Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C24
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18 pro... 171 1e-42
BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18 p... 171 1e-42
BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18 p... 171 1e-42
AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18 p... 171 1e-42
BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18 p... 169 5e-42
DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18 p... 142 7e-34
X77278-1|CAA54493.1| 507|Homo sapiens HYL tyrosine kinase protein. 29 5.8
S75164-1|AAC60645.1| 507|Homo sapiens megakaryocyte-associated ... 29 5.8
S71669-1|AAB30995.1| 465|Homo sapiens lsk protein. 29 5.8
L18974-1|AAA16703.1| 527|Homo sapiens tyrosine kinase protein. 29 5.8
BC003109-1|AAH03109.1| 507|Homo sapiens megakaryocyte-associate... 29 5.8
BC000114-1|AAH00114.1| 507|Homo sapiens megakaryocyte-associate... 29 5.8
AC005777-1|AAC62843.1| 507|Homo sapiens MATK_HUMAN protein. 29 5.8
>L11566-1|AAA16329.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 171 bits (415), Expect = 1e-42
Identities = 85/147 (57%), Positives = 103/147 (70%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>BC009708-1|AAH09708.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 171 bits (415), Expect = 1e-42
Identities = 85/147 (57%), Positives = 103/147 (70%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>BC000374-1|AAH00374.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 171 bits (415), Expect = 1e-42
Identities = 85/147 (57%), Positives = 103/147 (70%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>AB061825-1|BAB79463.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 171 bits (415), Expect = 1e-42
Identities = 85/147 (57%), Positives = 103/147 (70%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>BC021743-1|AAH21743.1| 188|Homo sapiens ribosomal protein L18
protein.
Length = 188
Score = 169 bits (410), Expect = 5e-42
Identities = 84/147 (57%), Positives = 102/147 (69%)
Frame = +1
Query: 10 MGIDINHKHDRKVRRTEVKSQDVXXXXXXXXXXXXXXXTNAKFNQIILRRLFMSRINRPP 189
MG+DI H DRKVRR E KSQD+ TN+ FNQ++L+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 190 ISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKMTVAALHVTEKARARILAAGGEI 369
+ LSR+ R MK P RE AVVVGT+++DVR+ VPK+ V AL VT +AR+RIL AGG+I
Sbjct: 61 LCLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKI 120
Query: 370 LTFDQLALRAPTGRKTVLVQGRRNARE 450
LTFDQLAL +P G TVL+ G R RE
Sbjct: 121 LTFDQLALDSPKGCGTVLLSGPRKGRE 147
>DQ403032-1|ABD77165.1| 164|Homo sapiens ribosomal protein L18
protein.
Length = 164
Score = 142 bits (343), Expect = 7e-34
Identities = 69/109 (63%), Positives = 85/109 (77%)
Frame = +1
Query: 124 TNAKFNQIILRRLFMSRINRPPISLSRLARHMKKPTREGLIAVVVGTVSNDVRLYTVPKM 303
TN+ FNQ++L+RLFMSR NRPP+SLSR+ R MK P RE AVVVGT+++DVR+ VPK+
Sbjct: 16 TNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKL 75
Query: 304 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGRKTVLVQGRRNARE 450
V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R RE
Sbjct: 76 KVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPRKGRE 124
>X77278-1|CAA54493.1| 507|Homo sapiens HYL tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>S75164-1|AAC60645.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>S71669-1|AAB30995.1| 465|Homo sapiens lsk protein.
Length = 465
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 73 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 101
>L18974-1|AAA16703.1| 527|Homo sapiens tyrosine kinase protein.
Length = 527
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>BC003109-1|AAH03109.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>BC000114-1|AAH00114.1| 507|Homo sapiens megakaryocyte-associated
tyrosine kinase protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
>AC005777-1|AAC62843.1| 507|Homo sapiens MATK_HUMAN protein.
Length = 507
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -2
Query: 427 EPVLSYVQWAHGGLTGQTLESHLQQPRCG 341
+P LS + W HG ++GQ LQ P G
Sbjct: 114 DPKLSLMPWFHGKISGQEAVQQLQPPEDG 142
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,903,664
Number of Sequences: 237096
Number of extensions: 1301401
Number of successful extensions: 2280
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2280
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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