Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C11
(541 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38; Eukaryo... 313 2e-84
UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform; n=... 312 3e-84
UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein... 205 9e-77
UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55; Eukar... 281 6e-75
UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2; E... 244 8e-64
UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S riboso... 234 1e-60
UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S riboso... 134 3e-60
UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillard... 232 4e-60
UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n... 223 2e-57
UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9; Eukaryot... 200 2e-50
UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing ... 192 4e-48
UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1; Encephal... 159 3e-38
UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1; Methano... 111 7e-24
UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2; Methanobact... 109 4e-23
UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12; Euryar... 108 7e-23
UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4; Pyrobac... 107 1e-22
UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1; Th... 106 4e-22
UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4; Desulfu... 104 2e-21
UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga ... 101 1e-20
UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2; Euryarc... 98 1e-19
UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4; Euryarc... 97 2e-19
UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2; Bigelowi... 93 4e-18
UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3; Thermop... 93 4e-18
UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1; Nanoarc... 91 1e-17
UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3; Me... 91 1e-17
UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1; Methanococc... 91 2e-17
UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmenta... 89 5e-17
UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5; Sulfolo... 85 7e-16
UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_030011... 82 7e-15
UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1; Me... 78 1e-13
UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6; Halobac... 74 2e-12
UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1; Picroph... 73 3e-12
UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2; Thermoprote... 71 1e-11
UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 58 1e-07
UniRef50_Q6Y3G3 Cluster: RecA; n=2; Desulfuromonadales|Rep: RecA... 42 0.009
UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108, w... 40 0.028
UniRef50_Q3WHX0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.0
UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n... 34 1.8
UniRef50_Q9AAE0 Cluster: ISCc2, transposase, fusion; n=1; Caulob... 34 1.8
UniRef50_A3BE82 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family prote... 34 2.4
UniRef50_Q4T5C4 Cluster: Chromosome undetermined SCAF9327, whole... 33 3.2
UniRef50_Q8S3P7 Cluster: Putative uncharacterized protein 24K23.... 33 4.2
UniRef50_Q6P3E2 Cluster: Immediate early response 5-like; n=2; E... 33 4.2
UniRef50_UPI0000D9F43D Cluster: PREDICTED: hypothetical protein;... 33 5.6
UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to Tyrosine-p... 33 5.6
UniRef50_UPI000023E164 Cluster: hypothetical protein FG03308.1; ... 33 5.6
UniRef50_Q03C76 Cluster: Predicted membrane protein; n=1; Lactob... 33 5.6
UniRef50_A5ZHX4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A5NUY4 Cluster: Phosphoribosylformylglycinamidine synth... 33 5.6
UniRef50_A0VDJ9 Cluster: PE-PGRS family protein; n=1; Delftia ac... 33 5.6
UniRef50_A0A7M3 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q0U2Z5 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1; Acantha... 33 5.6
UniRef50_UPI0000E212EB Cluster: PREDICTED: hypothetical protein;... 32 7.3
UniRef50_UPI00003832B5 Cluster: hypothetical protein Magn0300458... 32 7.3
UniRef50_Q81VL9 Cluster: Lipoprotein, putative; n=9; Bacillus ce... 32 7.3
UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q1NH40 Cluster: TonB-dependent receptor; n=1; Sphingomo... 32 7.3
UniRef50_Q095T8 Cluster: Radical SAM:Molybdenum cofactor synthes... 32 7.3
UniRef50_Q381Q5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q5T953 Cluster: Immediate early response 5-like protein... 32 7.3
UniRef50_Q2HBS5 Cluster: Putative uncharacterized protein; n=1; ... 32 7.3
UniRef50_Q05223 Cluster: Major head protein Gp17; n=5; Siphoviri... 32 7.3
UniRef50_Q59046 Cluster: DNA topoisomerase 1; n=6; Methanococcal... 32 7.3
UniRef50_Q95108 Cluster: Thioredoxin, mitochondrial precursor; n... 32 7.3
UniRef50_UPI000155BD16 Cluster: PREDICTED: similar to Bone morph... 32 9.7
UniRef50_P49450-2 Cluster: Isoform 2 of P49450 ; n=5; Eutheria|R... 32 9.7
UniRef50_Q88TN6 Cluster: Integral membrane protein; n=1; Lactoba... 32 9.7
UniRef50_Q7NUT1 Cluster: Invasion protein; n=1; Chromobacterium ... 32 9.7
UniRef50_Q3JN86 Cluster: Putative uncharacterized protein; n=2; ... 32 9.7
UniRef50_Q3VZN6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_A5NLZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 32 9.7
UniRef50_Q7XYP8 Cluster: Peptide deformylase; n=1; Bigelowiella ... 32 9.7
UniRef50_Q7SD09 Cluster: Putative uncharacterized protein NCU081... 32 9.7
UniRef50_A6S3K5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_Q5SW25 Cluster: POM121-like protein 2; n=3; Murinae|Rep... 32 9.7
UniRef50_Q8N8D1 Cluster: Programmed cell death protein 7; n=13; ... 32 9.7
UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precurs... 32 9.7
UniRef50_P49450 Cluster: Histone H3-like centromeric protein A; ... 32 9.7
UniRef50_Q9AAL4 Cluster: N-succinylarginine dihydrolase 1; n=9; ... 32 9.7
>UniRef50_P41042 Cluster: 40S ribosomal protein S4; n=38;
Eukaryota|Rep: 40S ribosomal protein S4 - Drosophila
melanogaster (Fruit fly)
Length = 261
Score = 313 bits (768), Expect = 2e-84
Identities = 141/178 (79%), Positives = 159/178 (89%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 6 KKHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIV 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
QRL+KVDGKVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCK
Sbjct: 66 MQRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
V++ G K VP+LVTHDGRT+RYPDPLI NDSVQ+DI++ KI D+IKFDSGNLCMI
Sbjct: 126 VKKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSGNLCMI 183
>UniRef50_P62701 Cluster: 40S ribosomal protein S4, X isoform;
n=137; Eukaryota|Rep: 40S ribosomal protein S4, X
isoform - Homo sapiens (Human)
Length = 263
Score = 312 bits (766), Expect = 3e-84
