Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C23
(453 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0934 - 12513810-12513834,12513918-12513970,12514212-125145... 202 1e-52
03_05_0125 - 21039767-21039791,21039876-21039922,21040220-210405... 200 3e-52
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 33 0.081
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 33 0.081
01_06_1453 - 37465665-37466627 31 0.57
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 29 1.7
11_01_0396 + 3003779-3005203 29 2.3
01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416 29 2.3
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580... 28 3.1
04_03_0266 + 13648287-13649099,13649186-13649524 28 3.1
10_06_0028 - 9802362-9802475,9802919-9803090,9803167-9803208,980... 28 4.0
08_02_0630 - 19483485-19483671,19483761-19484179,19485180-194854... 28 4.0
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 28 4.0
02_02_0421 - 10042184-10042197,10042442-10042822,10044158-100442... 28 4.0
01_01_0826 + 6431621-6431917,6432356-6432505,6432614-6432796,643... 28 4.0
12_01_0476 + 3738526-3738567,3738695-3738739,3739240-3739601,373... 27 5.3
10_08_0781 + 20509033-20509714,20510048-20510191,20510604-205107... 27 5.3
10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541... 27 5.3
02_05_0521 - 29726985-29727605 27 5.3
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 27 5.3
12_01_0773 - 7039294-7039422,7039440-7039479,7039557-7039649,703... 27 7.1
11_06_0711 - 26508228-26508488,26508970-26509084,26509179-265094... 27 7.1
03_05_0567 - 25672780-25672965,25673043-25673135,25673237-256732... 27 7.1
09_04_0254 + 16131779-16132475,16132609-16132768,16132944-161329... 27 9.3
>03_02_0934 -
12513810-12513834,12513918-12513970,12514212-12514525,
12514608-12514730,12515710-12515821
Length = 208
Score = 202 bits (492), Expect = 1e-52
Identities = 91/144 (63%), Positives = 110/144 (76%)
Frame = +2
Query: 20 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 199
M SLKLQKRLAASV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 200 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 379
+R R+ EA++KGRH G+GKRRGT AR+P K LW AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 380 HSLYMKAKGNVFKNKRVLMEYIHR 451
H +YMK KGN+FKNKRVLME IH+
Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHK 144
>03_05_0125 -
21039767-21039791,21039876-21039922,21040220-21040533,
21040613-21040735,21041599-21041710
Length = 206
Score = 200 bits (489), Expect = 3e-52
Identities = 90/144 (62%), Positives = 110/144 (76%)
Frame = +2
Query: 20 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 199
M SLKLQKRLA+SV++CGK KVWLDPNE+NEI+ NSRQNIRK++KDG +IKKP +HSR
Sbjct: 1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSR 60
Query: 200 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 379
+R R+ EA++KGRH G+GKRRGT AR+P K LW AKKID+H+Y
Sbjct: 61 SRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMY 120
Query: 380 HSLYMKAKGNVFKNKRVLMEYIHR 451
H +YMK KGN+FKNKRVLME IH+
Sbjct: 121 HDMYMKVKGNMFKNKRVLMESIHK 144
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 33.5 bits (73), Expect = 0.081
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 35 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 205
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 206 VRKNTEARRKGRHCGFG 256
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 33.5 bits (73), Expect = 0.081
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 35 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 205
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 699 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 756
Query: 206 VRKNTEARRKGRHCGFG 256
+ T RKGR GFG
Sbjct: 757 DEETTSISRKGRAQGFG 773
