Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C22
(575 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 56 2e-08
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 43 1e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 42 4e-04
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 37 0.009
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 37 0.012
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 35 0.048
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 33 0.15
AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical ... 33 0.15
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 32 0.25
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 32 0.25
U41038-2|AAX88827.1| 635|Caenorhabditis elegans Serotonin/octop... 29 3.1
U41038-1|AAK29709.2| 683|Caenorhabditis elegans Serotonin/octop... 29 3.1
AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin rec... 29 3.1
AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin rec... 29 3.1
AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical ... 29 3.1
AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical ... 29 3.1
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 28 5.5
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 28 5.5
AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine re... 28 5.5
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 28 5.5
Z50857-2|CAA90718.1| 219|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein. 27 7.2
AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical ... 27 7.2
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +2
Query: 218 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNS 397
VV G +T+ G +PW AL K T + CG +++ H+ITAAHC E +R+ +S
Sbjct: 27 VVGGFETVPGAFPWTAAL-RNKATKAHH-CGASILDKTHLITAAHC--FEEDERV---SS 79
Query: 398 LIVFLGKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITL-FESVTYTNRVQPAC 574
V +G + T QI +++++ +P Y + HDI I+ + + + + QP C
Sbjct: 80 YEVVVGDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPIC 138
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 43.2 bits (97), Expect = 1e-04
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Frame = +2
Query: 227 GTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNSLIV 406
G+++ WPW V L CGG+L+ ++TAAHC + + S V
Sbjct: 61 GSESSPHSWPWTVQLLSRL---GHHRCGGSLIDPNFVLTAAHCFAKD-----RRPTSYSV 112
Query: 407 FLGKHNLQTTTFGVQIKFVEQVLIHPEYN---PSNYYHDIGIITLFESVTYTNRVQPAC 574
+G H + G + V V IHP YN PS+Y D I+ + V + +P C
Sbjct: 113 RVGGHR---SGSGSPHR-VTAVSIHPWYNIGFPSSY--DFAIMRIHPPVNTSTTARPIC 165
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 254 PWQVAL-YETKITDSKFMCGGTLVTHRHIITAAHC 355
PW V + + + D + +CGGTL+T +H++TAAHC
Sbjct: 44 PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = +2
Query: 218 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIIT 343
V+ GT G+ PW VALY D GTLV++RHII+
Sbjct: 50 VLNGTIANAGETPWTVALYIPDHLDHSVYTTGTLVSNRHIIS 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 36.7 bits (81), Expect = 0.012
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 209 SPLVVLGTKTLEGQWPWQVALY-ETKITDSKFMCGGTLVTHRHIITAAHC 355
S V G + + PW V Y +K S C GT+V+ RHI+ A HC
Sbjct: 160 SAKVYNGRDASQSEAPWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 34.7 bits (76), Expect = 0.048
Identities = 24/118 (20%), Positives = 47/118 (39%)
Frame = +2
Query: 221 VLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNSL 400
++G +++ W L +CG T++ ++TAAHC T S
Sbjct: 38 IIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQ------LQTRSF 91
Query: 401 IVFLGKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITLFESVTYTNRVQPAC 574
+ N + +F V++ IH YN +DI ++ + ++ ++P C
Sbjct: 92 VYVREPKNNRERSFS-----VKEAYIHSGYNNQTADNDIALLRISSDLSKLG-IKPVC 143
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +2
Query: 188 CGRVINESPLVVLGTKTLEGQWPWQVALY---ETKITDSKFM--CGGTLVTHRHIITAAH 352
CG+ N + G K + PW V + K D + C GTL + RHI+TA H
Sbjct: 33 CGK--NVKSKIFNGRKAEIDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATH 90
Query: 353 C 355
C
Sbjct: 91 C 91
>AF078157-9|AAG24075.3| 425|Caenorhabditis elegans Hypothetical
protein F25E5.4 protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 179 EMQCGRVINESPLVVLGTKTLEGQWPWQVALYETKITDSK---FMCGGTLVTHRHIIT 343
+++CG + + G G PW V++Y T SK F+ GTL++ RH++T
Sbjct: 29 QLKCG-IKGSQREFINGDTARPGDHPWAVSVYVKANTTSKNGVFLGPGTLISARHVLT 85
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/63 (23%), Positives = 24/63 (38%)
Frame = +2
Query: 218 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNS 397
V+LGT W W V + T + GT+ + + + HC H K+
Sbjct: 270 VLLGTVAQMDHWIWSVTVRPNSQTVAMGCVDGTIACYNLVFSTVHCVDHARYANRKSMTD 329
Query: 398 LIV 406
+ V
Sbjct: 330 VFV 332
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/63 (23%), Positives = 24/63 (38%)
Frame = +2
Query: 218 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNS 397
V+LGT W W V + T + GT+ + + + HC H K+
Sbjct: 270 VLLGTVAQMDHWIWSVTVRPNSQTVAMGCVDGTIACYNLVFSTVHCVDHARYANRKSMTD 329
Query: 398 LIV 406
+ V
Sbjct: 330 VFV 332
>U41038-2|AAX88827.1| 635|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform b
protein.
