Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C20
(529 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p pro... 32 0.42
AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB... 32 0.42
AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA... 32 0.42
BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p pro... 29 5.2
AY118426-1|AAM48455.1| 176|Drosophila melanogaster RH14320p pro... 29 5.2
AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-P... 29 5.2
AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-P... 29 5.2
AE013599-3225|AAF46731.2| 265|Drosophila melanogaster CG30283-P... 29 5.2
AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-P... 29 5.2
BT022816-1|AAY55232.1| 600|Drosophila melanogaster IP13170p pro... 28 6.8
AE014298-2821|AAF48938.1| 600|Drosophila melanogaster CG14196-P... 28 6.8
AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p pro... 28 9.0
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein. 28 9.0
AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA... 28 9.0
>AY119638-1|AAM50292.1| 494|Drosophila melanogaster RE43246p
protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.42
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Frame = -1
Query: 529 NDTSNGNVWYTGQRLNYNAEKPTAKA----KKSDAIRA-IYAI---VLKWPNVDL--LRL 380
NDT NGNVWYT Q+ N K T A D IY + + + NV L + +
Sbjct: 377 NDTINGNVWYTRQKEASNG-KITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDM 435
Query: 379 ADVTSYLHSGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKS---EYAWVLKFTL 215
L+ + +V MLG E + W + + I P K +YAW K T+
Sbjct: 436 GTGGDILNEQSTEVVMLGMEDTKIKWNADHNRLHIVFPPKNHIDKRGLDYAWTFKITI 493
>AE014296-1964|AAO41255.1| 494|Drosophila melanogaster CG6128-PB,
isoform B protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.42
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Frame = -1
Query: 529 NDTSNGNVWYTGQRLNYNAEKPTAKA----KKSDAIRA-IYAI---VLKWPNVDL--LRL 380
NDT NGNVWYT Q+ N K T A D IY + + + NV L + +
Sbjct: 377 NDTINGNVWYTRQKEASNG-KITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDM 435
Query: 379 ADVTSYLHSGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKS---EYAWVLKFTL 215
L+ + +V MLG E + W + + I P K +YAW K T+
Sbjct: 436 GTGGDILNEQSTEVVMLGMEDTKIKWNADHNRLHIVFPPKNHIDKRGLDYAWTFKITI 493
>AE014296-1963|AAF50054.2| 494|Drosophila melanogaster CG6128-PA,
isoform A protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.42
Identities = 36/118 (30%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Frame = -1
Query: 529 NDTSNGNVWYTGQRLNYNAEKPTAKA----KKSDAIRA-IYAI---VLKWPNVDL--LRL 380
NDT NGNVWYT Q+ N K T A D IY + + + NV L + +
Sbjct: 377 NDTINGNVWYTRQKEASNG-KITIYAFVLEYPYDTNELDIYPLGKDINIFRNVMLTGIDM 435
Query: 379 ADVTSYLHSGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKS---EYAWVLKFTL 215
L+ + +V MLG E + W + + I P K +YAW K T+
Sbjct: 436 GTGGDILNEQSTEVVMLGMEDTKIKWNADHNRLHIVFPPKNHIDKRGLDYAWTFKITI 493
>BT029142-1|ABJ17075.1| 1613|Drosophila melanogaster RE40504p
protein.
Length = 1613
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 355 SGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKSEYAWVLKFTLK*MRLTLTQPRV 179
SG+ V+ L N D T+ NG D K N +STK++Y + + L R +T+P++
Sbjct: 743 SGSPTVKYL-NSADLYTETL-NGRRDSKTSNSSSTKNDYYYDKENELYSQRRAVTKPKL 799
>AY118426-1|AAM48455.1| 176|Drosophila melanogaster RH14320p
protein.
Length = 176
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 484 NYNAEKPTAKAKKSDAIRAIYAIVLKWPN 398
NY AEKP K KK +A + LKW N
Sbjct: 60 NYYAEKPKKKPKKFNAANKHINLNLKWLN 88
>AE013599-3459|AAF46896.3| 1622|Drosophila melanogaster CG30092-PB,
isoform B protein.