Identities = 138/178 (77%), Positives = 158/178 (88%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCK
Sbjct: 66 MQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
VR++ G K +P+LVTHD RT+RYPDPLIKVND++Q+D+ T KI DFIKFD+GNLCM+
Sbjct: 126 VRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMV 183
>UniRef50_UPI000065EA48 Cluster: similar to 40S ribosomal protein
S4, X isoform (LOC126235), mRNA; n=1; Takifugu
rubripes|Rep: similar to 40S ribosomal protein S4, X
isoform (LOC126235), mRNA - Takifugu rubripes
Length = 291
Score = 205 bits (500), Expect(2) = 9e-77
Identities = 94/115 (81%), Positives = 103/115 (89%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 KKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIC 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAK 350
QR IK+DGKVRTD TYP GFMDV+SI+KT E FRLIYDVKGRFT+HRIT EEAK
Sbjct: 66 MQRFIKIDGKVRTDITYPTGFMDVISIDKTGEHFRLIYDVKGRFTVHRITAEEAK 120
Score = 104 bits (250), Expect(2) = 9e-77
Identities = 41/64 (64%), Positives = 55/64 (85%)
Frame = +3
Query: 348 KYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGN 527
+YKLCKV+++ G K +P+LVTHD RT+RYPDPLIKVND+V++D+ T KI DFIKFD+ N
Sbjct: 152 QYKLCKVKKILIGTKGIPHLVTHDARTIRYPDPLIKVNDTVRIDLDTGKITDFIKFDTSN 211
Query: 528 LCMI 539
+CM+
Sbjct: 212 MCMV 215
>UniRef50_P49204 Cluster: 40S ribosomal protein S4-2; n=55;
Eukaryota|Rep: 40S ribosomal protein S4-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 262
Score = 281 bits (690), Expect = 6e-75
Identities = 126/178 (70%), Positives = 150/178 (84%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KHLKRLNAPK WMLDKLGG +AP+PS+GPHK RECLPLV+ +RNRLKYALT EV+ I+
Sbjct: 6 KKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISIL 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
QR I+VDGKVRTD TYPAGFMDVVSI KTNE FRL+YD KGRF +H I EEAK+KLCK
Sbjct: 66 MQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
VR + G K +PYL T+DGRT+RYPDPLIK ND+++LD+ NKI++FIKFD GN+ M+
Sbjct: 126 VRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMV 183
>UniRef50_UPI0000499069 Cluster: 40S ribosomal protein S4; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S4 - Entamoeba histolytica HM-1:IMSS
Length = 326
Score = 244 bits (598), Expect = 8e-64
Identities = 105/178 (58%), Positives = 137/178 (76%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
R HLKRLNAP WML KLGG +AP+PS GPH ++ECLPL++ LRNRL YAL G EV IV
Sbjct: 6 RHHLKRLNAPHHWMLSKLGGTFAPKPSHGPHGMKECLPLILILRNRLNYALNGREVTMIV 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
K R IK+DGK+RTD YP GFMDV+SI +T E FRL+Y+ K RF + +T E+AK+KLCK
Sbjct: 66 KNRTIKIDGKIRTDTRYPVGFMDVLSIPRTKENFRLMYNTKRRFCLVPLTAEQAKFKLCK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
+ + G ++PY+VTHDGRT+RYP P ++ ND+++L++ T KI+DF+KFD GN M+
Sbjct: 126 IEKRVLGTGAIPYIVTHDGRTIRYPHPELQANDTIKLNLETGKIVDFVKFDIGNTAMM 183
>UniRef50_UPI0000D9EB72 Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=1; Macaca mulatta|Rep:
PREDICTED: similar to 40S ribosomal protein S4, X
isoform - Macaca mulatta
Length = 244
Score = 234 bits (572), Expect = 1e-60
Identities = 111/178 (62%), Positives = 137/178 (76%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
++HLKR+ A + WMLDKL GV+A RPSTGPHKLRECLP IFLRNRLKYALTG+EV KI
Sbjct: 17 KQHLKRVAALQHWMLDKLTGVFAARPSTGPHKLRECLPH-IFLRNRLKYALTGDEVKKIC 75
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
Q IKVDGK+RTD P MDV+SI+K E F LIY + RF +HRITPEE KYKLCK
Sbjct: 76 MQWFIKVDGKIRTDNNLPYWIMDVISIDKMGEDFCLIYGINRRFALHRITPEEVKYKLCK 135
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
+R++ K +P+LV HD T+R+PD LIKVND++Q+D+ T KI +KFD+GNLC++
Sbjct: 136 MRKIFVRAKGIPHLVIHDIHTVRHPDSLIKVNDTIQIDLETGKI-TALKFDTGNLCLV 192
>UniRef50_UPI00005A08FF Cluster: PREDICTED: similar to 40S ribosomal
protein S4, X isoform; n=3; Eutheria|Rep: PREDICTED:
similar to 40S ribosomal protein S4, X isoform - Canis
familiaris
Length = 240
Score = 134 bits (323), Expect(2) = 3e-60
Identities = 55/80 (68%), Positives = 68/80 (85%)
Frame = +3
Query: 300 DVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLD 479
D KGRF +HRITPEEAKYKL KVR++ G K +P+LVTHD RT+RYPDPLIK+ND++Q+D
Sbjct: 76 DTKGRFAVHRITPEEAKYKLGKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKMNDTIQID 135
Query: 480 ISTNKIMDFIKFDSGNLCMI 539
+ T KI DF KFD+GNLCM+
Sbjct: 136 LETGKITDFFKFDTGNLCMV 155
Score = 120 bits (290), Expect(2) = 3e-60
Identities = 55/70 (78%), Positives = 60/70 (85%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
RKHLK + APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 6 RKHLKHVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKIR 65
Query: 186 KQRLIKVDGK 215
Q IK+DGK
Sbjct: 66 MQHFIKMDGK 75
>UniRef50_Q9XG32 Cluster: 40S ribosomal protein S4; n=1; Guillardia
theta|Rep: 40S ribosomal protein S4 - Guillardia theta
(Cryptomonas phi)
Length = 257
Score = 232 bits (567), Expect = 4e-60
Identities = 102/178 (57%), Positives = 138/178 (77%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KH KRLNAPK W+L+KLGG++APR S+GPHK + +PLVI +RN+LKY+ E L I+
Sbjct: 6 KKHYKRLNAPKKWLLNKLGGIWAPRSSSGPHKKQNSIPLVIVIRNKLKYSTNQRESLNIL 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
K+ I VDGKVR D +PAG MDV+SI+ T E +R++YD G F +HRIT +E+ +KLCK
Sbjct: 66 KKNEIYVDGKVRADKNFPAGVMDVISIKTTKENYRVLYDNVGHFFLHRITIKESMFKLCK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
V RV+ G K +PY+VTHDGRT+R+P+ LIK NDS+ LD+ NK++DFIKF G+LC++
Sbjct: 126 VIRVSIGSKGIPYIVTHDGRTIRFPNLLIKSNDSIVLDLLNNKVIDFIKFSIGSLCVV 183
>UniRef50_A2ECC6 Cluster: 40S ribosomal protein S4-C, putative; n=4;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein
S4-C, putative - Trichomonas vaginalis G3
Length = 269
Score = 223 bits (545), Expect = 2e-57
Identities = 99/178 (55%), Positives = 132/178 (74%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
R HLKRL AP W+L K G +A PSTGPHKLRECLP+ IFLR+RLKYALT E + IV
Sbjct: 20 RFHLKRLTAPHHWLLAKSAGKFASHPSTGPHKLRECLPINIFLRDRLKYALTAKEAVAIV 79
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
K+RL+KVDGKVRT+ YP G MDV+ + K+NELFR+IYD KGRF +H I +EA +KL +
Sbjct: 80 KRRLVKVDGKVRTNYRYPTGLMDVIELGKSNELFRIIYDCKGRFCVHHIEAKEASFKLLR 139
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
V + G K +P++VTHDGRT+ Y DP ++V+D+++ +I T ++ IKF G++ M+
Sbjct: 140 VNQFKIGAKGIPHVVTHDGRTISYVDPSVRVHDALKFNIKTGEVESVIKFKVGDVAMV 197
>UniRef50_Q7KJQ3 Cluster: 40S ribosomal protein S4; n=9;
Eukaryota|Rep: 40S ribosomal protein S4 - Leishmania
major
Length = 273
Score = 200 bits (487), Expect = 2e-50
Identities = 94/178 (52%), Positives = 118/178 (66%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KHLKRL APK WML KL GV+APRP GPHKLRECLPL++ +RNRLKYAL E I+
Sbjct: 3 KKHLKRLYAPKDWMLSKLTGVFAPRPRPGPHKLRECLPLLVIIRNRLKYALNAREGEMIL 62
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
+Q L+ VD R D YPAGFMDVV I KT + FRL+YDVKGRF + ++ EA+ KL K
Sbjct: 63 RQGLVHVDNHPRRDGKYPAGFMDVVEIPKTGDRFRLMYDVKGRFALVNLSEAEAQIKLMK 122
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