Length = 635
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 212 PLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNT 391
PL ++ + G W W V++ + F+C ++V H +I+ R +N
Sbjct: 62 PLSIV-VEVRHGVWTWSVSMCLLYVYSDVFLCSASIV-HMSVISLDRYLGISQPLRTRNR 119
Query: 392 NSLIVFL 412
+ ++F+
Sbjct: 120 SKTLIFI 126
>U41038-1|AAK29709.2| 683|Caenorhabditis elegans
Serotonin/octopamine receptor familyprotein 1, isoform a
protein.
Length = 683
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 212 PLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNT 391
PL ++ + G W W V++ + F+C ++V H +I+ R +N
Sbjct: 110 PLSIV-VEVRHGVWTWSVSMCLLYVYSDVFLCSASIV-HMSVISLDRYLGISQPLRTRNR 167
Query: 392 NSLIVFL 412
+ ++F+
Sbjct: 168 SKTLIFI 174
>AF031415-1|AAC15778.1| 635|Caenorhabditis elegans serotonin
receptor protein.
Length = 635
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 212 PLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNT 391
PL ++ + G W W V++ + F+C ++V H +I+ R +N
Sbjct: 62 PLSIV-VEVRHGVWTWSVSMCLLYVYSDVFLCSASIV-HMSVISLDRYLGISQPLRTRNR 119
Query: 392 NSLIVFL 412
+ ++F+
Sbjct: 120 SKTLIFI 126
>AF031414-1|AAC15827.1| 683|Caenorhabditis elegans serotonin
receptor protein.
Length = 683
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +2
Query: 212 PLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNT 391
PL ++ + G W W V++ + F+C ++V H +I+ R +N
Sbjct: 110 PLSIV-VEVRHGVWTWSVSMCLLYVYSDVFLCSASIV-HMSVISLDRYLGISQPLRTRNR 167
Query: 392 NSLIVFL 412
+ ++F+
Sbjct: 168 SKTLIFI 174
>AC024859-9|ABQ13045.1| 296|Caenorhabditis elegans Hypothetical
protein Y71H2AM.14a protein.
Length = 296
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 RVINESPLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHS 373
RV+N +P++ + K EG W I + + G ++ I + C +
Sbjct: 9 RVLNRTPILFVEDKNYEGMWKSTKEAIPGLIEKFQIVHGKVPSHNKPIQFSKLCCVYVDP 68
Query: 374 KRLKNTNSLIVFLGKHNLQTTTF--GVQIKFVEQV 472
+ L+N N + L H Q+ + G+Q + + V
Sbjct: 69 RVLENMNDEFLHLDSHFYQSWKYFAGMQRELIGYV 103
>AC024859-8|ABQ13046.1| 337|Caenorhabditis elegans Hypothetical
protein Y71H2AM.14b protein.
