQALGGHKSSHRKPPSPGDHYGAAAAAQQLASAGDSKEDSASSAAGST 132
Query: 213 RPHKCNYCEKAFSYQHDMKRHVKDIHLRQGT 305
PH+C C ++F+ + H K H GT
Sbjct: 133 GPHRCTICRRSFATGQALGGH-KRCHYWDGT 162
>01_06_1614 - 38648495-38649706
Length = 403
Score = 27.1 bits (57), Expect = 5.9
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRWKIHKIKGERQ 398
C VC K+F ++K + GH ++H+ +++
Sbjct: 107 CHVCSKEFGSRKAVHGH-MRVHQADKDKE 134
>01_06_1284 + 35994595-35995074
Length = 159
Score = 27.1 bits (57), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 297 QGTVECDVCYKKFNTKKILQGHR 365
+G EC C K+F + + L GHR
Sbjct: 32 EGVFECKTCSKRFPSFQALGGHR 54
>12_01_0798 + 7314885-7314953,7315324-7315387,7315489-7315677,
7316430-7316625,7316727-7316953,7317177-7318134,
7320104-7321307,7321517-7321876,7321965-7323195,
7323334-7323599,7323738-7326335
Length = 2453
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 148 HWVHLNGLSTKWDLL*TFSKSIVRP 74
HW+ ++G S DL+ + +KS++ P
Sbjct: 1392 HWLAVSGFSPNDDLVMSLAKSVIEP 1416
>10_08_0392 +
17500748-17500877,17501006-17501280,17501321-17501388,
17501516-17501632,17501802-17501943,17502622-17502912,
17503507-17503650
Length = 388
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 223 LCGLAVLWTCRMCFERLLAVVVAFGHWVHLNGLSTKWDLL*TF 95
+C ++ T FE L V++ FG+ + T W L+ TF
Sbjct: 30 ICNKYLISTLGFFFEMFLNVILCFGNVENAATTLTSWHLMVTF 72
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRW 368
C VC+K FN +Q H W
Sbjct: 275 CPVCFKTFNRYNNMQMHMW 293
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+KR H + KPF C +C KA + H + + + C C F ++ +K H +
Sbjct: 348 YKRKHGL-KPFLCRKCGKAFAVKGDWRTHEK---NCGKLWYC-LCGSEFKHKRSLKDHAR 402
>08_02_1172 + 24898290-24899141,24900864-24901328
Length = 438
Score = 26.6 bits (56), Expect = 7.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 312 CDVCYKKFNTKKILQGHRW 368
C VC+K FN +Q H W
Sbjct: 270 CPVCFKTFNRYNNMQMHMW 288
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 102 HKRSHLVDKPFKCTQCPKATTTASNLSKHMRHVHSTARPHKCNYCEKAFSYQHDMKRHVK 281
+KR H + KPF C +C KA + H + + + C C F ++ +K H +
Sbjct: 343 YKRKHGL-KPFLCRKCGKAFAVKGDWRTHEK---NCGKLWYC-LCGSEFKHKRSLKDHAR 397
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +1
Query: 115 IWWINRSNVPNVQRRRLQQVIFRS------TCGTSIAL-QGRISAITARKRSLT 255
++WIN+ N+ V+ L++ + S CGT + L G + ++ R+ S+T
Sbjct: 255 LFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSERRTSVT 308
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 204 STARPHKCNY--CEKAFSYQHDMKRHVKDIH 290
S RP+ C Y C KA+ +++ + H+K H
Sbjct: 197 SADRPYVCPYDGCAKAYIHEYKLNLHLKKEH 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,185,227
Number of Sequences: 37544
Number of extensions: 259464
Number of successful extensions: 841
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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