V + T VP VTHDG +RYPDP + D++ ++ K +D IK G ++
Sbjct: 123 VVNLYTATGRVPVAVTHDGHRIRYPDPHTSIGDTIVYNVKEKKCVDLIKNRQGKAVIV 180
>UniRef50_UPI00006CBCC9 Cluster: Ribosomal family S4e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal family S4e containing protein - Tetrahymena
thermophila SB210
Length = 370
Score = 192 bits (468), Expect = 4e-48
Identities = 101/209 (48%), Positives = 133/209 (63%), Gaps = 31/209 (14%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLD-------------------------KLGGVY----APRPSTGPH 98
+KHLKR+NAPK+WML+ KL +Y A RPS GPH
Sbjct: 87 KKHLKRINAPKSWMLNKLGGIWVITFFAFRLRKNDFITTIPKLKFIYFKKQATRPSQGPH 146
Query: 99 KLRECLPLVIFLRNRLKYALTGNEVLKIV--KQRLIKVDGKVRTDPTYPAGFMDVVSIEK 272
KLRE LPL + L+ RL YAL G +V I+ K++ + VDGKVR D YP G MDVV IEK
Sbjct: 147 KLRESLPLSVLLKERLNYALNGRDVTLILNDKEQNVFVDGKVRRDKGYPTGLMDVVRIEK 206
Query: 273 TNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVTHDGRTLRYPDPLI 452
T++ FR++YD KGRF + ++ EEAKYKL KV A GP +PY+VTHD RT+R+P+P I
Sbjct: 207 TDQSFRILYDTKGRFVLKSLSKEEAKYKLLKVTAKAIGPNQIPYIVTHDSRTIRFPNPEI 266
Query: 453 KVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
K+ D+++ D+ NKI +F +SGN+C I
Sbjct: 267 KIGDTLKYDLVNNKIENFAHLESGNVCYI 295
>UniRef50_Q8SRB9 Cluster: 40S RIBOSOMAL PROTEIN S4; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S4 -
Encephalitozoon cuniculi
Length = 268
Score = 159 bits (387), Expect = 3e-38
Identities = 74/168 (44%), Positives = 114/168 (67%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
R HLKR APK+WMLDK GG +A P++GPHK EC+PL + L+YA E+ I+
Sbjct: 6 RDHLKRKTAPKSWMLDKQGGTFALMPASGPHKKTECIPLGYLISRFLRYASNFKELSIIL 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
++ IKV+G+VRT+ +P G DVVSIEKT E FR++Y+V +F +HRI+ EEA Y+L K
Sbjct: 66 AEKNIKVNGRVRTNSHFPVGLFDVVSIEKTGEHFRVLYNVHKKFHLHRISSEEASYRLTK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFI 509
V + + +PY+V+ G ++R+ DP I + ++++ T+K++++I
Sbjct: 126 VTKKYEN-QGIPYIVSSCGLSIRFCDPAIDLGYTIKISNETSKVIEYI 172
>UniRef50_Q8TW18 Cluster: 30S ribosomal protein S4e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S4e -
Methanopyrus kandleri
Length = 260
Score = 111 bits (268), Expect = 7e-24
Identities = 65/188 (34%), Positives = 103/188 (54%), Gaps = 15/188 (7%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 182
++H+KRL AP AW + K GG +APRP GPH + +PL+I +R+ L YA E KI
Sbjct: 9 KRHVKRLAAPYAWPIPRKEGGKFAPRPYPGPHTMDTSVPLLILVRDMLGYADYAREARKI 68
Query: 183 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 362
+ + I VDG VR +P +P G MDVV I +T + +R++ + R + I+ EEA+ K+C
Sbjct: 69 ITRGEIYVDGVVRKEPKFPVGIMDVVEIPRTGDRYRVVMNEHHRLDVVPISEEEARVKVC 128
Query: 363 KVRRVATGPKSVPYLVTHDGRT--LRYPDP------LIKVNDSVQLDI------STNKIM 500
+++ + HDG+ + DP + V DS+ L++ + K++
Sbjct: 129 RIKNKTYVRGGNLQITMHDGKNWLVEIEDPTDPKEDVYSVGDSLVLELPEPDSGESWKVV 188
Query: 501 DFIKFDSG 524
D I F+ G
Sbjct: 189 DHIPFEEG 196
>UniRef50_A5UL76 Cluster: Ribosomal protein S4e; n=2;
Methanobacteriaceae|Rep: Ribosomal protein S4e -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 242
Score = 109 bits (262), Expect = 4e-23
Identities = 57/179 (31%), Positives = 92/179 (51%)
Frame = +3
Query: 3 TRKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 182
+RKHLK APK W + + +PS G H + L L + +R+ LK A E +I
Sbjct: 6 SRKHLKTYKAPKTWPIHPKEDTWTVKPSAGSHSIENSLSLTLVIRDILKLADNSREAKRI 65
Query: 183 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 362
+ + VDG+V D +P GFMD++ I KT E++R++ D KGR +++I EE KLC
Sbjct: 66 INSGNVLVDGRVIKDYKFPVGFMDIIEIPKTGEVYRVLLDKKGRLQLNKI--EENDSKLC 123
Query: 363 KVRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
K+ +T + HDG+ + + V D + L + ++I + + G +I
Sbjct: 124 KIVNKSTIKGGKIQVNLHDGKNVIIDENDYNVGDVIDLKVPDHEINEVFELKEGACVLI 182
>UniRef50_P62428 Cluster: 30S ribosomal protein S4e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanococcus maripaludis
Length = 244
Score = 108 bits (260), Expect = 7e-23
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 8/186 (4%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
RKHLKRL AP W L + + RPS GPH + + LPL++ +R+ LKYA E KI+
Sbjct: 7 RKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKII 66
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
+ I +DG R + +PAG MDV+SI + +E + +++D GR ++ + ++ KLCK
Sbjct: 67 QTGKILIDGLKRKEYKHPAGLMDVLSIPEMDETYLVLFDESGRISLKK--TDKTDVKLCK 124
Query: 366 VRRVATGPKSVPYLVTHDGR--------TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDS 521
+ L HDGR + + + K DSV + I I + F
Sbjct: 125 IVNKTVVKGGNIQLNLHDGRNQIVKVSDAAKAEEDVYKTGDSVLISIPEQSIAGHVAFGE 184
Query: 522 GNLCMI 539
G L I
Sbjct: 185 GKLAYI 190
>UniRef50_Q8ZTD3 Cluster: 30S ribosomal protein S4e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S4e - Pyrobaculum
aerophilum
Length = 238
Score = 107 bits (258), Expect = 1e-22
Identities = 67/175 (38%), Positives = 88/175 (50%), Gaps = 4/175 (2%)
Frame = +3
Query: 12 HLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 188
HL+R AP W + K GGV+ RPS GPH L LPL + +R+ LKYA T +E I+
Sbjct: 3 HLRRTLAPAWWPIPRKKGGVWVVRPSPGPHSLAYSLPLALIIRDVLKYAKTMHEARYIIS 62
Query: 189 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 368
+ +KVDG VR D +P G MDV+ I T E++R++ D + + I+ EEA KL +V
Sbjct: 63 RGYVKVDGVVRRDYKFPVGLMDVIEIVPTGEVYRVVPDADKYYNLLPISTEEAALKLLRV 122
Query: 369 RRVATGPKSVPYLVTHDGR---TLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSG 524
L HDGR T IK DSV D+ I I G
Sbjct: 123 EGKTMVKGGRIQLHFHDGRNLITTLEAGKQIKTFDSVLYDLRNKAIKAHIPLKLG 177
>UniRef50_A1RWS3 Cluster: Ribosomal protein S4E, central; n=1;
Thermofilum pendens Hrk 5|Rep: Ribosomal protein S4E,
central - Thermofilum pendens (strain Hrk 5)
Length = 251
Score = 106 bits (254), Expect = 4e-22
Identities = 61/185 (32%), Positives = 94/185 (50%), Gaps = 8/185 (4%)
Frame = +3
Query: 9 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 188
+HL+R AP W + + V+ +PS GPH L +P+ I LR+ YA T E +I+
Sbjct: 10 RHLRRSVAPPFWPIKRKEYVWTVKPSPGPHSLLSSIPIGIVLRDVFGYAKTMKEARRILA 69
Query: 189 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 368
R+I+VDG+V TD +P G MDV+ I + +R++ D + I PEEA YKL ++
Sbjct: 70 SRVIEVDGRVVTDYKFPVGLMDVLHIIPEEKYYRVVPDPARKLRFVEIKPEEAGYKLAQI 129
Query: 369 RRVATGPKSVPYLVTHDGRTL-------RYPDPL-IKVNDSVQLDISTNKIMDFIKFDSG 524
RR T HDGR + Y + K D++ + I I+ + F+ G
Sbjct: 130 RRKMTVKNGDLQFTLHDGRNVLIRKGSEAYSTAISYKTYDALLITIPRQSIVSHVPFEVG 189
Query: 525 NLCMI 539
L ++
Sbjct: 190 TLAIV 194
>UniRef50_Q9YF85 Cluster: 30S ribosomal protein S4e; n=4;
Desulfurococcales|Rep: 30S ribosomal protein S4e -
Aeropyrum pernix
Length = 253
Score = 104 bits (249), Expect = 2e-21
Identities = 63/187 (33%), Positives = 96/187 (51%), Gaps = 9/187 (4%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
++ LK L AP+ W + + +A +P GPH + LPL++ +RN L YA T E K++
Sbjct: 7 QRRLKALAAPRFWPILRKEYKWAVKPRPGPHPAEKSLPLLLIVRNVLGYAQTAREARKLI 66
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLI-YDVKGRFTIHRITPEEAKYKLC 362
+ +VDG VR D +P GFMDV+ + T E FR++ Y VK F +H I EE K
