Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C16
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.1  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    23   2.1  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    23   2.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   6.5  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 496 VPQPKYGTTSTQQAMVGYLSNVPMQIYLVPQYYNGAQEQTAN 621
           +P   + +T TQ+    YL N+P   Y++  +  G+  Q  N
Sbjct: 418 IPVILWTSTLTQKE---YLENLPSDKYIIQIWTTGSDPQVRN 456


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 493 VVPQPKYGTTSTQQ-AMVGYLSNVPMQIYLVPQYYNGAQ 606
           V+   K G ++  +  +VG  + +P    L+ +Y+NG +
Sbjct: 148 VLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKE 186


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/39 (25%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +1

Query: 493 VVPQPKYGTTSTQQ-AMVGYLSNVPMQIYLVPQYYNGAQ 606
           V+   K G ++  +  +VG  + +P    L+ +Y+NG +
Sbjct: 148 VLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKE 186


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 448 HQYDVTEQPERQSSIVVPQPKYGTTSTQQAMVGYLS 555
           H Y+  +  ++ +    P P Y T ST Q     +S
Sbjct: 283 HVYNPPDHIQQATPYSAPGPTYSTWSTVQTPTTVMS 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.316    0.131    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,605
Number of Sequences: 336
Number of extensions: 2723
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)