Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D12
(625 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 40 3e-05
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 40 3e-05
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 38 8e-05
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 36 3e-04
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 29 0.049
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 5.6
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.6
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 5.6
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 7.4
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 21 9.8
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 21 9.8
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 39.5 bits (88), Expect = 3e-05
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 342 VEPMQSVETARGTRARLECKASARPPPRITW-YKDGRPVADIALRRFRVQNYRRRSVLVI 518
+EP VE + + A L+C A+ PP I W DG PV D+ R ++N +
Sbjct: 34 MEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFP 93
Query: 519 RHARNED--SATYECRAQGAVG 578
A +D SA Y C A +VG
Sbjct: 94 AAAFRQDVHSAAYRCVASNSVG 115
Score = 36.7 bits (81), Expect = 2e-04
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 327 SSPARVE---PMQSVETARGTRARLECKASARP---PPRITWYKDGRPVADIALRRFRVQ 488
++P VE P+ SV G A C+ S P P ITWYKDGR +
Sbjct: 328 TAPLHVEVTPPLLSVHL--GGNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTG------- 378
Query: 489 NYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANI 605
R+ +L + ED Y+C + + G A A A +
Sbjct: 379 --RQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAEL 415
Score = 36.3 bits (80), Expect = 2e-04
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 300 IRAVYKPGYSSPARVEPMQSVETARGTRARLECKASARPPPRITWYKD--GRPVADIALR 473
+R G P +E V A+ L C A A P P WY P+ ++
Sbjct: 227 VRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLSGP 286
Query: 474 RFRVQNYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVSP 620
R R+ SVL + ED+ Y C A G A A+ + V +P
Sbjct: 287 RTRLLG----SVLALEAVTLEDNGIYRCSASNP-GGEASAEIRLIVTAP 330
Score = 34.7 bits (76), Expect = 7e-04
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 375 GTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRR-----RSVLVIRHARNED 539
G L+C A+ P P++TW DG + RF + Y S + I H ED
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNG--RFMIGQYVTVHGDVISHVNISHVMVED 493
Query: 540 SATYECRAQGAVG 578
Y C A+ G
Sbjct: 494 GGEYSCMAENRAG 506
Score = 34.7 bits (76), Expect = 7e-04
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +3
Query: 342 VEPMQSVETARGTRARLECKASARPPPRITWYK-DGRPVADI-ALRRFRVQNYRRRSVLV 515
VEP V R L C+A P P I W K G + LR L+
Sbjct: 714 VEPTD-VSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLL 772
Query: 516 IRHARNEDSATYECRAQGAVG 578
++H + + Y C+A +G
Sbjct: 773 LQHVKEDREGFYLCQASNGIG 793
Score = 33.9 bits (74), Expect = 0.001
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +3
Query: 327 SSPARVEPMQSVETARGTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRR-- 500
SSP P + V +G A L C+ P +TW K G+ + + +RV R
Sbjct: 806 SSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPS-TNYRVTVKREVT 864