>01_06_1453 - 37465665-37466627
Length = 320
Score = 30.7 bits (66), Expect = 0.57
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = -3
Query: 289 WHSSISCTSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHL---TDVLSGISI 119
W S S P + AT T+ + LC A+ A + F DQ+ D L TDV S+
Sbjct: 206 WSSPASGNDPTSTAT-TATTSMLCTDASVQAALGELNFAMDQSCFDSLGLPTDVAGAGSL 264
Query: 118 SDFIDLV 98
S + +V
Sbjct: 265 SSWCSIV 271
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 29.1 bits (62), Expect = 1.7
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +2
Query: 104 INEIANTNSRQNIRKMIKDGLVIK-KPVAVHSRARVRKNTEARRKGRHCGFGKRRGTAN 277
+ E N NS + + GL+ + KP+ V S RVR + K GK R TAN
Sbjct: 198 LGEANNDNSEKLEELFLDKGLLDELKPIRVESGKRVRASIRIIEKMMSSRVGKIRNTAN 256
>11_01_0396 + 3003779-3005203
Length = 474
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 111 SLISFGSSHTFFLPHRITEAASLFCNFRELILARSSC 1
SL+S G+ +T L + I + C+ REL++ +SC
Sbjct: 114 SLLSLGTENTPVLKNVIESLETKICDVRELVVLLASC 150
>01_05_0450 + 22357006-22357323,22357365-22357713,22358175-22358416
Length = 302
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 161 GLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTA 274
G+ +K+ H + + R+GRH G+G+RR +A
Sbjct: 212 GITLKEDEKQHGTSSSAADGGGLRRGRHDGWGRRRSSA 249
>11_05_0010 -
18356835-18357080,18357475-18357672,18357780-18358046,
18358870-18359067,18359151-18359417,18359524-18359724,
18359807-18361363,18361499-18361859,18362602-18363467
Length = 1386
Score = 28.3 bits (60), Expect = 3.1
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 262 PLTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKP 86
P KA ++S LC + S+W ++ I+D + DVL I ID +W KP
Sbjct: 248 PNVKAVLSSI---LCQVSQLKYENFSSW--GEKEIIDKIRDVLKDIRYFIIIDDIWDKP 301
>04_03_0266 + 13648287-13649099,13649186-13649524
Length = 383
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 74 KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 220
K+K+ L +E ++ T R+ RK+ K + KK + H ++RK++
Sbjct: 320 KRKLVLSDDEGDDAEKTRDRETTRKLPKQA-IPKKKTSSHPMPKIRKSS 367
>10_06_0028 -
9802362-9802475,9802919-9803090,9803167-9803208,
9803344-9804011,9804098-9804418,9804495-9804833,
9804856-9805109,9805300-9805510
Length = 706
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 89 LDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVH 193
LDP +NE N R NI IKD L ++ +H
Sbjct: 628 LDPAVVNETTLKNDRANIVDYIKDCLFARQRQGLH 662
>08_02_0630 -
19483485-19483671,19483761-19484179,19485180-19485413,
19485714-19485851
Length = 325
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +3
Query: 195 PALVFAKTQRRAGKDVTVALVRGEV 269
P LVF KT G V VAL+ G+V
Sbjct: 70 PVLVFPKTSTDGGSSVIVALLPGDV 94
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 27.9 bits (59), Expect = 4.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 155 KDGLVIKKPVAVHSRARVRKNTEARRKGRHC---GFGKRRGTANAR 283
KDG ++ + +RA R +T+A R+ HC G+G RR + R
Sbjct: 174 KDGRNLQAGAQLCARAASRGHTDALRELGHCVSDGYGVRRSLSGGR 219
>02_02_0421 -
10042184-10042197,10042442-10042822,10044158-10044261,
10044634-10044734,10044806-10045147,10045981-10046158,
10047696-10047776,10049190-10049449
Length = 486
Score = 27.9 bits (59), Expect = 4.0
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +2
Query: 20 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 199
+ SL L R+ C +V+ D + N +NIRK + ++++ P+A +
Sbjct: 103 IESLSLMIRMLL-YCECFAARVYCDGCHCSPCGNKIENENIRKEAIETILLRNPLAFQPK 161
Query: 200 ARVRKNTEARRK 235
NT RK
Sbjct: 162 IENSPNTVTVRK 173
>01_01_0826 +
6431621-6431917,6432356-6432505,6432614-6432796,
6433305-6433385,6433548-6433586,6433646-6433849,
6433933-6434073,6434270-6434437,6434498-6434518
Length = 427
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 222 RRAGKDVTVALVRGEVQLMLECHKKN 299
RRAG +VTVA V ++Q++ HK N
Sbjct: 272 RRAGANVTVASVEDKLQVVTRRHKFN 297