Sbjct: 67 SEGHFRVDGVVRKDYKFPVGFMDVIEVVDTGEKFRMLPYPVK-FFKLHPIPEEEGDLKPV 125
Query: 363 KVRRVATGPKSVPYLVTHDGRTL--RYPDP------LIKVNDSVQLDISTNKIMDFIKFD 518
++ T L HDGR + R DP + + D++ + + +I IKF
Sbjct: 126 RIENKTTVKGGHVQLNLHDGRNILVRVKDPRNPVEDVYRTMDTLLITVPGQEIKGHIKFG 185
Query: 519 SGNLCMI 539
G + +I
Sbjct: 186 EGAIAII 192
>UniRef50_A3H986 Cluster: Ribosomal protein S4E; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S4E -
Caldivirga maquilingensis IC-167
Length = 237
Score = 101 bits (241), Expect = 1e-20
Identities = 55/168 (32%), Positives = 85/168 (50%), Gaps = 3/168 (1%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
HL+R +P+ W +++ G ++ +PS GPH +PL + LR+ YA T E I+ +
Sbjct: 3 HLRRSTSPEWWPVERKGAPWSIKPSPGPHPANSSIPLAVLLRDVFHYAKTLREARLIIGK 62
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+KVDGKVR D YP G MDV+ + NE +R+I D RI EA K+C++
Sbjct: 63 GYVKVDGKVRRDYKYPVGLMDVIELTPINEYYRIIPDPVNFLRPIRIDKSEAGVKVCRIE 122
Query: 372 RVATGPKSVPYLVTHDGRTL---RYPDPLIKVNDSVQLDISTNKIMDF 506
L HDGR + + + SV +++ K+MD+
Sbjct: 123 DKTMVKAGKIQLNLHDGRNIIVDQDEGRKYETLGSVVVNLEDGKLMDY 170
>UniRef50_Q0W1X6 Cluster: 30S ribosomal protein S4E; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S4E -
Uncultured methanogenic archaeon RC-I
Length = 234
Score = 98.3 bits (234), Expect = 1e-19
Identities = 57/176 (32%), Positives = 87/176 (49%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
HLKR+ AP+ W + + + +P G H +PLV+ LR+ LK A +E+ KI+ +
Sbjct: 5 HLKRVAAPRTWPITRKTSKWVAKPMPGAHSEERGMPLVVVLRDLLKVADNTSEIKKILHE 64
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+ VDGKVR D Y G D +SI N +R++ + G+F H + +A K+CK+
Sbjct: 65 GKVLVDGKVRKDYRYTVGMFDTISIPAINANYRVVIGMDGKF--HLVPVTDASAKICKIV 122
Query: 372 RVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
L HDG T+ + K DSV L + KI + G+L M+
Sbjct: 123 NKTALRGGKIQLNLHDGTTMIASND-YKTKDSVILKMPERKIDQHFTYAVGSLVMV 177
>UniRef50_Q8PV38 Cluster: 30S ribosomal protein S4e; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S4e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 235
Score = 97.5 bits (232), Expect = 2e-19
Identities = 53/176 (30%), Positives = 87/176 (49%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
H KRL+ PK+W + + G + GPH LPL + +R+ LK E +I+ +
Sbjct: 3 HQKRLSVPKSWKVGRKGNKWISTTRPGPHSQARSLPLGLIIRDVLKLVDNNREGKRILSE 62
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+ VDG R D +P G DV+++ NE +R++ D KGR ++++ E KLC++
Sbjct: 63 GKVLVDGISRKDLRFPVGLFDVITLPLVNEAYRMLQDEKGRLVLYKLN-ETNVNKLCRIN 121
Query: 372 RVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
T L +DG + + DS+ L I ++ +KF+ GNL M+
Sbjct: 122 NKTTVKGGKIQLNLNDGTNILGSND-YGTKDSLILSIPDKHVVKHLKFEVGNLAMV 176
>UniRef50_Q40941 Cluster: 40S ribosomal protein S4; n=2;
Bigelowiella natans|Rep: 40S ribosomal protein S4 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 242
Score = 93.1 bits (221), Expect = 4e-18
Identities = 49/178 (27%), Positives = 89/178 (50%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIV 185
+KH KR+++ K G++ + S+GPH + + L+ ++ A E K+V
Sbjct: 6 KKHQKRISSNTMIKYKKKLGIFNTKISSGPHSKVKSVSLLNIIKKFFHLADNNQEAQKVV 65
Query: 186 KQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK 365
K + V+GK +P MD +S N+ +R++ G+ T++ I E K+CK
Sbjct: 66 KTGFLYVNGKKCLSHKFPISLMDTISFPLANKHYRVLLSKAGKLTVYEINQNEKDLKICK 125
Query: 366 VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
V ++ ++T D R L+ IKV DS+ + ++I+ +KF+ G+LC+I
Sbjct: 126 VIKIINASSKNKIIITDDLRELKINYAKIKVEDSLLIKTINDEIVYALKFEVGSLCLI 183
>UniRef50_Q56230 Cluster: 30S ribosomal protein S4e; n=3;
Thermoplasma|Rep: 30S ribosomal protein S4e -
Thermoplasma acidophilum
Length = 235
Score = 93.1 bits (221), Expect = 4e-18
Identities = 56/174 (32%), Positives = 84/174 (48%)
Frame = +3
Query: 18 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 197
KRL + + + + P P+ G H + + L+ +R+ LK + E +I+ L
Sbjct: 6 KRLMVSRQVKIPRKTYFWGPTPNPGMHPKDQSVTLLSIIRDYLKLSDKEREAARILANGL 65
Query: 198 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 377
+KVDGK + + GFMDV+ I E +R++Y+ +G + + T E A KL KVR
Sbjct: 66 VKVDGKTVREKKFAVGFMDVIEIN--GESYRVVYNDQGALVLMKETKERASMKLLKVRSK 123
Query: 378 ATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
P + L THDGRT D KV D + + KI + IK GN I
Sbjct: 124 VIAPGNRIQLGTHDGRTFITDDKSKKVGDVWAVSVPDMKISEIIKMQPGNKAYI 177
>UniRef50_P62429 Cluster: 30S ribosomal protein S4e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S4e -
Nanoarchaeum equitans
Length = 234
Score = 91.5 bits (217), Expect = 1e-17
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Frame = +3
Query: 6 RKHLKRLNAPKAWMLD-KLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKI 182
++HL+ L P+ W + K G + +PS GPH +P+ ++LR+ L A EV +
Sbjct: 6 KRHLRSLAVPRTWPVPRKSRGYWIVKPSPGPHSKEFAMPIAVWLRDYLGLAENMREVRYL 65
Query: 183 VKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLC 362
+ + VDG+ D +P G DV++I + NE +R++ D +G+ + +I EEA K
Sbjct: 66 LNNGKVLVDGRPIKDYKFPVGLFDVLAIPEINEYYRVLLDERGKLYLKKIDKEEANIKYG 125
Query: 363 K-VRRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFD 518
K +R+V+ + Y +T DGRT D K + V +I KI + I +
Sbjct: 126 KIIRKVSVRGGKIQYTLT-DGRTF-LGDNSYKTHYGVVYEIPNFKIREVIPLE 176
>UniRef50_A3CT09 Cluster: Ribosomal protein S4E, central; n=3;
Methanomicrobiales|Rep: Ribosomal protein S4E, central -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 242
Score = 91.1 bits (216), Expect = 1e-17
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 5/182 (2%)
Frame = +3
Query: 9 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 188
K+LKRL AP +W + K + + + GPH LP+ ++LR + A +EV KI+
Sbjct: 3 KYLKRLVAPGSWHIPKKVQKFVMKTAPGPHNAG-ALPVGVWLREHIGLAQNASEVKKILH 61
Query: 189 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 368
QR + V+G+ D G D+VSI K + +R+ DVKG I E AK +LCK+
Sbjct: 62 QRDVLVNGRACKDSRMGLGVFDIVSIPKLGKHYRIQLDVKGNLVAIEIPAESAKTRLCKI 121
Query: 369 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTN-----KIMDFIKFDSGNLC 533
R T L G + D K DSV + + T+ +I+D + GN+
Sbjct: 122 RNKTTVKGGKVQLNFAFGANV-LADNTYKAKDSVVVTLGTDGEDRFRIVDHFPYAEGNVA 180
Query: 534 MI 539
MI
Sbjct: 181 MI 182
>UniRef50_Q12ZT9 Cluster: Ribosomal protein S4E; n=1;
Methanococcoides burtonii DSM 6242|Rep: Ribosomal
protein S4E - Methanococcoides burtonii (strain DSM
6242)
Length = 236
Score = 90.6 bits (215), Expect = 2e-17
Identities = 48/176 (27%), Positives = 86/176 (48%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
H KR++ PK+W + K + GPH + +PL + LR+ L E +++ +
Sbjct: 4 HQKRISVPKSWQISKKSNKWITSTRPGPHNRLQSIPLAVILRDMLGVVDNRAEAKRVLSE 63
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+ VDG R D +P G MD+++I N +R++ D K R ++++ A KLC++
Sbjct: 64 GNVLVDGVARKDLRFPVGLMDIITIPLNNVEYRVMLDGKSRLVLNKLDGTGAD-KLCRIE 122
Query: 372 RVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
+ + + +DG + DS+ L + K++ IK++ GNL MI
Sbjct: 123 GKTSIKEGKIQMRLNDGVNI-IGSNNYNTKDSIILSVPDKKVVKHIKYEVGNLAMI 177
>UniRef50_Q673R6 Cluster: Ribosomal protein S4; n=2; environmental