Query: 501 ----RSVLVIRHARNEDSATYECRAQGAVG 578
+ L I A DS Y C+A G
Sbjct: 865 PDGVIAQLQISSAEASDSGAYFCQASNLYG 894
Score = 31.1 bits (67), Expect = 0.009
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 360 VETARGTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRRRSVLVIRHARNE- 536
V G RL+C + P I W + R + D LR Q LVI + +
Sbjct: 528 VTAVAGETLRLKCPVAGYPIEEIKWERANRELPD-DLR----QKVLPDGTLVITSVQKKG 582
Query: 537 DSATYECRAQGAVGPPAIAKANITVVSP 620
D+ Y C A+ G A ++ V+ P
Sbjct: 583 DAGVYTCSARNKQGHSARRSGDVAVIVP 610
Score = 29.5 bits (63), Expect = 0.028
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +3
Query: 333 PARVEPMQSVE-TARGTRARLECKASARPPP-RITWYKDGR 449
P +EP E + G R R C +A PP I+W KDG+
Sbjct: 610 PPIIEPFTFQEGLSEGMRTRTVCGVAAGDPPLTISWLKDGQ 650
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 39.5 bits (88), Expect = 3e-05
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 342 VEPMQSVETARGTRARLECKASARPPPRITW-YKDGRPVADIALRRFRVQNYRRRSVLVI 518
+EP VE + + A L+C A+ PP I W DG PV D+ R ++N +
Sbjct: 34 MEPPSRVEFSNSSGAWLDCTATGSPPLNIDWSTADGHPVNDVPGVRRVLRNGTLVLLPFP 93
Query: 519 RHARNED--SATYECRAQGAVG 578
A +D SA Y C A +VG
Sbjct: 94 AAAFRQDVHSAAYRCVASNSVG 115
Score = 36.7 bits (81), Expect = 2e-04
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 327 SSPARVE---PMQSVETARGTRARLECKASARP---PPRITWYKDGRPVADIALRRFRVQ 488
++P VE P+ SV G A C+ S P P ITWYKDGR +
Sbjct: 328 TAPLHVEVTPPLLSVHL--GGNAEFRCEVSTHPQAGPHFITWYKDGRQLPGTG------- 378
Query: 489 NYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANI 605
R+ +L + ED Y+C + + G A A A +
Sbjct: 379 --RQSELLRLNGINREDRGMYQCIVRRSEGDTAQASAEL 415
Score = 36.3 bits (80), Expect = 2e-04
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Frame = +3
Query: 300 IRAVYKPGYSSPARVEPMQSVETARGTRARLECKASARPPPRITWYKD--GRPVADIALR 473
+R G P +E V A+ L C A A P P WY P+ ++
Sbjct: 227 VRIADHRGVMPPVILENSGVVHVAQDESTSLVCVAQACPTPEYRWYAQTGSEPMLVLSGP 286
Query: 474 RFRVQNYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVSP 620
R R+ SVL + ED+ Y C A G A A+ + V +P
Sbjct: 287 RTRLLG----SVLALEAVTLEDNGIYRCSASNP-GGEASAEIRLIVTAP 330
Score = 34.7 bits (76), Expect = 7e-04
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Frame = +3
Query: 375 GTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRR-----RSVLVIRHARNED 539
G L+C A+ P P++TW DG + RF + Y S + I H ED
Sbjct: 436 GPAVSLKCSAAGNPTPQVTWALDGFALPTNG--RFMIGQYVTVHGDVISHVNISHVMVED 493
Query: 540 SATYECRAQGAVG 578
Y C A+ G
Sbjct: 494 GGEYSCMAENRAG 506
Score = 34.7 bits (76), Expect = 7e-04
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Frame = +3
Query: 342 VEPMQSVETARGTRARLECKASARPPPRITWYK-DGRPVADI-ALRRFRVQNYRRRSVLV 515
VEP V R L C+A P P I W K G + LR L+
Sbjct: 710 VEPTD-VSVERNKHVALHCQAQGVPTPTIVWKKATGSKSGEYEELRERAYTKILSNGTLL 768
Query: 516 IRHARNEDSATYECRAQGAVG 578
++H + + Y C+A +G
Sbjct: 769 LQHVKEDREGFYLCQASNGIG 789
Score = 33.9 bits (74), Expect = 0.001
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 3/99 (3%)
Frame = +3
Query: 333 PARVEPMQSVETAR-GTRARLECKASARPPP-RITWYKDGRPVADIALRRFRVQNYRR-R 503
P ++ P + G R L C + P I+W KDGR + R V N +
Sbjct: 610 PPKISPFTADRDLHLGERTTLTCSVTRGDLPLSISWLKDGRAMGPS--ERVHVTNMDQYN 667
