Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C19
(424 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 161 2e-40
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 161 2e-40
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 159 6e-40
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 159 1e-39
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 159 1e-39
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 158 1e-39
03_01_0034 + 318432-318825,318902-319851 153 7e-38
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 150 4e-37
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 82 2e-16
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 75 2e-14
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 70 7e-13
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 70 9e-13
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 48 3e-06
08_02_0741 - 20618319-20618523,20618627-20618684,20618807-206191... 29 1.2
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578... 29 1.5
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 28 2.7
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 28 2.7
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 28 2.7
02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-41... 28 2.7
01_01_0560 + 4117203-4117458,4119359-4119609,4119691-4119860,412... 28 2.7
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 28 3.6
10_08_0243 - 16124790-16125361,16126358-16126547 27 4.7
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 27 4.7
06_03_1303 + 29180837-29181205,29181289-29181306,29181337-291816... 27 4.7
04_01_0349 - 4570071-4571267 27 4.7
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 27 6.2
08_01_0554 - 4851698-4851943,4852041-4852760 27 6.2
02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623 27 6.2
10_01_0300 - 3257584-3258825 27 8.2
09_04_0569 + 18600750-18602117 27 8.2
02_03_0265 + 17066253-17066501,17067102-17068121 27 8.2
01_01_0820 - 6395150-6395769,6395865-6396294 27 8.2
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 161 bits (392), Expect = 2e-40
Identities = 74/100 (74%), Positives = 85/100 (85%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEA------ 54
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
SGG+YVPRA+L+DLEP T+D+VRSG YGQ+F PDNFVFGQ
Sbjct: 55 SGGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ 94
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 161 bits (392), Expect = 2e-40
Identities = 71/101 (70%), Positives = 87/101 (86%)
Frame = +2
Query: 122 KMREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATA 301
KMREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASC--- 236
Query: 302 ESGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
G++VPRA+L+DLEP T+D+VR+G YGQ+F PDNFVFGQ
Sbjct: 237 ---GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ 274
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 159 bits (387), Expect = 6e-40
Identities = 72/100 (72%), Positives = 85/100 (85%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE+I +EHG+D TG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEA------ 54
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
SGG+YVPRA+L+DLEP T+D+VRSG +GQ+F PDNFVFGQ
Sbjct: 55 SGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 94
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 159 bits (385), Expect = 1e-39
Identities = 70/100 (70%), Positives = 85/100 (85%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE++ +EHGIDPTG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASC---- 56
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
G++VPRA+L+DLEP T+D+VR+G YGQ+F PDNFVFGQ
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ 94
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 159 bits (385), Expect = 1e-39
Identities = 70/100 (70%), Positives = 86/100 (86%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIG+KFWE++ +EHGIDPTG Y GTSDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASC---- 56
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
G++VPRA+L+DLEP T+D+VR+G YGQ+F PDNFVFGQ
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ 94
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 158 bits (384), Expect = 1e-39
Identities = 72/100 (72%), Positives = 85/100 (85%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE+I +EHGID TG Y G SDLQLERI+VYYNEA
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEA------ 54
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
