Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C17
         (592 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    26   0.79 
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   9.8  
DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.       23   9.8  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   9.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.8  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 26.2 bits (55), Expect = 0.79
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 341 AMVRGPWSARPWVVAP 388
           A++R PW  RPW+  P
Sbjct: 150 AVIRRPWIRRPWIRRP 165


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 5   WRRSKQWIPGCRIGTRIDFRCYWSNL*NIALFERHL 112
           W    Q +   +IG  +   CY     N+A FER L
Sbjct: 81  WCSEAQGLVAAQIGGVVFISCYAPPSLNLAEFERFL 116


>DQ974169-1|ABJ52809.1|  508|Anopheles gambiae serpin 11 protein.
          Length = 508

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -2

Query: 525 QDERSYQVLL*LKVDLHITLCSCVLPLFHTTC 430
           Q E  YQ    L  + H   C   LP++   C
Sbjct: 38  QSECDYQFATFLDANPHFVKCVASLPIYSDRC 69


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -2

Query: 84  YKFDQ*QRKSILVPILQPGIHCLER 10
           YK+++ +  +  +P+L PG+  + R
Sbjct: 490 YKYNELEANNFPLPLLLPGLEAVNR 514


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 357 PGPRGRGWSPLPDAAYYSGYRML*H 431
           PGP+G        A YY+G  ++ H
Sbjct: 784 PGPKGEPGRDCEAAPYYTGILLVRH 808


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,202
Number of Sequences: 2352
Number of extensions: 14622
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)