Query: 504 SVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVSP 620
S+L+I H + + Y C A+ + + + V P
Sbjct: 668 SILMIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPP 706
Score = 33.9 bits (74), Expect = 0.001
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +3
Query: 327 SSPARVEPMQSVETARGTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRR-- 500
SSP P + V +G A L C+ P +TW K G+ + + +RV R
Sbjct: 802 SSPYFAAPSRLVTVKKGDTATLHCEVHGDTPVTVTWLKGGKIELNPS-TNYRVTVKREVT 860
Query: 501 ----RSVLVIRHARNEDSATYECRAQGAVG 578
+ L I A DS Y C+A G
Sbjct: 861 PDGVIAQLQISSAEASDSGAYFCQASNLYG 890
Score = 31.1 bits (67), Expect = 0.009
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 360 VETARGTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRRRSVLVIRHARNE- 536
V G RL+C + P I W + R + D LR Q LVI + +
Sbjct: 528 VTAVAGETLRLKCPVAGYPIEEIKWERANRELPD-DLR----QKVLPDGTLVITSVQKKG 582
Query: 537 DSATYECRAQGAVGPPAIAKANITVVSP 620
D+ Y C A+ G A ++ V+ P
Sbjct: 583 DAGVYTCSARNKQGHSARRSGDVAVIVP 610
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 37.9 bits (84), Expect = 8e-05
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +3
Query: 369 ARGTRARLECKASARPPPRITWYK-DGRPVADIA-LRRFRVQNYRRRSVLVIRHARNEDS 542
A+G+ AR+ECKA P P++TW K G D L+ L I + + +
Sbjct: 691 AQGSDARVECKADGFPKPQVTWKKAAGDTPGDYTDLKLSNPDISVEDGTLSINNIQKTNE 750
Query: 543 ATYECRAQGAVGPPAIAKANITVVSP 620
Y C A +G A I+V +P
Sbjct: 751 GYYLCEAVNGIGAGLSAVIFISVQAP 776
Score = 37.5 bits (83), Expect = 1e-04
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +3
Query: 390 LECKASARPPPRITWYKDGRPVADIALRRFRVQ-NYRRRSV---LVIRHARNEDSATYEC 557
L C A P P WYK + + RR VQ N R R V L+IR AR EDS Y C
Sbjct: 232 LLCPAQGFPVPVHRWYK----FIEGSSRRQPVQLNERVRQVSGTLIIREARVEDSGKYLC 287
Query: 558 RAQGAVGPPAIAKANITVVSP 620
+VG ++ + +TV +P
Sbjct: 288 IVNNSVGGESV-ETVLTVTAP 307
Score = 37.5 bits (83), Expect = 1e-04
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +3
Query: 321 GYSSPARVEPMQSVETAR-GTRARLECKASARPPPRITWYKDGRPVAD---IALRRFRVQ 488
G P ++ + ET + G L+C AS P P ITW DG+ +++ + + ++
Sbjct: 389 GRFEPPQIRQAFAEETLQPGPSMFLKCVASGNPTPEITWELDGKRLSNTERLQVGQYVTV 448
Query: 489 NYRRRSVLVIRHARNEDSATYECRAQGAVG 578
N S L I D Y+C A VG
Sbjct: 449 NGDVVSHLNISSTHTNDGGLYKCIAASKVG 478
Score = 36.7 bits (81), Expect = 2e-04
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 345 EPMQSVETARGTRARLECKASARPPPRITWYK-DGRPVADI 464
EP V+ + GT A +EC+A P P I W + DG V D+
Sbjct: 8 EPPNRVDFSNGTGAVVECQARGNPQPDIIWVRADGSAVGDV 48
Score = 33.9 bits (74), Expect = 0.001
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +3
Query: 336 ARVEPM-QSVETARGTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQNYRRRS-- 506
A +EP Q+++ R A C P ++W KDG+P+ + R+++ ++
Sbjct: 310 AEIEPSTQTIDFGRP--ATFTCNVRGNPIKTVSWLKDGKPLG-LEEAVLRIESVKKEDKG 366
Query: 507 --VLVIRHARNEDSATYECRAQGAVGPPAIAKA 599
+R+ + AT E + G PP I +A
Sbjct: 367 MYQCFVRNDQESAQATAELKLGGRFEPPQIRQA 399
Score = 29.9 bits (64), Expect = 0.021
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Frame = +3
Query: 300 IRAVYKPGYSSPARVEPMQSVETAR-GTRARLECKASARPPPRITWYKDGRPVADIALRR 476
+ AV +P E +TAR G A L+C+A P I W + + + + R
Sbjct: 765 LSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMNNKRLDPKSDSR 824
