Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D06
         (318 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O01888 Cluster: Serpentine receptor, class w protein 7;...    33   1.6  
UniRef50_UPI0000D5745A Cluster: PREDICTED: similar to CG13927-PA...    31   3.8  
UniRef50_Q05854 Cluster: Uncharacterized transcriptional regulat...    31   3.8  
UniRef50_Q58EH6 Cluster: Zgc:113651; n=2; Danio rerio|Rep: Zgc:1...    31   5.0  
UniRef50_O82612 Cluster: T5H22.5 protein; n=1; Arabidopsis thali...    31   5.0  
UniRef50_A2EFB6 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_Q4RVU4 Cluster: Chromosome 9 SCAF14991, whole genome sh...    31   6.6  

>UniRef50_O01888 Cluster: Serpentine receptor, class w protein 7;
           n=1; Caenorhabditis elegans|Rep: Serpentine receptor,
           class w protein 7 - Caenorhabditis elegans
          Length = 381

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -3

Query: 181 IQRPTLRHCVHCTRPTKSNMMYLLVNQLQNKLIKRAGVNENDRTAQSI--DTTTHTTNVN 8
           +   ++ HCV C         Y + +Q ++ L K  GV + D+T + +  +TTTH T VN
Sbjct: 321 VMASSIAHCVIC---------YCMSSQYRDTLKKMIGVGKEDKTVKIVIVETTTHPTTVN 371


>UniRef50_UPI0000D5745A Cluster: PREDICTED: similar to CG13927-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG13927-PA - Tribolium castaneum
          Length = 611

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 21/76 (27%), Positives = 37/76 (48%)
 Frame = -3

Query: 280 ISFCVVRGTVTFEDEDPRSIDNYFVR*LFDEHHIQRPTLRHCVHCTRPTKSNMMYLLVNQ 101
           ++  V+ G V FE ED  +  +Y V+   +E       + H VH    T S  MY+ +N+
Sbjct: 487 VTLTVLEGEVFFEIEDEETSQSYGVKLGKNESVPVEVEVFHKVHTISSTPSCYMYVYMNK 546

Query: 100 LQNKLIKRAGVNENDR 53
            +  L +    +++DR
Sbjct: 547 TREYLGELPQSSDSDR 562


>UniRef50_Q05854 Cluster: Uncharacterized transcriptional regulatory
           protein YLR278C; n=2; Saccharomyces cerevisiae|Rep:
           Uncharacterized transcriptional regulatory protein
           YLR278C - Saccharomyces cerevisiae (Baker's yeast)
          Length = 1341

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -3

Query: 145 TRPTKSNMMYLLVNQLQNKLIKRAGVNENDRTAQSIDTTTHTTNVN 8
           +RP  SNM+ L +    NK ++    N ++  A + DT+  T N+N
Sbjct: 213 SRPNSSNMVILPLPSPSNKPLENTNNNGSNVNAATNDTSASTNNIN 258


>UniRef50_Q58EH6 Cluster: Zgc:113651; n=2; Danio rerio|Rep:
           Zgc:113651 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 473

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
 Frame = -3

Query: 169 TLRHCVHCTRPTKSNMMYL---LVNQLQNKLIKRAGVNENDRTAQSIDTTTHTTNVNL 5
           TL H V C     S  +     L+N ++  ++  A  N N      +    HTTN+N+
Sbjct: 134 TLTHVVKCASEKLSQSLLSSSELINTIKENMVTTAKENVNHNLVHKLSDFDHTTNINV 191


>UniRef50_O82612 Cluster: T5H22.5 protein; n=1; Arabidopsis
           thaliana|Rep: T5H22.5 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 637

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 179 YMVFVKQSAHKIIVN*PWIFILKSNCSTYN 268
           ++VF K + + II+  PWIF +K+  STY+
Sbjct: 265 FVVFDKPATYNIILGTPWIFQMKAVPSTYH 294


>UniRef50_A2EFB6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 150

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 113 IGKPTTEQINKACRGERERPHSAINRHDYTHNQ 15
           + K     IN++ R +++R HS  NRH   +NQ
Sbjct: 36  LSKTVDRSINESLRPKKKRSHSVANRHTNVYNQ 68


>UniRef50_Q4RVU4 Cluster: Chromosome 9 SCAF14991, whole genome shotgun
            sequence; n=9; Clupeocephala|Rep: Chromosome 9 SCAF14991,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 1637

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 168  VGRCIWCSSNNQRTK*LSIDLGSSSSKVTVPRTTQKLITYKMSENAQDVI 317
            VG  +  +  N   K  +++ G+ S+  T P  TQK++T+ +SEN + V+
Sbjct: 1143 VGNALQVAVVNSEGK--ALEKGTWSTVTTRPGQTQKVVTFHVSENGETVL 1190


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,096,357
Number of Sequences: 1657284
Number of extensions: 5411409
Number of successful extensions: 14559
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14543
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)