Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C12
         (595 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79234-1|CAA55816.1|  178|Homo sapiens ribosomal protein L11 pro...    42   0.002
L05092-1|AAC15856.1|  178|Homo sapiens ribosomal protein L11 pro...    42   0.002
BC018970-1|AAH18970.1|  177|Homo sapiens ribosomal protein L11 p...    42   0.002
AY871274-1|AAX11430.1|  177|Homo sapiens cell growth-inhibiting ...    42   0.002
AL451000-5|CAH71474.1|  174|Homo sapiens ribosomal protein L11 p...    42   0.002
AL451000-4|CAH71473.1|  131|Homo sapiens ribosomal protein L11 p...    42   0.002
AL451000-3|CAH71472.1|  178|Homo sapiens ribosomal protein L11 p...    42   0.002
AF432212-1|AAL99919.1|  176|Homo sapiens CLL-associated antigen ...    42   0.002
AF101385-1|AAD20460.3|  177|Homo sapiens ribosomal protein L11 p...    42   0.002
AB007171-1|BAA25831.1|   36|Homo sapiens ribosomal protein L11 p...    34   0.33 

>X79234-1|CAA55816.1|  178|Homo sapiens ribosomal protein L11
           protein.
          Length = 178

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 9   ENPMRELRIRKLCLNICVGESG 30


>L05092-1|AAC15856.1|  178|Homo sapiens ribosomal protein L11
           protein.
          Length = 178

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 9   ENPMRELRIRKLCLNICVGESG 30


>BC018970-1|AAH18970.1|  177|Homo sapiens ribosomal protein L11
           protein.
          Length = 177

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 8   ENPMRELRIRKLCLNICVGESG 29


>AY871274-1|AAX11430.1|  177|Homo sapiens cell growth-inhibiting
           protein 34 protein.
          Length = 177

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 8   ENPMRELRIRKLCLNICVGESG 29


>AL451000-5|CAH71474.1|  174|Homo sapiens ribosomal protein L11
           protein.
          Length = 174

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 7   ENPMRELRIRKLCLNICVGESG 28


>AL451000-4|CAH71473.1|  131|Homo sapiens ribosomal protein L11
           protein.
          Length = 131

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 7   ENPMRELRIRKLCLNICVGESG 28


>AL451000-3|CAH71472.1|  178|Homo sapiens ribosomal protein L11
           protein.
          Length = 178

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 9   ENPMRELRIRKLCLNICVGESG 30


>AF432212-1|AAL99919.1|  176|Homo sapiens CLL-associated antigen
           KW-12 protein.
          Length = 176

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 7   ENPMRELRIRKLCLNICVGESG 28


>AF101385-1|AAD20460.3|  177|Homo sapiens ribosomal protein L11
           protein.
          Length = 177

 Score = 41.9 bits (94), Expect = 0.002
 Identities = 18/22 (81%), Positives = 19/22 (86%)
 Frame = +2

Query: 530 KNVMRNLHIRKLCLNICVGESG 595
           +N MR L IRKLCLNICVGESG
Sbjct: 8   ENPMRELRIRKLCLNICVGESG 29


>AB007171-1|BAA25831.1|   36|Homo sapiens ribosomal protein L11
           protein.
          Length = 36

 Score = 34.3 bits (75), Expect = 0.33
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +2

Query: 554 IRKLCLNICVGESG 595
           IRKLCLNICVGESG
Sbjct: 1   IRKLCLNICVGESG 14


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,098,413
Number of Sequences: 237096
Number of extensions: 1224053
Number of successful extensions: 2344
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2344
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)