Length = 1622
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 355 SGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKSEYAWVLKFTLK*MRLTLTQPRV 179
SG+ V+ L N D T+ NG D K N +STK++Y + + L R +T+P++
Sbjct: 752 SGSPTVKYL-NSADLYTETL-NGRRDSKTSNSSSTKNDYYYDKENELYSQRRAVTKPKL 808
>AE013599-3458|AAF46895.4| 2964|Drosophila melanogaster CG30092-PD,
isoform D protein.
Length = 2964
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 355 SGNYKVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKSEYAWVLKFTLK*MRLTLTQPRV 179
SG+ V+ L N D T+ NG D K N +STK++Y + + L R +T+P++
Sbjct: 752 SGSPTVKYL-NSADLYTETL-NGRRDSKTSNSSSTKNDYYYDKENELYSQRRAVTKPKL 808
>AE013599-3225|AAF46731.2| 265|Drosophila melanogaster CG30283-PA
protein.
Length = 265
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = -1
Query: 502 YTGQRLNYN---AEKPTAKAKKSDAIRAIYAIVLKWPNVDLLRLADVTSYLHSGNYKVEM 332
Y Q++N N AE A D+ + AIV + +V ++ VTS+ H+ K +
Sbjct: 186 YPHQQINRNHICAESANANTCNGDSGGPLTAIVT-YDHVQMVFQFGVTSFGHADCSKATV 244
Query: 331 LGNEGDYLDWTIVN 290
N +LDW IVN
Sbjct: 245 FTNVMTHLDW-IVN 257
>AE013599-1487|AAF58510.2| 246|Drosophila melanogaster CG13154-PA
protein.
Length = 246
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 484 NYNAEKPTAKAKKSDAIRAIYAIVLKWPN 398
NY AEKP K KK +A + LKW N
Sbjct: 130 NYYAEKPKKKPKKFNAANKHINLNLKWLN 158
>BT022816-1|AAY55232.1| 600|Drosophila melanogaster IP13170p
protein.
Length = 600
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 405 GQTLICCDSQTSLLICTVVTIKLRCWATKAITW 307
G+T++ C SL++C+ V I L C + I W
Sbjct: 489 GRTVVACTRSYSLILCSFVWIGL-CKGVRTIFW 520
>AE014298-2821|AAF48938.1| 600|Drosophila melanogaster CG14196-PA
protein.
Length = 600
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 405 GQTLICCDSQTSLLICTVVTIKLRCWATKAITW 307
G+T++ C SL++C+ V I L C + I W
Sbjct: 489 GRTVVACTRSYSLILCSFVWIGL-CKGVRTIFW 520
>AY071503-1|AAL49125.1| 627|Drosophila melanogaster RE55932p
protein.
Length = 627
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -2
Query: 510 TSGTRAKD*IITQRNRRQKRKNPTQLERFTQLFSNGQTLICCDSQTSLLICTVVTIKLR 334
T G +KD +R + +K + E + ++ S+G L+CCDS S+ T ++ L+
Sbjct: 13 TPGKASKD----KRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLK 67
>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
Length = 1518
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -2
Query: 510 TSGTRAKD*IITQRNRRQKRKNPTQLERFTQLFSNGQTLICCDSQTSLLICTVVTIKLR 334
T G +KD +R + +K + E + ++ S+G L+CCDS S+ T ++ L+
Sbjct: 16 TPGKASKD----KRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLK 70
>AE014296-3147|AAF49162.2| 892|Drosophila melanogaster CG9594-PA
protein.
Length = 892
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -2
Query: 510 TSGTRAKD*IITQRNRRQKRKNPTQLERFTQLFSNGQTLICCDSQTSLLICTVVTIKLR 334
T G +KD +R + +K + E + ++ S+G L+CCDS S+ T ++ L+
Sbjct: 13 TPGKASKD----KRPKTNAKKQKFRDEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLK 67
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,070,351
Number of Sequences: 53049
Number of extensions: 407912
Number of successful extensions: 1170
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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