Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C17
         (592 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010044-1|AAQ22513.1|  780|Drosophila melanogaster LD31742p pro...    29   6.2  
AJ010150-1|CAB52415.1|  782|Drosophila melanogaster carnitine pa...    29   6.2  
AE013599-1111|AAF58786.1|  780|Drosophila melanogaster CG12891-P...    29   6.2  
AE013599-1110|AAF58785.2|  780|Drosophila melanogaster CG12891-P...    29   6.2  
BT022246-1|AAY54662.1|  103|Drosophila melanogaster IP04901p pro...    28   8.2  
AE014296-1528|AAN11998.1|  168|Drosophila melanogaster CG32024-P...    28   8.2  

>BT010044-1|AAQ22513.1|  780|Drosophila melanogaster LD31742p
           protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 9   GALNSGSPAAESARGLISAVTGQICKILHYL--KDIFYLVSS*IM*LPSSTVWWSVKGCF 182
           G  N   PA   +  LISA    I   LH+   +  F L +  ++ LPS+T+ W V  CF
Sbjct: 49  GVRNGVYPAHIQSLWLISA----IALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACF 104

Query: 183 LMMLRTTRNALCY--RSWIKIVLI 248
           L  L     ++C+  R  +K++L+
Sbjct: 105 LAAL-VVWLSICFTMRYTLKLLLM 127


>AJ010150-1|CAB52415.1|  782|Drosophila melanogaster carnitine
           palmitoyltransferase I protein.
          Length = 782

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 9   GALNSGSPAAESARGLISAVTGQICKILHYL--KDIFYLVSS*IM*LPSSTVWWSVKGCF 182
           G  N   PA   +  LISA    I   LH+   +  F L +  ++ LPS+T+ W V  CF
Sbjct: 49  GVRNGVYPAHIQSLWLISA----IALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACF 104

Query: 183 LMMLRTTRNALCY--RSWIKIVLI 248
           L  L     ++C+  R  +K++L+
Sbjct: 105 LAAL-VVWLSICFTMRYTLKLLLM 127


>AE013599-1111|AAF58786.1|  780|Drosophila melanogaster CG12891-PB,
           isoform B protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 9   GALNSGSPAAESARGLISAVTGQICKILHYL--KDIFYLVSS*IM*LPSSTVWWSVKGCF 182
           G  N   PA   +  LISA    I   LH+   +  F L +  ++ LPS+T+ W V  CF
Sbjct: 49  GVRNGVYPAHIQSLWLISA----IALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACF 104

Query: 183 LMMLRTTRNALCY--RSWIKIVLI 248
           L  L     ++C+  R  +K++L+
Sbjct: 105 LAAL-VVWLSICFTMRYTLKLLLM 127


>AE013599-1110|AAF58785.2|  780|Drosophila melanogaster CG12891-PA,
           isoform A protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
 Frame = +3

Query: 9   GALNSGSPAAESARGLISAVTGQICKILHYL--KDIFYLVSS*IM*LPSSTVWWSVKGCF 182
           G  N   PA   +  LISA    I   LH+   +  F L +  ++ LPS+T+ W V  CF
Sbjct: 49  GVRNGVYPAHIQSLWLISA----IALGLHFAGYQAPFNLTNRILVHLPSNTINWQVTACF 104

Query: 183 LMMLRTTRNALCY--RSWIKIVLI 248
           L  L     ++C+  R  +K++L+
Sbjct: 105 LAAL-VVWLSICFTMRYTLKLLLM 127


>BT022246-1|AAY54662.1|  103|Drosophila melanogaster IP04901p
           protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 101 ERHLLFSIFLNNVITVKYSLVEC 169
           +RHLLFS+FL   + VK+S  EC
Sbjct: 2   QRHLLFSVFLLATL-VKFSQAEC 23


>AE014296-1528|AAN11998.1|  168|Drosophila melanogaster CG32024-PA
           protein.
          Length = 168

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +2

Query: 101 ERHLLFSIFLNNVITVKYSLVEC 169
           +RHLLFS+FL   + VK+S  EC
Sbjct: 2   QRHLLFSVFLLATL-VKFSQAEC 23


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,360,129
Number of Sequences: 53049
Number of extensions: 603583
Number of successful extensions: 1199
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)