SGG++VPRA+L+DLEP T+D+VRSG +GQ+F PDNFVFGQ
Sbjct: 55 SGGRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 94
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 153 bits (370), Expect = 7e-38
Identities = 69/100 (69%), Positives = 82/100 (82%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G SDLQLER++VYYNEAS
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASC---- 56
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
G++VPRA+L+DLEP T+D+VRSG YG +F PDNFVFGQ
Sbjct: 57 --GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQ 94
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 150 bits (364), Expect = 4e-37
Identities = 68/100 (68%), Positives = 82/100 (82%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+H+Q GQCGNQIGAKFWE+I EHG+DPTG Y GTS QLERI+VY+NEA
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEA------ 54
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
SGG++VPRA+L+DLEP T+D++RSG G +F PDNFVFGQ
Sbjct: 55 SGGRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQ 94
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 82.2 bits (194), Expect = 2e-16
Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 1/101 (0%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MREI+ + GQ G Q+G WE+ EHGI+P G SD + V ++ + +E
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTM--PSDTT---VGVAHDAFNTFFSE 55
Query: 305 SG-GKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
+G GK+VPRAI +DLEP +D VR+G Y QLF P+ + G+
Sbjct: 56 TGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGK 96
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 75.4 bits (177), Expect = 2e-14
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQL--ERISVYYNEASVAT 298
MRE + + GQ G Q+G WE+ EHGI P G G + + + +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGA-- 58
Query: 299 AESGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+
Sbjct: 59 ----GKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGK 96
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 70.1 bits (164), Expect = 7e-13
Identities = 39/100 (39%), Positives = 54/100 (54%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAE 304
MRE + + GQ G Q+G WE+ EHGI G + SD + +N T
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADG--QMPSDRTVGGGDDAFNTFFSETG- 57
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFVFGQ 424
GK+VPRA+ +DLEP +D VR+G Y QLF P+ + G+
Sbjct: 58 -AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGK 96
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 69.7 bits (163), Expect = 9e-13
Identities = 34/94 (36%), Positives = 55/94 (58%)
Frame = +2
Query: 128 REIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGVYRGTSDLQLERISVYYNEASVATAES 307
REI+ +Q GQCGNQIG +FW+ + EHGI G+ + +R V++ +A
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQA------D 56
Query: 308 GGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDN 409
Y+PRA+L+DLEP ++ +++ Y L+ +N
Sbjct: 57 DQHYIPRALLVDLEPRVINGIQNSEYRNLYNHEN 90
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 48.0 bits (109), Expect = 3e-06
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 305 SGGKYVPRAILLDLEPVTLDAVRSGGYGQLFLPDNFV 415
S GK+VPRA+ +DLEP +D V++G Y QLF P+ +
Sbjct: 117 SSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLI 153
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGIDPTGV 229
MREI+ + GQ G Q+G WE+ EHGI P G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>08_02_0741 -
20618319-20618523,20618627-20618684,20618807-20619164,
20619253-20619337,20619452-20619726,20619807-20620039,
20620371-20620398
Length = 413
Score = 29.5 bits (63), Expect = 1.2
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +3
Query: 159 AVTRLVQSSGR*YPKSTASTLPAFTGAQAIYNSRESPFIIMRPLLRRRRAVASTCPVPYS 338
AVT L Q+S P A+T + +A+ +R++ + R L +R+ V+S P P S
Sbjct: 300 AVTPLSQASPS-QPIPVATTNASAIMPRAVPQARKAS--LARFLEKRKERVSSVAPYPSS 356
Query: 339 STSNQ*PWTPSAPAATGNSSCQTTSSS 419
+ + T +P+ SSC + S
Sbjct: 357 KSPLESSDTIGSPSTPSKSSCTDITPS 383
>12_02_0017 -
12357029-12357070,12357434-12357503,12357722-12357852,
12358836-12358882,12359762-12360044,12360547-12362413,
12362454-12362665
Length = 883
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +3
Query: 300 RRAVASTCPVPYSSTSNQ*PWTPSAPA--ATGNSSCQTTSSS 419
RRA A P P+ + S + TP AP+ AT +SS +T SS
Sbjct: 55 RRAFAHPLPAPFPNLSGEPAPTPRAPSRHATPSSSPPSTPSS 96
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 28.3 bits (60), Expect = 2.7
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGI--DPTG--VYRGTSDLQLERISVYYNEASV 292
