Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C21
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpa...    81   3e-16
Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical pr...    30   0.62 
U88311-2|AAB42350.2|  529|Caenorhabditis elegans Udp-glucuronosy...    30   0.82 
U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical pr...    29   1.4  
Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical pr...    27   4.4  
AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    27   5.8  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    27   5.8  
AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical ...    27   5.8  
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p...    27   7.7  
AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical...    27   7.7  

>U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpase
           protein 10 protein.
          Length = 126

 Score = 81.0 bits (191), Expect = 3e-16
 Identities = 47/113 (41%), Positives = 60/113 (53%)
 Frame = +2

Query: 89  MASQTQGIQQLLAAEKRAAEKVSXXXXXXXXXXXXXXXXXXDEVXXXXXXXXXXXXXXXA 268
           MASQTQGIQQLLAAEKRAAEK++                   EV                
Sbjct: 1   MASQTQGIQQLLAAEKRAAEKINEARKRKLQRTKQAKQEAQAEVEKYKQQREAEFKAFEQ 60

Query: 269 KHMGTREGVAAKIDAETRVKIDEMNKMVQIQKEAVIKDILNLVYDIKPELHIN 427
           +++GT+E + +KI  +T  +I  M + V   K+AVI  +L LV DIKPELH N
Sbjct: 61  QYLGTKEDIESKIRRDTEDQISGMKQSVAGNKQAVIVRLLQLVCDIKPELHHN 113


>Z66521-2|CAA91395.1|  312|Caenorhabditis elegans Hypothetical
           protein W02B12.3a protein.
          Length = 312

 Score = 30.3 bits (65), Expect = 0.62
 Identities = 20/75 (26%), Positives = 34/75 (45%)
 Frame = +3

Query: 93  RARHRGSNNYWLLKNAPPKRSQRRGSEKRNA*SKLRKRPKMR*KSTDKNVRGNSKSLKPS 272
           R+R R S+       +PPKRS+R    K  + S+ R     + +S  ++ +   +S  PS
Sbjct: 225 RSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVDRS--PS 282

Query: 273 TWAHGKVSLRKSTPR 317
                +    K +PR
Sbjct: 283 PPRGSRSPSEKGSPR 297



 Score = 27.1 bits (57), Expect = 5.8
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 150 RSQRRGSEKRNA*SKLRKRPKMR*KSTDKNVRGNSKSLKPSTWAHGKVSLRKS 308
           RS+ R  ++R + S+   R K R +S  K  R  SKS   S         RKS
Sbjct: 215 RSRSRSRDRRRSRSRSSSRSKSRSRSPPKRSRRESKSKSRSRSRSRSADNRKS 267


>U88311-2|AAB42350.2|  529|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein26 protein.
          Length = 529

 Score = 29.9 bits (64), Expect = 0.82
 Identities = 12/33 (36%), Positives = 23/33 (69%)
 Frame = -2

Query: 390 LRMSLITASFWICTILFISSIFTLVSASIFAAT 292
           +RMS+++ S  +CT+  +SS+  LV +  +AA+
Sbjct: 2   IRMSVVSISLVLCTLSLVSSLNILVHSPAYAAS 34


>U40945-1|AAA81719.2|  656|Caenorhabditis elegans Hypothetical
           protein F10D7.1 protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 1.4
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = +3

Query: 78  VFRKWRARHRGSNNYWLLKNAPPKRSQRRGSEKRNA*SKLRKRPKMR*KSTDKNVRGNSK 257
           + RK R RH        +    P   QR   E +   S   KR K   +STDK   G+ K
Sbjct: 307 ILRKLRIRHANEKEQTYV----PPEFQRYLIETKENRSVRSKRVKSEFQSTDKKRAGSEK 362

Query: 258 SLKPST 275
             +P+T
Sbjct: 363 QKRPAT 368


>Z71262-4|CAA95814.1|  775|Caenorhabditis elegans Hypothetical
           protein F22D6.5 protein.
          Length = 775

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/54 (29%), Positives = 29/54 (53%)
 Frame = +3

Query: 84  RKWRARHRGSNNYWLLKNAPPKRSQRRGSEKRNA*SKLRKRPKMR*KSTDKNVR 245
           +K  A+    NN   L+N PP+R + + +E+R+   + R+  + R +S  K  R
Sbjct: 97  KKKEAKESSRNNEDELRN-PPRRERSKSAERRDRELRERRDAERRDRSLSKERR 149


>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +2

Query: 287 EGVAAKIDAETRVKIDEMNKMVQIQKEAVIKDILNLVYDIKPELHINY 430
           E V  K   ++++KI +     +I+  AV+KD++     + PE+ +NY
Sbjct: 159 ENVMLKQRGDSQIKIIDFGLSREIEPGAVVKDMVGTPEFVAPEV-VNY 205


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = +2

Query: 287 EGVAAKIDAETRVKIDEMNKMVQIQKEAVIKDILNLVYDIKPELHINY 430
           E V  K   ++++KI +     +I+  AV+KD++     + PE+ +NY
Sbjct: 159 ENVMLKQRGDSQIKIIDFGLSREIEPGAVVKDMVGTPEFVAPEV-VNY 205


>AC087232-1|AAK09079.2|  574|Caenorhabditis elegans Hypothetical
           protein Y92H12BR.7 protein.
          Length = 574

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +2

Query: 281 TREGVAAKIDAETRVKIDEMNKMVQIQKEAVIKDILNLVYD 403
           T + +A K+D E    +D MNK V  +K A +  I   + D
Sbjct: 513 TAQELAEKLDPELVKAVDHMNKAVAREKNASMTSIFRNLND 553


>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 332 DEMNKMVQIQKEAVIKDILNLVYDIKPEL 418
           +E  +M  + KE VI  I  LV+D KP+L
Sbjct: 124 EESRRMDLVDKENVIPVIPRLVFDEKPDL 152


>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
           protein T07C4.10 protein.
          Length = 1013

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +2

Query: 332 DEMNKMVQIQKEAVIKDILNLVYDIKPEL 418
           +E  +M  + KE VI  I  LV+D KP+L
Sbjct: 124 EESRRMDLVDKENVIPVIPRLVFDEKPDL 152


>AL132948-23|CAC51049.1|  429|Caenorhabditis elegans Hypothetical
           protein Y39B6A.31 protein.
          Length = 429

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = -1

Query: 427 VDVEFRLDVIHQVEDVFDNSLFLDLHHFVHLINLHSGLGVDFRSDTFPCAHVLGF 263
           +D +F+  V+H VED+   S F+  +  +  I++      +    TF   H + F
Sbjct: 103 IDAKFKGAVLHIVEDIVKKSPFVKFYPQIGRIDVKPTQDGNVLEGTFNQRHAISF 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,867,520
Number of Sequences: 27780
Number of extensions: 124025
Number of successful extensions: 437
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)