samples|Rep: Ribosomal protein S4 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 232
Score = 89.4 bits (212), Expect = 5e-17
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 1/172 (0%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
H+KRL P++W L + ++ +P+ G H C+PL + LR+ L A E +++
Sbjct: 5 HMKRLTMPRSWPLTRKTDIWVQKPNPGGHSDEMCMPLGVILRDVLDLAHNLREAKRMLAT 64
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
R + VDG++ TD G MDV+++ + + FR I DV G+ I+ + A KLC+V
Sbjct: 65 RQVLVDGRIETDLGRGVGLMDVLTVGE--DSFRCILDVNGKLRYRSISDKAAASKLCRVM 122
Query: 372 RVATGPKSVPYLVTHDGRTLRYPD-PLIKVNDSVQLDISTNKIMDFIKFDSG 524
+T + HDGR + D L D++ + + + F G
Sbjct: 123 GKSTITDGKTQIHLHDGRNILVSDAKLYDSGDTLVISLPDQSVAGHHPFSKG 174
>UniRef50_O05634 Cluster: 30S ribosomal protein S4e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S4e -
Sulfolobus acidocaldarius
Length = 244
Score = 85.4 bits (202), Expect = 7e-16
Identities = 51/140 (36%), Positives = 68/140 (48%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
H+ R AP + K + R GPHK++E +PL I L+ LK T E +I+
Sbjct: 3 HITRFEAPWFLKVGKKEYKWIIRSRAGPHKIQESVPLAILLKYYLKAVDTTREAKRIIFD 62
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+ VDGKVR D YP G MDVV I + R+I D T I+ E+AKYK ++
Sbjct: 63 GKVLVDGKVRRDYKYPVGLMDVVEIPSADLRVRIIPDNVRYLTTINISREDAKYKFVRIM 122
Query: 372 RVATGPKSVPYLVTHDGRTL 431
T V L DGR +
Sbjct: 123 NKTTLKSGVLQLNLEDGRNI 142
>UniRef50_UPI000038E22A Cluster: hypothetical protein Faci_03001139;
n=1; Ferroplasma acidarmanus fer1|Rep: hypothetical
protein Faci_03001139 - Ferroplasma acidarmanus fer1
Length = 241
Score = 82.2 bits (194), Expect = 7e-15
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 1/175 (0%)
Frame = +3
Query: 18 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 197
K + A + + + ++ P+ H + +P++I LR+ LK E+ +I+ +
Sbjct: 7 KIMMASRKLKIPRKTNFWSVTPTPATHSKEDSIPMLIALRDYLKLGDKEREITRILNNNM 66
Query: 198 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCK-VRR 374
+KVDG++ D +P GFMDV+SI+ + ++YD KG+ I + P KL K V++
Sbjct: 67 VKVDGRIVKDRRFPVGFMDVLSIDTLENDYIIVYDRKGKLVIRQNAPGNKGLKLFKVVKK 126
Query: 375 VATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
G + L HDG+T+ I +D + + I +I + +K G+ I
Sbjct: 127 TIIGTGKI-QLGFHDGKTIVTDRKDINTSDVLLMKIPDLEIENVLKIAEGDKVFI 180
>UniRef50_A2SPL4 Cluster: Ribosomal protein S4E, central; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S4E, central - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 239
Score = 77.8 bits (183), Expect = 1e-13
Identities = 40/122 (32%), Positives = 66/122 (54%)
Frame = +3
Query: 18 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 197
KR+ AP AW + + Y S+GPH LP+ I+LR+ +++AL EV KI+ R
Sbjct: 5 KRMTAPDAWQIARKESKYVVSTSSGPHD-GSALPIGIWLRDHMQFALNTKEVRKILHDRQ 63
Query: 198 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 377
+ ++G + TD D++S K ++ + ++ D KGR + I+ + AK +L KV
Sbjct: 64 VLLNGHIVTDEHIGIDVFDIISFPKIDKHYMILVDEKGRHNEYEISADAAKLQLVKVANK 123
Query: 378 AT 383
T
Sbjct: 124 TT 125
>UniRef50_P22510 Cluster: 30S ribosomal protein S4E; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S4E -
Haloarcula marismortui (Halobacterium marismortui)
Length = 234
Score = 74.1 bits (174), Expect = 2e-12
Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Frame = +3
Query: 12 HLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQ 191
H KRL+ P +W +++ + + GPH +PL+I LR+ L YA E + +
Sbjct: 4 HQKRLSVPNSWPVERKTATFTVKAGAGPHG-ESGVPLLIVLRDVLGYADNRKEARYALNE 62
Query: 192 RLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVR 371
+ ++GK +D P G D+++ + E +R+ GR + I P+ A+ KL K+
Sbjct: 63 DNVLINGKAISDEERPVGMFDILAFTEREEYYRVFPGEGGRLALTAIDPDAAQSKLGKIV 122
Query: 372 RVATGPKSVPYLVTHDGRTLRY-PDPLIKVNDSVQLDISTNKIMDFIKFDSGNL 530
L HDG TL D DS+ + +++ +++ G L
Sbjct: 123 TKTHVSGGDVQLGLHDGETLIVEDDQTYDAGDSIVVGNEDGEVVAHFEYEEGAL 176
>UniRef50_Q6L1B5 Cluster: 30S ribosomal protein S4e; n=1;
Picrophilus torridus|Rep: 30S ribosomal protein S4e -
Picrophilus torridus
Length = 234
Score = 73.3 bits (172), Expect = 3e-12
Identities = 53/174 (30%), Positives = 80/174 (45%)
Frame = +3
Query: 18 KRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRL 197
K + AP+ + + +A G HK +PL+I LR+ LK E+ +I+ L
Sbjct: 6 KIMMAPRKLKIARKSRFWAVNSLPGSHKKDSSIPLLIALRDYLKLGDKEREITRILTNSL 65
Query: 198 IKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 377
+ VDGKV + GFMD +++ + L + YD KG+ I E KL +V+
Sbjct: 66 VMVDGKVVKERRRGIGFMDTLTVSGNDYL--VSYDRKGKLVILPKPGETKGLKLLRVKGK 123
Query: 378 ATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
+ HDG T+ IK DSV + I +I+D +KF GN I
Sbjct: 124 TYVKGGRIQISFHDGSTMVTDRKDIKNGDSVLVKIPKKEIVDVLKFAPGNRVFI 177
>UniRef50_A0RVY5 Cluster: Ribosomal protein S4E; n=2;
Thermoprotei|Rep: Ribosomal protein S4E - Cenarchaeum
symbiosum
Length = 238
Score = 71.3 bits (167), Expect = 1e-11
Identities = 46/172 (26%), Positives = 74/172 (43%)
Frame = +3
Query: 9 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 188
K LKR AP W + + G + G H +P + LR+ L T E K +
Sbjct: 8 KKLKRQMAPSFWGITRKGKRFVVTVHPGAHSKHRSIPSAVLLRDTLGAVSTLREAKKSIY 67
Query: 189 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 368
++VDG RT + G MDVV + T +++R++ +I E K+C+V
Sbjct: 68 SGNVEVDGVKRTSLHHGIGLMDVVELGGTGDIYRMVPSGGAILKPVKIEAAEKDRKICRV 127
Query: 369 RRVATGPKSVPYLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSG 524
+ + HDGR+L D + V DS + + KI+ + + G
Sbjct: 128 TSKTSISGGRTQIGFHDGRSL-ISDEKVSVGDSCLVQVPGQKILKVARMEKG 178
>UniRef50_Q00TF1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 197
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/96 (39%), Positives = 48/96 (50%)
Frame = -3
Query: 539 DHAEVAGVELDEVHDLVGGDVELHRVVHLDXXXXXXXXXXXXRHQVRHALGAGRDAPHLA 360
DHA+ A VELD + DLV DV+ + V LD + RHAL APHLA
Sbjct: 98 DHAQSADVELDRIGDLVRRDVDHNGVTLLDHGIRVTNGAAVVQTDARHALVPELLAPHLA 157
Query: 359 QLVLGFFRCDTVDSEPSFHIIY*TE*LICFLNGYNV 252
QLVL F D V +E S ++ E I +G +V
Sbjct: 158 QLVLRFDSLDAVHNESSLGVVDEPEVFIALFDGDDV 193
>UniRef50_Q6Y3G3 Cluster: RecA; n=2; Desulfuromonadales|Rep: RecA -
Geobacter chapelleii
Length = 171
Score = 41.9 bits (94), Expect = 0.009
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 344 SQVQAVQGAARRDRPQERAVP-GDARRAHAPVPGPAHQG-ERLGAARHLHQQDHGLHQVR 517
S++ GA R+R ++ +P G A H P P AH+ +++ RHLHQ D +
Sbjct: 19 SRLGRCPGAPGRNRGRDGRLPHGTAGPPHVPSPAQAHRHHQQIQLLRHLHQPDPHEDRRH 78
Query: 518 LRQPLHDH 541
+RQP +DH
Sbjct: 79 VRQPRNDH 86
>UniRef50_A0BHK0 Cluster: Chromosome undetermined scaffold_108,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 246
Score = 40.3 bits (90), Expect = 0.028
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 84 STGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVS 263
+T P +L + + L + ++ K L E L I KQ+ +KV+ K + DPT+P D S
Sbjct: 100 NTQPRELLKVVNLDPKIMDKEKKKL--EEELDINKQQKVKVEHKKQLDPTFPRNDFDKFS 157
Query: 264 IEKTNELFRLIYDVKG 311
IE +++ L+ + KG
Sbjct: 158 IEDMDQVLNLLSNYKG 173
