Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_D02
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   0.40 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   1.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   1.6  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   3.8  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 0.40
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +3

Query: 75  DVSYLNYLCYFIFQLIMVQ*WLKFHLNFYYLHI*IRRFWYLKKKLFILTYSYRFSV 242
           D + L +LC+ + + +       F  NFY++   +   +YL K   + T  Y  S+
Sbjct: 270 DYNRLCHLCFLLDEKLSYIILTSFLNNFYFIIFQVFESFYLHKATTLETVYYFISL 325


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 75   DVSYLNYLCYFIFQLIMVQ*WLKFHLNFY 161
            DV Y+ ++CY   Q +  + +  + + FY
Sbjct: 1008 DVFYICHVCYATIQEVRAKIYFFYLVKFY 1036


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 1.6
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +3

Query: 75  DVSYLNYLCYFIFQLIMVQ*WLKFHLNFY 161
           DV Y+ ++CY   Q +  + +  + + FY
Sbjct: 289 DVFYICHVCYATIQEVRAKIYFFYLVKFY 317


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/28 (28%), Positives = 18/28 (64%)
 Frame = +3

Query: 33  GMAKAVYLYHINLHDVSYLNYLCYFIFQ 116
           G++  + + +  LH V+Y++ L +F F+
Sbjct: 201 GISFLLIISYSTLHFVNYIDDLFFFRFE 228


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,501
Number of Sequences: 336
Number of extensions: 1229
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)