Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C09
         (378 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    24   0.44 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    24   0.58 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   1.0  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   2.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   2.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   2.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.1  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   5.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    20   7.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    20   9.5  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +3

Query: 132 SKELRQKFNVKSMPIRKDDEVQLYETYKAAGGQSSTGVP 248
           +K +R K N+     +  +E  LY   KAAG    +G P
Sbjct: 283 NKRIRYKKNIG----KAQEEANLYAAKKAAGASPYSGTP 317


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.8 bits (49), Expect = 0.58
 Identities = 10/39 (25%), Positives = 18/39 (46%)
 Frame = +3

Query: 48  RDVVQKKNRKRHFSAPSHIRRVLMSAPLSKELRQKFNVK 164
           R ++Q++   RH +   + R    + P S    Q FN +
Sbjct: 271 RHLIQRRTHTRHTTTSHNTRGTPRTTPASSRCGQLFNTE 309


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -2

Query: 356 IFNFTITHFEGWI---PTYTLAPLAFSRWILSM*TTNFLRY 243
           +F+F +T F  WI     Y ++ ++ + + L   +T  L+Y
Sbjct: 38  VFSFAVTFFSAWICALVNYNVSEISENFYYLPAMSTGPLKY 78


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 86  QCPFSHPTSTYVSTTLQRVKTKVQREIYANPQRRRSAVVRD 208
           QCP  H   T      Q ++          P++ ++A V+D
Sbjct: 196 QCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKD 236


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 323 WIPTYTLAPLAFSR-WILSM*TTNFLRYTCTTLPTCCLISLVQLHFVVF 180
           ++  Y LA +  +  WI  M       YT   L   C++ +V LHF+ +
Sbjct: 142 YVILYILATVFLAYVWICEMGVVTLQAYT---LHLFCVLYVVLLHFLTY 187


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 323 WIPTYTLAPLAFSR-WILSM*TTNFLRYTCTTLPTCCLISLVQLHFVVF 180
           ++  Y LA +  +  WI  M       YT   L   C++ +V LHF+ +
Sbjct: 142 YVILYILATVFLAYVWICEMGVVTLQAYT---LHLFCVLYVVLLHFLTY 187


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 376  LFYGLYSSLTSQSHTLKGGYRRTHWLHW 293
            LF+GL   + +Q+  L  G  +   +HW
Sbjct: 1328 LFFGLNFLIITQAMFLVVGQLQASQIHW 1355


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 76  RGISVPLLTSDEYLCQHHSPKS*DKSS 156
           R ++VP+L  D   C    PK  D  S
Sbjct: 117 RRVAVPVLVRDGKPCLSGGPKHPDPGS 143


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 86  QCPFSHPTSTYVSTTLQ 136
           +CP + PT T +S +L+
Sbjct: 733 ECPKNRPTFTELSKSLE 749


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 208 VSYNCTSSSLRIGIDF 161
           V Y C+   L +GI F
Sbjct: 253 VDYGCSPKKLIVGIPF 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,894
Number of Sequences: 336
Number of extensions: 2094
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7803226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)