BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C11
(541 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 25 2.1
AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein p... 25 2.1
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 5.0
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 5.0
EF426194-1|ABO26437.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426193-1|ABO26436.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426192-1|ABO26435.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426191-1|ABO26434.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426190-1|ABO26433.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426189-1|ABO26432.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426188-1|ABO26431.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426187-1|ABO26430.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426186-1|ABO26429.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426185-1|ABO26428.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426184-1|ABO26427.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426183-1|ABO26426.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426182-1|ABO26425.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426181-1|ABO26424.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426180-1|ABO26423.1| 133|Anopheles gambiae unknown protein. 23 6.5
EF426179-1|ABO26422.1| 133|Anopheles gambiae unknown protein. 23 6.5
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 6.5
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 23 6.5
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 8.7
EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calc... 23 8.7
EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein. 23 8.7
AY752901-1|AAV30075.1| 90|Anopheles gambiae peroxidase 7 protein. 23 8.7
AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport... 23 8.7
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 24.6 bits (51), Expect = 2.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +3
Query: 153 ALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSIEKTNE 281
++TG ++LK KQ+L +DG + ++ D+ I++ E
Sbjct: 575 SVTGTKLLKKTKQQLEPLDGTLGWRRSHRPSLHDISIIDEEEE 617
>AB090817-1|BAC57909.1| 344|Anopheles gambiae gag-like protein
protein.
Length = 344
Score = 24.6 bits (51), Expect = 2.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 250 WTLYPLRKQMSYSV*YMM*KEGSLSTVSHLKKPSTS--CARCGASRPAPRAC 399
W++ +R+ M Y K G S H ++P S C +CG S +AC
Sbjct: 263 WSICHIREVMEEQKCYKCWKVGHTSY--HCREPDRSNLCWKCGLSGHKKQAC 312
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 23.4 bits (48), Expect = 5.0
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 275 CFLNGYNVHKSRRVRGVSPHFPVHFDETLLHN 180
CFL+ N+H+ ++ GV H H+ + +L N
Sbjct: 192 CFLDVLNLHELYQLNGVHNH-SNHYLDLVLSN 222
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 377 RDRPQERAVPGDARRAHAPVPGPAHQGERLGA 472
+DRP A P ++ + +PG A + E + +
Sbjct: 584 KDRPNALASPASPLKSPSKIPGLARRPENISS 615
>EF426194-1|ABO26437.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426193-1|ABO26436.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426192-1|ABO26435.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426191-1|ABO26434.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426190-1|ABO26433.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426189-1|ABO26432.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426188-1|ABO26431.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426187-1|ABO26430.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426186-1|ABO26429.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426185-1|ABO26428.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426184-1|ABO26427.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426183-1|ABO26426.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426182-1|ABO26425.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426181-1|ABO26424.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426180-1|ABO26423.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>EF426179-1|ABO26422.1| 133|Anopheles gambiae unknown protein.
Length = 133
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
Frame = +1
Query: 34 LKHGCWTSWAACTR-RGPRRVP 96
L H C T WA C + P RVP
Sbjct: 62 LTHTCNTPWADCCKVDEPGRVP 83
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.0 bits (47), Expect = 6.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 405 GTARSWGRSRRAAPCTACTWLLQ 337
GT R GR+ R A CTA L+
Sbjct: 2223 GTFRGIGRNYRIAKCTAAKCALR 2245
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 23.0 bits (47), Expect = 6.5
Identities = 14/60 (23%), Positives = 23/60 (38%)
Frame = -1
Query: 190 CFTILSTSLPVSAYLSRFRRKITSGKHSRSLWGPVEGRGAYTPPSLSNIHALGAFKRFKC 11
C + + ++PVS R R + G +R PV+ + A +A KC
Sbjct: 373 CISSIMEAMPVSVDRQRCYRCLERGHLARDCQSPVDRQQACIRCGADGHYAKSCTSEIKC 432
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 22.6 bits (46), Expect = 8.7
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 92 SPQAARMLAA-SDLPAKSAQVRAHRQ*GA*DCEATSHQS-GRESAD*PHVPGGIYGRCIH 265
SP+ A+ AA + A+ + R +R+ +A ++ GRE AD P G+ R I
Sbjct: 1137 SPRTAQRRAALRERQARFRERRRNRRLLGMSGQAINNDDDGRERADLAAGPSGMRNRAID 1196
Query: 266 *ENK 277
EN+
Sbjct: 1197 EENE 1200
>EF990672-1|ABS30733.1| 466|Anopheles gambiae voltage-gated calcium
channel beta subunitprotein.
Length = 466
Score = 22.6 bits (46), Expect = 8.7
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +2
Query: 344 SQVQAVQGAARRDRPQERAVPGDARRAHAPVPGPAHQGERLGAARH 481
S++ +G++ VPG + P P + +GA+RH
Sbjct: 162 SKLYTSKGSSSSGNLGASGVPGAEPSRGSTPPTPGDDSDSMGASRH 207
>EF519370-1|ABP68479.1| 452|Anopheles gambiae LRIM1 protein.
Length = 452
Score = 22.6 bits (46), Expect = 8.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +3
Query: 261 SIEKTNELFRLIYDVKGRFTIHRI 332
S+E N + IYD+KG+ ++
Sbjct: 177 SLEHLNLQYNFIYDIKGQVVFAKL 200
>AY752901-1|AAV30075.1| 90|Anopheles gambiae peroxidase 7 protein.
Length = 90
Score = 22.6 bits (46), Expect = 8.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 73 AYTPPSLSNIHALGAFKRF 17
A+T PS+ N H AF+ F
Sbjct: 64 AFTNPSVINSHTTAAFRFF 82
>AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium
transport-like protein protein.
Length = 591
Score = 22.6 bits (46), Expect = 8.7
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 530 EVAGVELDEVHDLVGGDVELHRVVH 456
+V + +D +L+G D+ HR+ H
Sbjct: 424 KVVPIRMDPNEELLGADLMEHRIRH 448
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,699
Number of Sequences: 2352
Number of extensions: 12613
Number of successful extensions: 76
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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