Length = 337
Score = 28.7 bits (61), Expect = 3.1
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 194 RVINESPLVVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHS 373
RV+N +P++ + K EG W I + + G ++ I + C +
Sbjct: 50 RVLNRTPILFVEDKNYEGMWKSTKEAIPGLIEKFQIVHGKVPSHNKPIQFSKLCCVYVDP 109
Query: 374 KRLKNTNSLIVFLGKHNLQTTTF--GVQIKFVEQV 472
+ L+N N + L H Q+ + G+Q + + V
Sbjct: 110 RVLENMNDEFLHLDSHFYQSWKYFAGMQRELIGYV 144
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 383 KNTNSLIVFLGKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITLFESVTYTNR 559
+N ++ + F + +L+ T FGV +V H E +P YYH G + E + + +
Sbjct: 13 RNADAFLPFFNEDDLKYT-FGVDTH--AEVPNHEEIDPVPYYHQNGSLHKLEFMAFNKK 68
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 383 KNTNSLIVFLGKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITLFESVTYTNR 559
+N ++ + F + +L+ T FGV +V H E +P YYH G + E + + +
Sbjct: 13 RNADAFLPFFNEDDLKYT-FGVDTH--AEVPNHEEIDPVPYYHQNGSLHKLEFMAFNKK 68
>AF016420-9|AAB65304.1| 410|Caenorhabditis elegans Serpentine
receptor, class r protein6 protein.
Length = 410
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = -3
Query: 249 CPSRVFVPSTTKGLSLITLPHCISDPLTVIVGVDALDXXXXXXXXXXXXXXXXXXVQFCV 70
CPS + +PST + LS + + P I+ + LD + V
Sbjct: 15 CPSIIEIPSTKEPLS----ENALLGPFRKIIKITGLDCSLIARAEFNPSLRIKSILTRIV 70
Query: 69 ILVCGRLVFSSMSVKSKA 16
LV +VF M++ SKA
Sbjct: 71 ALVVVAIVFFRMAIYSKA 88
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +2
Query: 383 KNTNSLIVFLGKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITLFESVTYTNR 559
+N ++ + F + +L+ T FGV +V H E +P YYH G + E + + +
Sbjct: 13 RNADAFLPFFNEDDLKYT-FGVDTH--AEVPNHEEIDPVPYYHQNGSLHKLEFMAFNKK 68
>Z50857-2|CAA90718.1| 219|Caenorhabditis elegans Hypothetical
protein F11A1.2 protein.
Length = 219
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 426 RLCLPKNTIKLFVFFKRFECSCV 358
R + K T+K+ VF+ R ECS V
Sbjct: 186 RAAITKYTVKIIVFYARKECSVV 208
>AF304125-1|AAG50238.1| 542|Caenorhabditis elegans 1D304 protein.
Length = 542
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 297 LLSVILVS*RATCQGHCPSRVFVPSTTKGLSLITLPHCISDPLTVIV 157
L+ ++LVS +CQ C + KG SL ++P + DP T ++
Sbjct: 6 LILLVLVSGVISCQSGCKCPTKTTAVCKGSSLRSIP-ILLDPRTTVL 51
>AC024201-8|AAF36020.1| 542|Caenorhabditis elegans Hypothetical
protein Y71F9B.8 protein.
Length = 542
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 297 LLSVILVS*RATCQGHCPSRVFVPSTTKGLSLITLPHCISDPLTVIV 157
L+ ++LVS +CQ C + KG SL ++P + DP T ++
Sbjct: 6 LILLVLVSGVISCQSGCKCPTKTTAVCKGSSLRSIP-ILLDPRTTVL 51
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 452 IKFVEQVLIHPEYNPSNYYHD 514
I FV +VL HPE+ N Y D
Sbjct: 435 IDFVRRVLAHPEFAAGNVYTD 455
>Z78013-9|CAB01420.2| 297|Caenorhabditis elegans Hypothetical
protein F15B9.5 protein.
Length = 297
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 302 MCGGTLVTHRHIITAAHC 355
+CGG L+ +IT+AHC
Sbjct: 45 VCGGVLIAPSIVITSAHC 62
>Z35603-2|CAA84674.1| 418|Caenorhabditis elegans Hypothetical
protein T02C12.2 protein.
Length = 418
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 239 LEGQWPWQVALYETKITDSKFMCGGTLVTHRHIIT 343
LEG Q +E D KF+ LV+H+H+I+
Sbjct: 86 LEGSSDVQTRRFEDMKGDRKFLERSPLVSHKHVIS 120
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,273,339
Number of Sequences: 27780
Number of extensions: 237297
Number of successful extensions: 628
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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