Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C22
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    58   6e-11
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   5.0  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   5.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   5.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 58.0 bits (134), Expect = 6e-11
 Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 6/125 (4%)
 Frame = +2

Query: 218 VVLGTKTLEGQWPWQVALYETKITDSKFMCGGTLVTHRHIITAAHCTTHEHSKRLKNTNS 397
           +V GT T   ++P    +  T   +   +CG T+++ R+++TAAHC   E      NT  
Sbjct: 161 IVGGTNTGINEFPMMAGIKRTY--EPGMICGATIISKRYVLTAAHCIIDE------NTTK 212

Query: 398 LIVFLGKH--NLQTTTFGVQIKFVEQVLIHPEYN----PSNYYHDIGIITLFESVTYTNR 559
           L + +G+H  + +T T    +  + +V+IHP+Y+         +DI ++   + + + ++
Sbjct: 213 LAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDK 272

Query: 560 VQPAC 574
           V PAC
Sbjct: 273 VGPAC 277


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +2

Query: 413 GKHNLQTTTFGVQIKFVEQVLIHPEYNPSNYYHDIGIITLFESVTYTNRVQ 565
           GK+N Q     V       +L H E   S +  DIG+   +  V     +Q
Sbjct: 185 GKNNQQNILIPVNYS---ALLSHDEQQLSYFTQDIGLAAYYAQVNLAGYIQ 232


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 452 IKFVEQVLIHPEYNPSNYY 508
           I   E  L++PE NPS +Y
Sbjct: 31  IHIPEHWLVYPEPNPSLHY 49


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/23 (26%), Positives = 13/23 (56%)
 Frame = +2

Query: 329 RHIITAAHCTTHEHSKRLKNTNS 397
           + +I   HC  +  +  ++NTN+
Sbjct: 406 KELIRNTHCVNNNQNDNIQNTNN 428


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 96  HSRLNHVNRRHQFNHQVHPH 155
           +SR+ ++NR H F +   P+
Sbjct: 221 YSRVRNLNRTHGFPNDAQPY 240


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,478
Number of Sequences: 438
Number of extensions: 3140
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)