Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_D01
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical p... 200 5e-52
AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical ... 73 1e-13
AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical... 45 4e-05
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 34 0.078
U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 27 9.0
>Z79754-13|CAB02101.1| 153|Caenorhabditis elegans Hypothetical
protein F25H2.5 protein.
Length = 153
Score = 200 bits (488), Expect = 5e-52
Identities = 90/135 (66%), Positives = 109/135 (80%)
Frame = +1
Query: 133 ERTFLMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 312
ERTF+ +KPDGV RGLVG II RFE++G+KLV LK + S+ L+ HY DL +PFFP L
Sbjct: 5 ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64
Query: 313 VKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNIIHGSDSVE 492
++YMSSGPVV MVW+GL+VVK GR MLGATNP S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65 IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124
Query: 493 SANKEIALWFTEKEV 537
SAN+EIA WF ++E+
Sbjct: 125 SANREIAHWFKQEEI 139
>AC006644-2|AAF39837.1| 118|Caenorhabditis elegans Hypothetical
protein F55A3.6 protein.
Length = 118
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = +1
Query: 292 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 471
+PFFP L+ YMSSGPVV M+WEG +VVK R +LG + +I DL ++
Sbjct: 33 KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEV-GEFRSIFYDLVVRDTHKGC 91
Query: 472 HGSDSVESANKEIALWFTE 528
H SDSV SAN+E LWF E
Sbjct: 92 HCSDSVASANREYVLWFEE 110
>AC025721-13|AAR85897.1| 139|Caenorhabditis elegans Hypothetical
protein Y48G8AL.15 protein.
Length = 139
Score = 44.8 bits (101), Expect = 4e-05
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Frame = +1
Query: 118 MADQRERTFLMV-KPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLAS 291
+ Q FL+V KP+ V R L + G ++ ++ + S L +Q Y+
Sbjct: 4 VGSQNALKFLVVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQG 63
Query: 292 RPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQMLGATNPADSQPGTIRGDLCIQVGRNII 471
+ F+ LV+++SSGPV+ M G G L QP IR + RN+
Sbjct: 64 KFFYDRLVRHISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVA 121
Query: 472 HGSDSVESANKEIALW 519
H SD ++A KE+ L+
Sbjct: 122 HASDE-DAAEKELQLF 136
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 33.9 bits (74), Expect = 0.078
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 339 CSHGLGGPECRQNWPSNARCYQSS*FSTRYHSRRLMYPS--WT 461
C GL G C Q +PSNA+C + R+ + R Y S WT
Sbjct: 336 CPEGLSGRYCEQVYPSNAQCARGKLTRERHINERECYQSAIWT 378
>U29382-6|AAF99998.1| 379|Caenorhabditis elegans Hypothetical
protein R03H10.1 protein.
Length = 379
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/32 (28%), Positives = 19/32 (59%)
Frame = +1
Query: 259 LLQQHYSDLASRPFFPGLVKYMSSGPVVPMVW 354
LL + + ++ S +PG V+++ P++P W
Sbjct: 144 LLDRCWKNVDSMELYPGTVQFLDKLPIIPSNW 175
>Z81129-6|CAB03412.1| 799|Caenorhabditis elegans Hypothetical
protein T23F1.7b protein.
Length = 799
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 277 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 435
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z81129-5|CAB03411.1| 779|Caenorhabditis elegans Hypothetical
protein T23F1.7a protein.
Length = 779
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +1
Query: 277 SDLASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTG--RQMLGATNPADSQPGTIR 435
SDL S + + + VV WEG+ +V+ G R + G N A+ P R
Sbjct: 66 SDLRSLRYPYAEFAFTDNNAVVMQSWEGVEIVEDGVSRLIFGRENGAEITPSADR 120
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 286 ASRPFFPGLVKYMSSGPVVPMVWEGLNVVKTGRQML---GATNPADSQPGTI 432
AS F Y+ V+ VW G +T Q + GATN D++ GTI
Sbjct: 1003 ASSEFLENSKAYIIDNGVILFVWVGSACPQTWVQDVFGVGATNQIDTESGTI 1054
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,709,240
Number of Sequences: 27780
Number of extensions: 262933
Number of successful extensions: 793
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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