>UniRef50_Q3WHX0 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 643
Score = 35.1 bits (77), Expect = 1.0
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Frame = +2
Query: 371 ARRDRPQERAVPGDARRAH----APVPGPAHQGERLGAARHLHQQDHGLHQVRLRQP 529
ARR R R +P RRAH PVPG H+ R R H HQ R +P
Sbjct: 157 ARRGRADRRRLPHRPRRAHRARTRPVPGRGHRRVRRRPRRRRHPHPRYRHQRRRLRP 213
>UniRef50_A5NNX2 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 105
Score = 34.7 bits (76), Expect = 1.4
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPG 442
G RRDRPQER P RRA P+ G
Sbjct: 70 GGDRRDRPQERLAPRSLRRAERPLTG 95
>UniRef50_UPI0000F32FE2 Cluster: UPI0000F32FE2 related cluster; n=1;
Bos taurus|Rep: UPI0000F32FE2 UniRef100 entry - Bos
Taurus
Length = 706
Score = 34.3 bits (75), Expect = 1.8
Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +2
Query: 308 RKVHYPPYHT*RSQVQAVQGAAR-RDRPQERAVPGDARRAHAPVPGP---AHQGER 463
R V PP H + VQG R RP+ R G A RA P PGP H+G R
Sbjct: 140 RTVWMPPCHPASRRGDPVQGLPHPRPRPRSRRA-GPAHRARGPAPGPPPRPHRGTR 194
>UniRef50_Q9AAE0 Cluster: ISCc2, transposase, fusion; n=1;
Caulobacter vibrioides|Rep: ISCc2, transposase, fusion -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 841
Score = 34.3 bits (75), Expect = 1.8
Identities = 22/55 (40%), Positives = 25/55 (45%)
Frame = +2
Query: 347 QVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQ 511
Q A QGA R Q+R V ARRA A V GE++ R H D HQ
Sbjct: 600 QASAAQGAIARQHAQQRLV---ARRADAKVDHAGRGGEQVVLRRQAHAHDIAGHQ 651
>UniRef50_A3BE82 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 247
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +2
Query: 341 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRL 520
R+ +++ + R R RA G+A R H PVP + RH H G ++RL
Sbjct: 100 RAPLRSRRARLLRRREDRRAAAGEAHRVHHPVPDHRERAPPHRVPRH-HPDGQGRRRLRL 158
Query: 521 RQ 526
R+
Sbjct: 159 RR 160
>UniRef50_A6GEF6 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Hydrolase,
alpha/beta fold family protein - Plesiocystis pacifica
SIR-1
Length = 310
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +3
Query: 42 WMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 221
W +D LGG+ K+R LP+ +F ++ G V +V + ++ G R
Sbjct: 216 WWVDFLGGLIELGDDAKLRKIRADLPIYVFAGDQDPVGAQGKNVRALVDR--LRATGHAR 273
Query: 222 TDPT-YPAGFMDVVSIEKTNELFRLIYDVKG 311
T YP G ++++ + +++ R + D G
Sbjct: 274 VKQTLYPGGRHEMINERERDQVTRELIDWLG 304
>UniRef50_Q4T5C4 Cluster: Chromosome undetermined SCAF9327, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9327,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1541
Score = 33.5 bits (73), Expect = 3.2
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = -1
Query: 472 CTESFTLMSGSGYRSVRPSCVTRYGTLLGPVA--TRRTLHSLYLASSGVIRWIVNLPFTS 299
C+ F +S Y V PS +R GPV+ TR T+ +L + + I+N
Sbjct: 523 CSAEFRTLSSQTYSFVSPS-FSRVHPEKGPVSGGTRLTVTGRHLDAGSSVSCIINKEECL 581
Query: 298 YIKRNNSFVFSMDTTSINPAG 236
++KR N + + S++ +G
Sbjct: 582 FVKRTNREIICITPASLSGSG 602
>UniRef50_Q8S3P7 Cluster: Putative uncharacterized protein 24K23.10;
n=1; Oryza sativa (japonica cultivar-group)|Rep:
Putative uncharacterized protein 24K23.10 - Oryza sativa
subsp. japonica (Rice)
Length = 130
Score = 33.1 bits (72), Expect = 4.2
Identities = 28/89 (31%), Positives = 40/89 (44%)
Frame = -1
Query: 484 EMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLYLASSGVIRWIVNLPF 305
++S C + F+ G GYR++ S VT G LGPV TRR S G R +P
Sbjct: 4 DVSRC-QGFSNRWGRGYRALAVSTVTARG--LGPVGTRRFSSSTRSPPPGRHRCPSPMPT 60
Query: 304 TSYIKRNNSFVFSMDTTSINPAGYVGSVR 218
+ +N+ + TT+ GS R
Sbjct: 61 SPATTTSNALLGLTTTTAAAALAGAGSGR 89
>UniRef50_Q6P3E2 Cluster: Immediate early response 5-like; n=2;
Eutheria|Rep: Immediate early response 5-like - Homo
sapiens (Human)
Length = 237
Score = 33.1 bits (72), Expect = 4.2
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +2
Query: 461 RLGAARHLHQQDHGLHQVRLRQPLHDH 541
R AARH Q H LHQ+ L+Q LH H
Sbjct: 103 RESAARHQLHQLHQLHQLHLQQQLHQH 129
>UniRef50_UPI0000D9F43D Cluster: PREDICTED: hypothetical protein;
n=3; Eutheria|Rep: PREDICTED: hypothetical protein -
Macaca mulatta
Length = 487
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 8/39 (20%)
Frame = +2
Query: 365 GAARRDR-----PQER---AVPGDARRAHAPVPGPAHQG 457
G+ARRDR P R + PG ARR H PGPA +G
Sbjct: 270 GSARRDRSSAPGPARRGRDSAPGPARRGHTSAPGPALRG 308
Score = 31.9 bits (69), Expect = 9.7
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 341 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQG--ERLGAARHLHQQDHG 502
R ++ G ARR R + PG ARR + PGPA +G G AR H G
Sbjct: 251 RLSPESAPGPARRGRA---SAPGSARRDRSSAPGPARRGRDSAPGPARRGHTSAPG 303
>UniRef50_UPI0000D5573E Cluster: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1);
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
Tyrosine-protein phosphatase non-receptor type 13
(Protein-tyrosine phosphatase 1E) (PTP-E1) (hPTPE1)
(PTP-BAS) (Protein-tyrosine phosphatase PTPL1)
(Fas-associated protein-tyrosine phosphatase 1) (FAP-1)
- Tribolium castaneum
Length = 768
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 405 LVTHDGRTLRYPDPLIKVNDSVQLDISTNKIMDFIKFDSGNLCMI 539
+ DGR L+ D +IKVND +ST +I+D ++ G +C++
Sbjct: 708 VAARDGR-LKPGDRVIKVNDESVEHLSTTEIIDLLRIVRGPVCIV 751
>UniRef50_UPI000023E164 Cluster: hypothetical protein FG03308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG03308.1 - Gibberella zeae PH-1
Length = 295
Score = 32.7 bits (71), Expect = 5.6
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 383 RPQERAVPGDARRAHAPVPGPAH-QGERLGAARHLHQQDHGLHQ 511
RPQ++A G R AHA PGP R +H+ Q H HQ
Sbjct: 69 RPQQQAKSGGPRLAHATKPGPPKGHTSRPQHVQHVQQIQHVHHQ 112
>UniRef50_Q03C76 Cluster: Predicted membrane protein; n=1;
Lactobacillus casei ATCC 334|Rep: Predicted membrane
protein - Lactobacillus casei (strain ATCC 334)
Length = 981
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 229 GSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSL 98
GS TFP L + + I+ LP+S + FR ITSG S ++
Sbjct: 891 GSGGTFPMELTNQFYNIIHPFLPMSYSIMNFRNAITSGIASNTV 934
>UniRef50_A5ZHX4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides caccae ATCC 43185|Rep: Putative
uncharacterized protein - Bacteroides caccae ATCC 43185
Length = 189
Score = 32.7 bits (71), Expect = 5.6
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 364 LHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCF 185
LH LYLA + W IK F+ TS+ Y + +P L R
Sbjct: 110 LHDLYLADIHIANWGRKFAERECIKSEQLFISRQFKTSLE--RYQDLIADYPDILQRVPL 167
Query: 184 TILSTSLPVS-AYLSRFRRKI 125
I+++ L +S LSR R KI
Sbjct: 168 GIIASYLGISQVSLSRIRAKI 188
>UniRef50_A5NUY4 Cluster: Phosphoribosylformylglycinamidine
synthase; n=1; Methylobacterium sp. 4-46|Rep:
Phosphoribosylformylglycinamidine synthase -
Methylobacterium sp. 4-46
Length = 819
Score = 32.7 bits (71), Expect = 5.6
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 395 RAVPGDARRAHAPVPG---PAHQGERLGAARHLHQQDHGLHQVRLRQ 526
R PGDARR+ A G P + LGA R LH + HG R R+
Sbjct: 451 RPGPGDARRSPAEADGLARPRLEALGLGAVRPLHPRQHGPEAGRRRR 497
