Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C17
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jag... 32 1.7
U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein. 32 1.7
U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jag... 32 1.7
BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille synd... 32 1.7
BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille synd... 32 1.7
BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille synd... 32 1.7
AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille synd... 32 1.7
AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein J... 32 1.7
AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein. 32 1.7
AK097004-1|BAC04925.1| 250|Homo sapiens protein ( Homo sapiens ... 31 4.0
>U77720-1|AAC51323.1| 1214|Homo sapiens transmembrane protein Jagged
protein.
Length = 1214
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1030 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1089
Query: 378 THGLAD 361
TH ++
Sbjct: 1090 THSASE 1095
>U73936-1|AAC52020.1| 1218|Homo sapiens Jagged 1 protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>U61276-1|AAB39007.1| 1218|Homo sapiens transmembrane protein Jagged 1
protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>BC126207-1|AAI26208.1| 1218|Homo sapiens jagged 1 (Alagille syndrome)
protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>BC126205-1|AAI26206.1| 1218|Homo sapiens jagged 1 (Alagille syndrome)
protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>BC098393-1|AAH98393.1| 1218|Homo sapiens jagged 1 (Alagille syndrome)
protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>AL035456-3|CAC07198.1| 1218|Homo sapiens jagged 1 (Alagille syndrome)
protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>AF028593-1|AAB84053.1| 1218|Homo sapiens transmembrane protein Jagged
1 protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>AF003837-1|AAC51731.1| 1218|Homo sapiens Jagged1 protein.
Length = 1218
Score = 31.9 bits (69), Expect = 1.7
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -2
Query: 555 NGNSSIKRYIQDERSYQVLL*LKVDLHITLCSCVLPLFHTTC-VKAFYIQNNRRRQAGAT 379
+GNSS+ + + R + L + D + L S VL + C V AFY +RR+ G+
Sbjct: 1043 DGNSSLIAAVAEVRVQRRPLKNRTDFLVPLLSSVLTVAWICCLVTAFYWCLRKRRKPGSH 1102
Query: 378 THGLAD 361
TH ++
Sbjct: 1103 THSASE 1108
>AK097004-1|BAC04925.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ39685 fis, clone SMINT2010369. ).
Length = 250
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Frame = +2
Query: 308 GSSNLQGTSSWAM--VRGPWSARPW 376
GSS TS W++ RGPW A PW
Sbjct: 78 GSSRDAHTSCWSLRRARGPWGAAPW 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,180,346
Number of Sequences: 237096
Number of extensions: 2025177
Number of successful extensions: 3517
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3515
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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