Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C24
(458 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 170 1e-41
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 140 1e-32
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 138 4e-32
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 133 2e-30
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 124 1e-27
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 118 5e-26
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 111 5e-24
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 111 7e-24
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 111 9e-24
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 108 7e-23
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 99 4e-20
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 94 1e-18
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 82 5e-15
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 77 1e-13
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 77 2e-13
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 73 4e-12
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 73 4e-12
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 3e-06
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 40 0.034
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.060
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 37 0.24
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 1.7
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 1.7
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 2.2
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 33 3.0
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 3.9
UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 3.9
UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1; ... 31 9.0
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 170 bits (414), Expect = 1e-41
Identities = 85/147 (57%), Positives = 103/147 (70%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 140 bits (340), Expect = 1e-32
Identities = 72/150 (48%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 10 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
MGID K H R RT KS +V T+A FN+++L+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 187 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 366
P+S+SR+AR +K+ VVVGTV++D R++ PK TVAAL T ARA+I+ AGGE
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE 120
Query: 367 ILTFDQLALRAPTGRKTVLVQGRRNAREAV 456
+T DQLA+RAP G+ T++++G RN+REAV
Sbjct: 121 CITLDQLAVRAPKGQNTLILRGPRNSREAV 150
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 138 bits (335), Expect = 4e-32
Identities = 73/140 (52%), Positives = 96/140 (68%)
Frame = +1
Query: 37 DRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPPISLSRLARH 216
++K +RT KS D+ T++ FN +IL+RLFMS++NRPP+SLSRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 217 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 396
M+ +EG I VVVG V++D+R+Y VP + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 397 APTGRKTVLVQGRRNAREAV 456
P TVL++G +NAREAV
Sbjct: 126 LPL-TDTVLLRGPKNAREAV 144
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 133 bits (321), Expect = 2e-30
Identities = 62/103 (60%), Positives = 83/103 (80%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
TNAKFN I+L+RLFMSR N+ +SL+R+ R M K REG AVVVG +++DVR++ +PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQG 432
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQG 111
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 124 bits (298), Expect = 1e-27
Identities = 62/111 (55%), Positives = 83/111 (74%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
T+ FN+++L+RL M R + P+SLS+L++HM+K R AVVVGTV+ND R+ VPK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAV 456
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAV 148
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 118 bits (285), Expect = 5e-26
Identities = 69/149 (46%), Positives = 88/149 (59%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
M ID++ H RK + + T +KF + IL RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+S S+LA MKK E AV V TV+ D R Y VPKM V AL T+ A A I AGG+
Sbjct: 61 VSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKC 117
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNAREAV 456
L FD+LAL+APTGRKTVL++G+RN REA+
Sbjct: 118 LRFDELALKAPTGRKTVLIRGKRNVREAL 146
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 111 bits (268), Expect = 5e-24
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Frame = +1
Query: 10 MGIDI-NHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
MGID+ N +K R + S++ T+ FN+II +RL M + RP
Sbjct: 57 MGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKRFRP 116
Query: 187 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 366
P+SLS+L +HM + +AVVVG++++D RL++ M V AL TE AR RI+ AGGE
Sbjct: 117 PLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGE 174
Query: 367 ILTFDQLALRAPTGRKTVLVQGRRNAREA 453
LTFDQLALR PTG+ +L++G AR A
Sbjct: 175 CLTFDQLALRYPTGKDCILLRGPTKARTA 203
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 111 bits (267), Expect = 7e-24
Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 1/147 (0%)
Frame = +1
Query: 10 MGIDINHK-HDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 187 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGE 366
+S+SRLA M K RE IAVV TV+ND RL T+P+MT+ AL + AR+RI AGG
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGR 118
Query: 367 ILTFDQLALRAPTGRKTVLVQGRRNAR 447
++FD+L PTG VL+QGRR+ R
Sbjct: 119 CMSFDELLAEKPTGDNCVLLQGRRSCR 145
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 111 bits (266), Expect = 9e-24
Identities = 59/117 (50%), Positives = 82/117 (70%), Gaps = 6/117 (5%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKP------TREGLIAVVVGTVSNDVRL 285
T++ FN+++ +RL SR NR PISLSR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 286 YTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAV 456
+P M V AL ++ AR I+AAGGE LTFDQLA+ APTG+ T L++GR++ RE+V
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESV 156
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 108 bits (259), Expect = 7e-23
Identities = 58/111 (52%), Positives = 77/111 (69%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
T+++FN +LRRL +R R PIS+SRL + + + VVVGTV++D RL TVPK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNAREAV 456
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA+
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREAL 364
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 99.1 bits (236), Expect = 4e-20
Identities = 56/109 (51%), Positives = 72/109 (66%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
T++ FN +LRRL +R R PIS+SRL + + + VVVGTV++DVRL TVPK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 450
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R E
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPRVREE 439
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 94.3 bits (224), Expect = 1e-18
Identities = 48/91 (52%), Positives = 63/91 (69%)
Frame = +1
Query: 178 NRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAA 357
