Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C15
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 193 7e-50
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 193 7e-50
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 193 7e-50
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 193 7e-50
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 188 2e-48
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 188 2e-48
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 188 3e-48
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 188 3e-48
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 188 3e-48
Z81059-4|CAB02928.2| 228|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical pr... 31 0.82
U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical pr... 27 7.7
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 193 bits (471), Expect = 7e-50
Identities = 100/143 (69%), Positives = 111/143 (77%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVVNGKKTVSLRGIX------PCXIPWGQAGAEYVVES 348
VYLFQYDSTHGRFKGTV G ++ K+ S I P I WG +GA+YVVES
Sbjct: 44 VYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCL 525
TGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCL
Sbjct: 104 TGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/31 (70%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = +3
Query: 75 IGINGFGRIGRLVLRASIDK-GADVVAINDP 164
+GINGFGRIGRLVLRA+++K +VVA+NDP
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDP 36
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 193 bits (471), Expect = 7e-50
Identities = 100/143 (69%), Positives = 111/143 (77%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVVNGKKTVSLRGIX------PCXIPWGQAGAEYVVES 348
VYLFQYDSTHGRFKGTV G ++ K+ S I P I WG +GA+YVVES
Sbjct: 44 VYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCL 525
TGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCL
Sbjct: 104 TGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/31 (67%), Positives = 27/31 (87%), Gaps = 1/31 (3%)
Frame = +3
Query: 75 IGINGFGRIGRLVLRASIDK-GADVVAINDP 164
+GINGFGRIGRLVLRA+++K +V A+NDP
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVDAVNDP 36
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 193 bits (471), Expect = 7e-50
Identities = 100/143 (69%), Positives = 111/143 (77%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVVNGKKTVSLRGIX------PCXIPWGQAGAEYVVES 348
VYLFQYDSTHGRFKGTV G ++ K+ S I P I WG +GA+YVVES
Sbjct: 44 VYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCL 525
TGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCL
Sbjct: 104 TGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/31 (70%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = +3
Query: 75 IGINGFGRIGRLVLRASIDK-GADVVAINDP 164
+GINGFGRIGRLVLRA+++K +VVA+NDP
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDP 36
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 193 bits (471), Expect = 7e-50
Identities = 100/143 (69%), Positives = 111/143 (77%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVVNGKKTVSLRGIX------PCXIPWGQAGAEYVVES 348
VYLFQYDSTHGRFKGTV G ++ K+ S I P I WG +GA+YVVES
Sbjct: 44 VYLFQYDSTHGRFKGTVAHEGDYLLVAKEGKSQHKIKVYNSRDPAEIQWGASGADYVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYD-PSYKVISNASCTTNCL 525
TGVFTT +KA+AHL GGAKKVIISAPSADAPMFVVGVN E YD + +ISNASCTTNCL
Sbjct: 104 TGVFTTIEKANAHLKGGAKKVIISAPSADAPMFVVGVNHEKYDHANDHIISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/31 (70%), Positives = 28/31 (90%), Gaps = 1/31 (3%)
Frame = +3
Query: 75 IGINGFGRIGRLVLRASIDK-GADVVAINDP 164
+GINGFGRIGRLVLRA+++K +VVA+NDP
Sbjct: 6 VGINGFGRIGRLVLRAAVEKDSVNVVAVNDP 36
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 188 bits (459), Expect = 2e-48
Identities = 97/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVV---NGKKTVSLRGIX---PCXIPWGQAGAEYVVES 348
VYLF+YDSTHG+FKGTV +G ++ +GK + ++ P I WG A++VVES
Sbjct: 44 VYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCL 525
TGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISNASCTTNCL
Sbjct: 104 TGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPSLVL 176