Query: 477 FRVQNYRRR----SVLVIRHARNEDSATYECRAQGAVG 578
+ ++ S L I+ DSA + C A A G
Sbjct: 825 YTIREEILANGVLSDLSIKRTERSDSALFTCVATNAFG 862
Score = 26.2 bits (55), Expect = 0.26
Identities = 23/102 (22%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Frame = +3
Query: 318 PGYSSPARVEPMQSVETARGTR-ARLECKASARPPPRITWYKDGRPVADIALRRFRVQNY 494
P PA++ TA +L C A P P +TW G + R++
Sbjct: 1271 PSVRVPAKIASFDDKFTATYKEDVKLPCLAVGVPAPEVTWKVRGA----VLQSSDRLRQL 1326
Query: 495 RRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVSP 620
S L I+ D+ Y C + G + I P
Sbjct: 1327 PEGS-LFIKEVDRTDAGEYSCYVENTFGHDTVTHQLIVHAPP 1367
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 35.9 bits (79), Expect = 3e-04
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +3
Query: 375 GTRARLECKASARPPPRITWYKDGRPVAD---IALRRFRVQNYRRRSVLVIRHARNEDSA 545
G + C A+ P P ITW KDG + + + V N +S + I A +D+
Sbjct: 37 GRKITFFCMATGFPRPEITWLKDGIELYHHKFFQVHEWPVGNDTLKSKMEIDPATQKDAG 96
Query: 546 TYECRA 563
YEC+A
Sbjct: 97 YYECQA 102
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 28.7 bits (61), Expect = 0.049
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +3
Query: 384 ARLECKASARPPPRITWYKDGRPVADIALRRFRVQNY---RRRSVLVIRHARNEDSATYE 554
A + C + P PR+ W K+ D AL + Y + L+I++ D+ Y
Sbjct: 419 ANIRCHVAGEPLPRVQWLKN-----DEALNHDQPDKYDLIGNGTKLIIKNVDYADTGAYM 473
Query: 555 CRAQGAVG 578
C+A G
Sbjct: 474 CQASSIGG 481
Score = 27.9 bits (59), Expect = 0.085
Identities = 10/39 (25%), Positives = 18/39 (46%)
Frame = +3
Query: 375 GTRARLECKASARPPPRITWYKDGRPVADIALRRFRVQN 491
G ++C + PPP + W ++G + + RV N
Sbjct: 325 GDNVEIKCDVTGTPPPPLVWRRNGADLETLNEPEIRVFN 363
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 64 SDCTRASNAALVPNSCSPGIH 2
S CTR S VP+S +H
Sbjct: 14 SSCTRPSRGNAVPSSQRGNVH 34
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/31 (25%), Positives = 16/31 (51%)
Frame = -3
Query: 293 KQLPGPLERRTEGDGRMAPPLREHDIVPSIF 201
++ P P + + ++PPL +D P+ F
Sbjct: 181 RRTPDPHDETAKKPRVLSPPLNNNDATPTDF 211
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 64 SDCTRASNAALVPNSCSPGIH 2
S CTR S VP+S +H
Sbjct: 14 SSCTRPSRGNAVPSSQRGNVH 34
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 173 IEPIVGQLQPDDRVLTRPPALSPQDFLD 90
++P+ G L DR++ R +L + LD
Sbjct: 92 VDPVYGTLADFDRLVRRAKSLGLKVILD 119
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.8
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +3
Query: 489 NYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVS 617
NYR + V+ + A + A PA+ + NI V S
Sbjct: 27 NYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVRS 69
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 21.0 bits (42), Expect = 9.8
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +3
Query: 489 NYRRRSVLVIRHARNEDSATYECRAQGAVGPPAIAKANITVVSPA 623
NYR + V+ + A + A PAI + N+ V S A
Sbjct: 27 NYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIA 71
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,908
Number of Sequences: 438
Number of extensions: 3791
Number of successful extensions: 36
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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