Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C14
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.8  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.5  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 368 TLGEKLSDDEVEQLLQGQEDSQRNI 442
           +LG KL  D+V  L + +E  ++NI
Sbjct: 190 SLGIKLRYDDVNNLFRIEESEEKNI 214


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 368 TLGEKLSDDEVEQLLQGQEDSQRNI 442
           +LG KL  D+V  L + +E  ++NI
Sbjct: 190 SLGIKLRYDDVNNLFRIEESEEKNI 214


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 194 LHLKPDERISFEVFLPIYQAISKARSGDTANDFI 295
           LHL   + +SF + LP  Q +  AR G    D I
Sbjct: 250 LHLHLTDAVSFPIVLPKVQEL--ARFGAYGPDMI 281


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +2

Query: 140 ALRALGQNPTESDVKKFT 193
           A++ L ++PT  ++++FT
Sbjct: 481 AVKMLKESPTSEEIRQFT 498


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 3/20 (15%)
 Frame = -3

Query: 440 YFVGSLPG---LEAVVPPHH 390
           YF   L G   +E V+PPHH
Sbjct: 110 YFWKMLTGFGKIEQVLPPHH 129


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
          castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 80 PPEIQPVDLQNIQP*LN 30
          PPE  P+  +NI+  LN
Sbjct: 34 PPEDTPLSFKNIESHLN 50


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 368 WRADVAVLQRR 336
           WRA +AVL+RR
Sbjct: 537 WRAFLAVLKRR 547


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,678
Number of Sequences: 336
Number of extensions: 2670
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)