+ +GINGFGRIGRLVLRA+++K VVA+NDP + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITI 40
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 188 bits (459), Expect = 2e-48
Identities = 97/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVV---NGKKTVSLRGIX---PCXIPWGQAGAEYVVES 348
VYLF+YDSTHG+FKGTV +G ++ +GK + ++ P I WG A++VVES
Sbjct: 44 VYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCL 525
TGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S VISNASCTTNCL
Sbjct: 104 TGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVISNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPSLVL 176
+ +GINGFGRIGRLVLRA+++K VVA+NDP + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITI 40
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 188 bits (458), Expect = 3e-48
Identities = 96/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVV---NGKKTVSLRGIX---PCXIPWGQAGAEYVVES 348
VYLF+YDSTHG+FKGTV +G ++ +GK + ++ P I WG A++VVES
Sbjct: 44 VYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCL 525
TGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCL
Sbjct: 104 TGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPSLVL 176
+ +GINGFGRIGRLVLRA+++K VVA+NDP + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITI 40
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 188 bits (458), Expect = 3e-48
Identities = 96/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVV---NGKKTVSLRGIX---PCXIPWGQAGAEYVVES 348
VYLF+YDSTHG+FKGTV +G ++ +GK + ++ P I WG A++VVES
Sbjct: 44 VYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCL 525
TGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCL
Sbjct: 104 TGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPSLVL 176
+ +GINGFGRIGRLVLRA+++K VVA+NDP + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITI 40
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 188 bits (458), Expect = 3e-48
Identities = 96/143 (67%), Positives = 112/143 (78%), Gaps = 7/143 (4%)
Frame = +1
Query: 187 VYLFQYDSTHGRFKGTVRPNGHLVV---NGKKTVSLRGIX---PCXIPWGQAGAEYVVES 348
VYLF+YDSTHG+FKGTV +G ++ +GK + ++ P I WG A++VVES
Sbjct: 44 VYLFKYDSTHGQFKGTVTYDGDFLIVQKDGKSSHKIKVFNSKDPAAIAWGSVKADFVVES 103
Query: 349 TGVFTTTDKASAHLVGGAKKVIISAPSADAPMFVVGVNLEAYDPSY-KVISNASCTTNCL 525
TGVFTT +KASAHL GGAKKVIISAPSADAPM+VVGVN E YD S V+SNASCTTNCL
Sbjct: 104 TGVFTTKEKASAHLQGGAKKVIISAPSADAPMYVVGVNHEKYDASNDHVVSNASCTTNCL 163
Query: 526 APLAKVIHDNFELIEGLMTTVHA 594
APLAKVI+DNF +IEGLMTTVHA
Sbjct: 164 APLAKVINDNFGIIEGLMTTVHA 186
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/37 (59%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 69 SKIGINGFGRIGRLVLRASIDKG-ADVVAINDPSLVL 176
+ +GINGFGRIGRLVLRA+++K VVA+NDP + +
Sbjct: 4 ANVGINGFGRIGRLVLRAAVEKDTVQVVAVNDPFITI 40
>Z81059-4|CAB02928.2| 228|Caenorhabditis elegans Hypothetical
protein F11F1.6 protein.
Length = 228
Score = 30.7 bits (66), Expect = 0.82
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 220 RFKGTVRPNGHLVVNGKKTVSLRGIXPCXIPWGQAGAEYVVESTGVFTTTDK 375
RFKG V NG +V +G + + + C I Q A +E G F T+K
Sbjct: 114 RFKGCVDANGDIVKSGFFVIGNKSLKYCRIQANQLQAR--IEPKGCFNGTEK 163
>Z81057-5|CAB02917.2| 846|Caenorhabditis elegans Hypothetical
protein F10D11.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -1
Query: 319 DPMEXSMXGSLSETQFSFRLRRGVHSASRYP*NDRESNHTGK--GRPXVV-KTNEGSLIA 149
D E L++ + +RLRRGVHS + + + R S H P +V TNE + +
Sbjct: 562 DEEEARRRRRLAKEKAKYRLRRGVHSNATFVMSIRPSRHVASHTSSPAIVAATNETTKLR 621
Query: 148 T 146
T
Sbjct: 622 T 622
>U40059-1|AAA81138.3| 867|Caenorhabditis elegans Hypothetical
protein K03C7.1 protein.
Length = 867
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = +1
Query: 268 KKTVSLRGIXPCXIPWGQAGAEYVVESTGVFTTTDKASAHLVGGAKKVIISA 423
KK L P IPW Q A E G F + A+ + G K ++ A
Sbjct: 627 KKPRELEVYIPFVIPWEQTAALITQEGMGAFGKSRAANVEVNFGDKPIVQGA 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,323,935
Number of Sequences: 27780
Number of extensions: 303892
Number of successful extensions: 845
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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