MRE V +Q G N +G+ FW E G+ DP V++ + L ++ V Y S
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD---VLYR--SG 54
Query: 293 ATAESGGKYVPRAILLD 343
T + Y PR + +D
Sbjct: 55 ETHQGVATYCPRLVSVD 71
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +3
Query: 261 ESPFIIMRPLLRRRRAVASTCPVPYSSTSNQ*PWTPSAPAATGNSSCQTTSSSV 422
E+ F+++ +LR+ + +S+ P + SNQ P T + PAA + + +++V
Sbjct: 66 ENSFLVI--MLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTV 117
>03_05_1091 + 30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 314 KYVPRAILLDLEPVTLDAVRSGGYGQLF 397
KY P L+DL+P+ + A+R+ Y L+
Sbjct: 1298 KYAPPTELIDLQPLPVTALRNARYESLY 1325
>02_01_0055 + 410661-411380,411481-413733,414486-414875,414983-418153
Length = 2177
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 314 KYVPRAILLDLEPVTLDAVRSGGYGQLF 397
KY P LLDL+P+ + A+R+ Y L+
Sbjct: 1329 KYAPPTELLDLQPLPVTALRNARYEGLY 1356
>01_01_0560 +
4117203-4117458,4119359-4119609,4119691-4119860,
4120188-4120385,4120922-4121081
Length = 344
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 252 NSRESPFIIMRPLLRRRRAVASTCPVPYSSTS 347
N+ +PF+ RPL+ R +S P P++S S
Sbjct: 187 NNASNPFVRQRPLVTRDGPESSVPPAPWASDS 218
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 27.9 bits (59), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 125 MREIVHLQAGQCGNQIGAKFWEIISEEHGI 214
MRE V +Q G N +G+ FW E G+
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGL 30
>10_08_0243 - 16124790-16125361,16126358-16126547
Length = 253
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 418 EDEVVWQEELPVAAGADGVQGHWFEVEEYGTG 323
E+E WQ E P +G +GHW V GTG
Sbjct: 30 EEERWWQAE-PGDDDDEGERGHWEGVSSSGTG 60
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 27.5 bits (58), Expect = 4.7
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 161 GNQIGAKFWEIISEEHG--IDPTGVYRGTSDLQLERIS 268
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>06_03_1303 +
29180837-29181205,29181289-29181306,29181337-29181622,
29185008-29186284,29186499-29187005
Length = 818
Score = 27.5 bits (58), Expect = 4.7
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 294 RRRRAVASTCPVPYSSTSNQ*PWTPSAPAATGNSSCQTTSS 416
R R+ V + P P S S + + P TG S+ TTSS
Sbjct: 521 RERKRVRAPSPSPSPSPSPSPSASATTPTQTGTSTTTTTSS 561
>04_01_0349 - 4570071-4571267
Length = 398
Score = 27.5 bits (58), Expect = 4.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 302 ESGGKYVPRAILLDLEPVTLDAVRSGGYGQLFL 400
+ GG++V R D+ PVTLD +R + ++ L
Sbjct: 150 DGGGRWVLRCSSGDVSPVTLDKMREVFFSEIVL 182
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 161 GNQIGAKFWEIISEEHG--IDPTGVYRGTSDLQLERIS 268
G+Q +KFW+ + EE G ++ + Y +D Q ER++
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 27.1 bits (57), Expect = 6.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1
Query: 415 DEVVWQEELPVAAGADGVQGH 353
D +V +E+PVAAGAD GH
Sbjct: 244 DVLVGAKEVPVAAGADSGGGH 264
>02_04_0264 - 21393029-21393046,21394249-21394814,21395005-21395623
Length = 400
Score = 27.1 bits (57), Expect = 6.2
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = -2
Query: 420 PKTKLSG--RKSCP*PPERTASRVTGSRSRSMARGTYL 313
P +LSG R+ PP TAS GS SRS AR + L
Sbjct: 27 PAAQLSGGVRRGGSSPPSATASGCKGSGSRSGARPSRL 64
>10_01_0300 - 3257584-3258825
Length = 413
Score = 26.6 bits (56), Expect = 8.2
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +2
Query: 161 GNQIGAKFWEIISEEHG--IDPTGVYRGTSDLQLERISVYYNEASVATA-ESGGKY 319
G+Q + FW+ + EE G ++ + Y +D Q ER++ + A A + GG +
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVNQILEDMLRACALDFGGSW 176
>09_04_0569 + 18600750-18602117
Length = 455
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 357 PWTPSAPAATGNSSCQTTSS 416
P +PSA +T +SSC TSS
Sbjct: 180 PVSPSASTSTSSSSCSATSS 199
>02_03_0265 + 17066253-17066501,17067102-17068121
Length = 422
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 372 RTASRVTGSRSRSMARGTYLPPLSAVATEASL 277
R ASR+ GS S + + PP+ A AT + L
Sbjct: 5 RAASRLLGSASAAFSAQAEAPPVIATATASEL 36
>01_01_0820 - 6395150-6395769,6395865-6396294
Length = 349
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 210 PCSSDIISQNFAPIWLPHCPAWR 142
PC D + PIWLP C WR
Sbjct: 108 PCPKDA-PRGVDPIWLPCCIDWR 129
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,832,660
Number of Sequences: 37544
Number of extensions: 204434
Number of successful extensions: 739
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 778540620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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