>UniRef50_A0VDJ9 Cluster: PE-PGRS family protein; n=1; Delftia
acidovorans SPH-1|Rep: PE-PGRS family protein - Delftia
acidovorans SPH-1
Length = 201
Score = 32.7 bits (71), Expect = 5.6
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 371 ARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 493
A+R R Q RA P AR P PGP H+G R GAA LH+Q
Sbjct: 45 AQRARRQ-RAHPPPARAG--PGPGPGHRG-RAGAAAALHRQ 81
>UniRef50_A0A7M3 Cluster: Putative uncharacterized protein; n=1;
Cyanophage Ma-LMM01|Rep: Putative uncharacterized
protein - Cyanophage Ma-LMM01
Length = 840
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Frame = +3
Query: 339 EEAKYKLCKVRRVATGPKSVP---YLVTHDGRTLRYPDPLIKVNDSVQLDISTNKIM 500
EE Y++ + TG +V Y + +DGR++ +P+P++ + L IS N+I+
Sbjct: 66 EEGWYRINPAQLTITGNTNVTLRIYRIDYDGRSILFPEPVVGQDGYPFLQISGNQIL 122
>UniRef50_Q0U2Z5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 654
Score = 32.7 bits (71), Expect = 5.6
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = -1
Query: 292 KRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGK 113
+R++ V S +T+ +P G + S P+ +R F LS S + ++T GK
Sbjct: 286 RRHDYDVQSTETSLSSPRGLLKSPIPPPTVTVRSEFPTLSRSRQQQSLTCLITVEVTEGK 345
Query: 112 HSRSLWGPVEGRGAYTPPSLSNIHALGAFKRFK 14
P + RG PP S A G+F R K
Sbjct: 346 WRAD---PEDMRGVAPPPVPSIASATGSFSRGK 375
>UniRef50_Q5UP36 Cluster: Cysteinyl-tRNA synthetase; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Cysteinyl-tRNA
synthetase - Mimivirus
Length = 509
Score = 32.7 bits (71), Expect = 5.6
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +3
Query: 45 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKV 206
+LDKLG +Y S+ HK+++ + ++I R++L+ ++ +K++L +
Sbjct: 421 LLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDI 474
>UniRef50_UPI0000E212EB Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 301
Score = 32.3 bits (70), Expect = 7.3
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 368 AARRDRPQERAV--PGDARRAHAPVPGPAHQGERLGAAR 478
AA R+RP+ER PGDAR A P P P G AR
Sbjct: 22 AAPRERPRERLGLDPGDARAAELPAPVPPPPCPPAGRAR 60
>UniRef50_UPI00003832B5 Cluster: hypothetical protein Magn03004581;
n=1; Magnetospirillum magnetotacticum MS-1|Rep:
hypothetical protein Magn03004581 - Magnetospirillum
magnetotacticum MS-1
Length = 372
Score = 32.3 bits (70), Expect = 7.3
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLHQVRLRQPLHDH 541
GA R R VPG R HA GP +GE + R L +H L +V + H
Sbjct: 128 GAPDRARAPRVGVPGGLDRRHAVRAGPGGRGEPVRDLR-LDHDEHALERVEALEEREQH 185
>UniRef50_Q81VL9 Cluster: Lipoprotein, putative; n=9; Bacillus
cereus group|Rep: Lipoprotein, putative - Bacillus
anthracis
Length = 254
Score = 32.3 bits (70), Expect = 7.3
Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Frame = +3
Query: 237 PAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITP-EEAKYKLCKVRRVATGPKSVPYLVT 413
P +D + +EK+ + ++L + +KG+ T +T +E + K+ + + Y++T
Sbjct: 150 PEVVLDKMKLEKSGDKYKLKFTLKGQETESMLTSMDETQKKMLQAQNAKIEEVDAEYIIT 209
Query: 414 HDGR-TLRYPDPLIKVNDSVQLDISTN-KIMDFIKFD 518
D + D ++ N + I TN K + KFD
Sbjct: 210 KDFKYESAKIDMIMSSNGKDKAHIITNAKYTSYEKFD 246
>UniRef50_Q3W7E3 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 344
Score = 32.3 bits (70), Expect = 7.3
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = +2
Query: 368 AARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLH 487
AAR Q RA PGD R + PGP G A +H
Sbjct: 18 AARDGHRQARATPGDHRSSSGSAPGPIRTGRERHYAEGVH 57
>UniRef50_Q1NH40 Cluster: TonB-dependent receptor; n=1; Sphingomonas
sp. SKA58|Rep: TonB-dependent receptor - Sphingomonas
sp. SKA58
Length = 810
Score = 32.3 bits (70), Expect = 7.3
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -1
Query: 409 TRYGTLLGPVATRRTLHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYV 230
T +G L P T + Y + S + VN T ++ F ++ D SIN GY+
Sbjct: 415 TDFGFNLAPANTNL---ATYKSESKALFAQVNYSLTERLRVTGGFRYTWDKRSINRMGYI 471
Query: 229 GSVRTFPSTLMR--RCFTILSTSL 164
G + F + + R T+ +T L
Sbjct: 472 GGIPGFSGSFVSNGRLITLPATGL 495
>UniRef50_Q095T8 Cluster: Radical SAM:Molybdenum cofactor synthesis
C-terminal; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Radical SAM:Molybdenum cofactor synthesis C-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 362
Score = 32.3 bits (70), Expect = 7.3
Identities = 21/50 (42%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQD--HGLH 508
G AR R +RA PG A G AH GE LGA L + GLH
Sbjct: 209 GRARSHRRADRAAPGLRPAAGGGARGGAHPGEHLGACALLARAGGARGLH 258
>UniRef50_Q381Q5 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 347
Score = 32.3 bits (70), Expect = 7.3
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = -1
Query: 391 LGPVATRRTLHSLYLASSGVIRWIVNLPFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTF 212
LG V L+ Y+ I LP + ++ N FV ++ S PAG G V
Sbjct: 166 LGVVMEECNLYGAYIPGHPHALLIAYLPHSPWVLLRNLFVSNLTKISECPAGGEGGVNKV 225
Query: 211 PSTLMRRCFTI 179
S ++RR I
Sbjct: 226 DSLVLRRTLVI 236
>UniRef50_Q5T953 Cluster: Immediate early response 5-like protein;
n=11; Eutheria|Rep: Immediate early response 5-like
protein - Homo sapiens (Human)
Length = 404
Score = 32.3 bits (70), Expect = 7.3
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2
Query: 470 AARHLHQQDHGLHQVRLRQPLHDH 541
AARH Q H LHQ+ L+Q LH H
Sbjct: 106 AARHQLHQLHQLHQLHLQQQLHQH 129
>UniRef50_Q2HBS5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1521
Score = 32.3 bits (70), Expect = 7.3
Identities = 20/63 (31%), Positives = 25/63 (39%)
Frame = +2
Query: 323 PPYHT*RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHG 502
P Y RS V+ DRPQE P R P PA +G L +H Q +
Sbjct: 24 PTYVDERSTSAPVEPPPASDRPQEHLFPDRTLRVDTDAPAPARRGSALS---DIHAQLYS 80
Query: 503 LHQ 511
H+
Sbjct: 81 PHR 83
>UniRef50_Q05223 Cluster: Major head protein Gp17; n=5;
Siphoviridae|Rep: Major head protein Gp17 -
Mycobacteriophage L5
Length = 326
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Frame = -1
Query: 277 FVFSMDTTSINPAGYVGSVRTFPSTLMRRCF---TILSTSLPVSAYLSRFRRKIT 122
FV S +T NPA Y+G++RT +T F I T P +L++ ++++
Sbjct: 104 FVASAETVRANPANYLGTMRTKVATAFAMAFDNAAINGTDSPFPTFLAQTTKEVS 158
>UniRef50_Q59046 Cluster: DNA topoisomerase 1; n=6;
Methanococcales|Rep: DNA topoisomerase 1 - Methanococcus
jannaschii
Length = 761
Score = 32.3 bits (70), Expect = 7.3
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 81 PSTGPHKLRECLPLVIFLRNRLK-YALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDV 257
P T KL + + + N +K + + G +I+K+ L V+GK + DP +PA +
Sbjct: 316 PRTSSQKLPKDRKYLEDILNIIKNHPVYGKWAERILKENLKPVEGK-KEDPAHPAIHIVD 374
Query: 258 VSIEKTNELFRLIYDVKGRFTI 323
+ E+ +E + IYD+ R T+
Sbjct: 375 IPKEELSEKEKEIYDLIARRTL 396
>UniRef50_Q95108 Cluster: Thioredoxin, mitochondrial precursor;
n=10; Euteleostomi|Rep: Thioredoxin, mitochondrial
precursor - Bos taurus (Bovine)
Length = 166
Score = 32.3 bits (70), Expect = 7.3
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -1
Query: 148 LSRFRRKITSGKHSRSLWGPVEGRGAYTP 62
L RF I SGK S+S W PV R TP
Sbjct: 7 LRRFLTSIISGKPSQSRWAPVASRALQTP 35