>12_01_0476 +
3738526-3738567,3738695-3738739,3739240-3739601,
3739691-3740057,3740490-3740555,3741630-3741743
Length = 331
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 44 RLAASVMRCGKKKVWLDPNEINEIA--NTNSRQNIRKMIKDGLV 169
R A RC + LDPNEI ++ SR+ + +++ G++
Sbjct: 236 RFALHCRRCERDATPLDPNEIKHVSPYGITSREQVLEVVARGIL 279
>10_08_0781 +
20509033-20509714,20510048-20510191,20510604-20510719,
20511356-20511520,20511822-20512043,20512613-20512735
Length = 483
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 86 WLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGK 259
++D N+ + + +SR ++ ++ GL +K PV + VR E GR G G+
Sbjct: 29 YVDGNDTEDCYSGSSRASLAGALRQGLNLKSPVLGYKTPNVR---ELYTLGRELGQGQ 83
>10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,
5416037-5418047
Length = 1369
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/57 (24%), Positives = 25/57 (43%)
Frame = -3
Query: 259 LTKATVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIK 89
+ +A+ L + S G+ F + I DHL + +G + I +VWI+
Sbjct: 1264 IIRASTVHDEKTLLRYVRQSPGVTEPCFSRGRVITDHLLKISNGAQRWELISMVWIE 1320
>02_05_0521 - 29726985-29727605
Length = 206
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 131 RQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK-GRHCGFGKRRGTANARM-PQKELW 304
R +R M++ GL + +AV A R + EARR+ R +RRG A + P W
Sbjct: 54 RAAVRGMVRGGLAPRARLAVLRAAAFRDSREARRRIRRDRRRRRRRGMMVAALSPNHAFW 113
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.5 bits (58), Expect = 5.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 74 KKKVWLDPN-EINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRK 235
K KVW P E+ + +R + +K + +KP A R RVRK TEA K
Sbjct: 681 KPKVWSRPRKEVEPVGKPKARGHPKKQAEPD---EKPKA---RGRVRKTTEANGK 729
>12_01_0773 -
7039294-7039422,7039440-7039479,7039557-7039649,
7039900-7040010,7040091-7040342,7040407-7040903,
7040923-7041777,7041883-7042143,7042183-7042551,
7042637-7042876
Length = 948
Score = 27.1 bits (57), Expect = 7.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -3
Query: 130 GISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 38
GIS+ D +DLV W K +FF N G KP+L
Sbjct: 462 GISVLGDAVDLVILWHKNDIFFGLGTNAGEKPVL 495
>11_06_0711 -
26508228-26508488,26508970-26509084,26509179-26509451,
26509629-26510197,26510489-26510597,26511002-26511544,
26511645-26511763,26511893-26512120,26512199-26512315,
26512410-26512506,26513169-26513569
Length = 943
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = -3
Query: 160 ILDHLTDVLSGISISDFIDLVWIKPHLFFTASH 62
+L H L + S + L W+KP F+ SH
Sbjct: 490 LLKHAKGSLISVGWSVILPLSWVKPFWFYLVSH 522
>03_05_0567 -
25672780-25672965,25673043-25673135,25673237-25673297,
25673385-25673495,25673640-25673825,25673909-25675287,
25675393-25675776,25675813-25676061,25676147-25676386
Length = 962
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = -3
Query: 157 LDHLTDVLSGISI-SDFIDLV--WIKPHLFFTASHNRGCKPLL 38
+D+LT GIS+ D +DLV W K +FF + G KP+L
Sbjct: 456 IDYLT--ADGISVLGDAVDLVILWHKNDIFFGLGTDAGEKPVL 496
>09_04_0254 +
16131779-16132475,16132609-16132768,16132944-16132992,
16133158-16133271,16133434-16133958,16135538-16135969,
16138882-16138956,16139530-16139625,16140610-16140725,
16140822-16140992,16141080-16141239,16141328-16141513,
16141624-16141752,16141837-16141915,16142034-16142143
Length = 1032
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 200 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELW 304
AR + + +++GR G+G R+ A R+ +E W
Sbjct: 396 ARGGQQQQQQQEGRRGGWGVRKAAARVRVAAEENW 430
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,715,739
Number of Sequences: 37544
Number of extensions: 246010
Number of successful extensions: 713
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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