N+PP+SLSR+ MK P +E AVVVGT+++DV + VPK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 358 GGEILTFDQLALRAPTGRKTVLVQGRRNARE 450
GG+ LTFDQLAL +P TVL+ G R RE
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGRE 183
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 82.2 bits (194), Expect = 5e-15
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = +1
Query: 184 PPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGG 363
PP+ LSR+ R MK E A V+GTV++++R+ VPK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 364 EILTFDQLALRAPTG 408
+IL+FDQLA+ +P G
Sbjct: 107 KILSFDQLAMTSPKG 121
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 77.4 bits (182), Expect = 1e-13
Identities = 34/67 (50%), Positives = 45/67 (67%)
Frame = +1
Query: 7 GMGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
G+G+DI H DRKVRR E KSQD+ TN+ FN+++L+RLFMSR NRP
Sbjct: 109 GLGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRP 168
Query: 187 PISLSRL 207
P++LSR+
Sbjct: 169 PLALSRM 175
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 77.0 bits (181), Expect = 2e-13
Identities = 37/62 (59%), Positives = 46/62 (74%)
Frame = +1
Query: 271 NDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 450
+D R+ VPK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 451 AV 456
AV
Sbjct: 185 AV 186
Score = 55.2 bits (127), Expect = 6e-07
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
T+ FN+I+L+RL M R + P+SLS+L++HM+ +R AVV+GTV++ L +P
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 304 TVAALHVT 327
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 72.5 bits (170), Expect = 4e-12
Identities = 40/114 (35%), Positives = 65/114 (57%)
Frame = +1
Query: 7 GMGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
G+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+
Sbjct: 2 GIGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKL 60
Query: 187 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 348
P+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 61 PLLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 72.5 bits (170), Expect = 4e-12
Identities = 40/114 (35%), Positives = 65/114 (57%)
Frame = +1
Query: 7 GMGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRP 186
G+G+ ++ K +K + T KS D+ T +KFN + L+R FMS++N+
Sbjct: 2 GIGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKL 60
Query: 187 PISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARI 348
P+ LSRL R M ++G I VV+G+V++D+R+Y V + V L T++ R I
Sbjct: 61 PLLLSRLVRFM--DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 52.8 bits (121), Expect = 3e-06
Identities = 28/102 (27%), Positives = 56/102 (54%)
Frame = +1
Query: 133 KFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVA 312
KF + ++RR SR +R ISLS+L + K T + ++ V + ND R+ PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 313 ALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRR 438
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 39.5 bits (88), Expect = 0.034
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +1
Query: 217 MKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEILTFDQLALR 396
+ + +EG + VV G + +L K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 397 APTG 408
P G
Sbjct: 112 YPRG 115
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 38.7 bits (86), Expect = 0.060
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +1
Query: 181 RPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAG 360
R ++L+++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSM--PHKITLCPFGISGAAAEKVLSSG 103
Query: 361 GEILTFDQLALRAPTGRKTVLV 426
G + F +L PTG+ VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 36.7 bits (81), Expect = 0.24
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 139 NQIILRRLFMSRINRPPISLSRL-ARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAA 315
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKL--AHKITVAA 82
Query: 316 LHVTEKARARILAAGGEILTFDQLALRAPTG 408
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 1.7
Identities = 31/96 (32%), Positives = 47/96 (48%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
T A + + RL SR N +LSRL+R + + ++G S DV +
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSRTAGEDETILVPGKLLG--SGDV----IGSP 79
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGR 411
+VAA V+ AR++I AAGG ++T L P G+
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 33.9 bits (74), Expect = 1.7
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +1
Query: 127 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPT-REGLIAVVVGTVSNDVRLYTVPKM 303
NA + + RL R R +++ +L ++ +E +V G V D + T P +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGD-GVITQP-L 85
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTG 408
VAA + AR +I AAGGE LT +L P G
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEG 120
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 2.2
Identities = 27/94 (28%), Positives = 45/94 (47%)
Frame = +1
Query: 127 NAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMT 306
NA + + RL S ++LS +AR+ +V G V ++ L K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDL--TEKVN 80
Query: 307 VAALHVTEKARARILAAGGEILTFDQLALRAPTG 408
VAA ++KA+ +I +AGGE ++ D + P G
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKG 114
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +1
Query: 205 LARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAAL 318
+ + MK P E AVVVG V++DVR+ V ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 3.9
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +1
Query: 133 KFNQIILRRLFMSRINRPPI--SLSRLARHMKKPTRE------GLIAVVVGTVSNDVRLY 288
+F ++I L++S RP I S+ LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTAG--LGIV 1301
Query: 289 TVPKMTVAALH 321
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q2GZD3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 2471
Score = 32.7 bits (71), Expect = 3.9
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +1
Query: 229 TREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARIL 351
TRE + A VV + + Y VPK T+A+ TEKA ++L
Sbjct: 442 TREDISAAVVVCRDDQLMAYCVPKATIASAGKTEKALDQVL 482
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 32.7 bits (71), Expect = 3.9
Identities = 27/87 (31%), Positives = 44/87 (50%)
Frame = +1
Query: 148 ILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVT 327
I +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 328 EKARARILAAGGEILTFDQLALRAPTG 408
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
>UniRef50_Q1K398 Cluster: Hydroxyacylglutathione hydrolase; n=1;
Desulfuromonas acetoxidans DSM 684|Rep:
Hydroxyacylglutathione hydrolase - Desulfuromonas
acetoxidans DSM 684
Length = 249
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 436 GDPEPVLSYVQWAHGGLTGQTLESHLQQPRCGHELS 329
G+ EPVL Y++ HG L +H+ Q CG L+
Sbjct: 30 GEAEPVLDYLE-KHGRSLSLILNTHMHQDHCGGNLT 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,634,147
Number of Sequences: 1657284
Number of extensions: 8296368
Number of successful extensions: 20876
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 20414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20858
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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