>UniRef50_UPI000155BD16 Cluster: PREDICTED: similar to Bone
morphogenetic protein 3 precursor (BMP-3) (Osteogenin)
(BMP-3A), partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Bone morphogenetic protein 3
precursor (BMP-3) (Osteogenin) (BMP-3A), partial -
Ornithorhynchus anatinus
Length = 323
Score = 31.9 bits (69), Expect = 9.7
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 VQAVQGAARRDRPQERAVPGDARRA--HAPVPGPAHQGERLGAARHLHQQDHGLHQVRLR 523
V ++ G R D P R +PG R A AP+PGP + G R L QD+ L +R
Sbjct: 102 VASLSGPERHD-PPHRHLPGPERHAPFQAPLPGPRRRRRSAGPGRPL--QDNELPGTEVR 158
>UniRef50_P49450-2 Cluster: Isoform 2 of P49450 ; n=5; Eutheria|Rep:
Isoform 2 of P49450 - Homo sapiens (Human)
Length = 114
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 493
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>UniRef50_Q88TN6 Cluster: Integral membrane protein; n=1;
Lactobacillus plantarum|Rep: Integral membrane protein -
Lactobacillus plantarum
Length = 1106
Score = 31.9 bits (69), Expect = 9.7
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = -1
Query: 229 GSVRTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPPSLS 50
GS TFP + + F + LP++ + FR+ +T G S W + T SL
Sbjct: 1019 GSGGTFPMEITNKFFNAIHPYLPLTYSIQAFRQALTGGWGSGIFWSSIVVLAGITIVSLG 1078
Query: 49 NIHALGAF 26
+ A F
Sbjct: 1079 LLWASMVF 1086
>UniRef50_Q7NUT1 Cluster: Invasion protein; n=1; Chromobacterium
violaceum|Rep: Invasion protein - Chromobacterium
violaceum
Length = 685
Score = 31.9 bits (69), Expect = 9.7
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 341 RSQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQDHGLH 508
RS ++A+ + P+E A G AR +P PGPA GE + D+ +H
Sbjct: 255 RSLLEALPPGPGQRAPEEPARDGPARPTPSPDPGPAGPGEAQRPQEIHYHIDNSIH 310
>UniRef50_Q3JN86 Cluster: Putative uncharacterized protein; n=2;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 769
Score = 31.9 bits (69), Expect = 9.7
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 374 RRDRPQERAVPGDARRAHAPVPG---PAHQGERLGAARHLH 487
RRDR + R G H P G PAHQ +R G ARH H
Sbjct: 603 RRDR-RSRDQSGRFADRHVPRVGRGRPAHQQDRFGGARHAH 642
>UniRef50_Q3VZN6 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 369
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 377 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQD 496
R +P+ RA GD R H V G GER+ H H++D
Sbjct: 257 RRQPEHRAGAGDDREGH--VSGDDGAGERVAGEAHHHEED 294
>UniRef50_A5NLZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 344
Score = 31.9 bits (69), Expect = 9.7
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +2
Query: 332 HT*RSQVQAVQGAARRDRPQERA---VPGD--ARRAHAPVPGPAHQGERLGAARHLHQQD 496
H R + +A AR RP+ +PG ARR HA PA G+R GAAR Q
Sbjct: 58 HELRGRTRAGDPDARAPRPRHGRRPRLPGQRGARRPHARPRPPAPGGDRGGAARGDRAQQ 117
Query: 497 HGLHQVRLRQP 529
+V QP
Sbjct: 118 PRRRKVHTSQP 128
>UniRef50_Q7XYP8 Cluster: Peptide deformylase; n=1; Bigelowiella
natans|Rep: Peptide deformylase - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 315
Score = 31.9 bits (69), Expect = 9.7
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +3
Query: 240 AGFMDVVSIEKTNELFRLIYDVKG--RFTIHRITPEEAKYKLCKVRRVATGPKSVPYLVT 413
+ F+ VV +++ R +VKG R + ++ E K KVR + TGP S +
Sbjct: 58 SSFLPVVPKHDNDDVPRHRRNVKGFGRRKMSKMLDEMNSLKREKVRSMGTGPSSTTASIQ 117
Query: 414 HDG--RTLRYPDPLIKVND 464
G ++YPDP ++ +
Sbjct: 118 WKGPLNVIKYPDPRLRTEN 136
>UniRef50_Q7SD09 Cluster: Putative uncharacterized protein
NCU08117.1; n=1; Neurospora crassa|Rep: Putative
uncharacterized protein NCU08117.1 - Neurospora crassa
Length = 675
Score = 31.9 bits (69), Expect = 9.7
Identities = 38/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
Frame = -1
Query: 487 VEMSSCTESFTLMSGSGYRSVRPSCVTRYGTLLGPVATRRTLHSLYLASSGVIRWIVNLP 308
V +SS T++F+ + SV S +RY LL T T H L+ S + N
Sbjct: 437 VVVSSLTKTFSGFADVMAGSVLLSPSSRYFPLLSSTLT--TTHHNALSPSDAAHLLSNS- 493
Query: 307 FTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCF-TILST--SLPVSAYLSRF 137
+SY+ R+N+ + + Y + P + R + +I ST S P +AY ++
Sbjct: 494 -SSYLARSNTHNLNAQKLASFLHTY-STTHQSPRVISRVLYPSIPSTTSSTPGTAYYEQY 551
Query: 136 RRKITSGKHSRSLWGPVEGRGAYTP 62
R T+ + + +EG ++TP
Sbjct: 552 MRSSTAPAPTGPPYDEMEGNDSFTP 576
>UniRef50_A6S3K5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 571
Score = 31.9 bits (69), Expect = 9.7
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1
Query: 310 PFTSYIKRNNSFVFSMDTTSINPAGYVGSVRTFPSTLMRRCFTILSTS 167
P +K +NS S+DTTS NP+ Y S T T+ + +I STS
Sbjct: 301 PTYESVKSSNSGCKSLDTTSYNPSAYKISDATTCETINEKETSISSTS 348
>UniRef50_Q5SW25 Cluster: POM121-like protein 2; n=3; Murinae|Rep:
POM121-like protein 2 - Mus musculus (Mouse)
Length = 972
Score = 31.9 bits (69), Expect = 9.7
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 247 NPAGYVGSV-RTFPSTLMRRCFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPV 86
NP +V R FP M+R + SLP + S +R I S +H R+ W PV
Sbjct: 66 NPTAFVSEAWRRFP---MKRPQNPIMGSLPSDWWESYLKRNIWSLRHPRATWSPV 117
>UniRef50_Q8N8D1 Cluster: Programmed cell death protein 7; n=13;
Theria|Rep: Programmed cell death protein 7 - Homo
sapiens (Human)
Length = 485
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/34 (50%), Positives = 17/34 (50%)
Frame = +2
Query: 377 RDRPQERAVPGDARRAHAPVPGPAHQGERLGAAR 478
RDR AV G RRA PVP H G LG R
Sbjct: 142 RDRQWLEAVFGTPRRAGCPVPQRTHAGPSLGEVR 175
>UniRef50_Q9H7Y0 Cluster: Uncharacterized protein CXorf36 precursor;
n=17; Amniota|Rep: Uncharacterized protein CXorf36
precursor - Homo sapiens (Human)
Length = 182
Score = 31.9 bits (69), Expect = 9.7
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 231 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVRRV 377
+YPA + D I + E+FRL+ + + RI + K C + RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>UniRef50_P49450 Cluster: Histone H3-like centromeric protein A;
n=9; Theria|Rep: Histone H3-like centromeric protein A -
Homo sapiens (Human)
Length = 140
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 365 GAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARHLHQQ 493
G RR R E P + P PGP+ +G LGA+ H H +
Sbjct: 2 GPRRRSRKPE--APRRRSPSPTPTPGPSRRGPSLGASSHQHSR 42
>UniRef50_Q9AAL4 Cluster: N-succinylarginine dihydrolase 1; n=9;
Alphaproteobacteria|Rep: N-succinylarginine dihydrolase
1 - Caulobacter crescentus (Caulobacter vibrioides)
Length = 426
Score = 31.9 bits (69), Expect = 9.7
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 395 RAVPGDARRAHAPVPGPAHQGERLGAARHLH-QQDHGLHQVRL 520
R G+A HAP+P AH G+ GAA H+ +HG V +
Sbjct: 150 RVFSGEAFAVHAPLPFAAHLGDE-GAANHMRLAANHGARGVNV 191
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 550,832,958
Number of Sequences: 1657284
Number of extensions: 11705747
Number of successful extensions: 43545
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 41523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43490
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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