Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C22
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.7  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   7.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   7.5  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   9.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +2

Query: 185 QCGRVINESPLVVLGTKTLEGQWPWQ 262
           QC ++ N+SP  +      +G  PW+
Sbjct: 43  QCNKLSNKSPPPLADAAVGKGFHPWK 68


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 81  GHLRQHSRLNHVNRRHQFNHQVHPHQQ 161
           GH  Q     H    HQ  H ++  QQ
Sbjct: 168 GHHMQEQHPQHHQPHHQQQHMMYGGQQ 194


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = +3

Query: 81  GHLRQHSRLNHVNRRHQFNHQVHPHQQ 161
           GH  Q     H    HQ  H ++  QQ
Sbjct: 170 GHHMQEQHPQHHQPHHQQQHMMYGGQQ 196


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 389 TNSLIVFLGKHNLQTTTFGVQIKFVEQVLIHPEY 490
           T S + FLGK  ++T    + I  V  V   P Y
Sbjct: 259 TRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 389 TNSLIVFLGKHNLQTTTFGVQIKFVEQVLIHPEY 490
           T S + FLGK  ++T    + I  V  V   P Y
Sbjct: 259 TRSSLAFLGKAKVRTLKMTIIIVLVFFVCWTPYY 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,288
Number of Sequences: 336
Number of extensions: 2452
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)