Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0010_C09
(378 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 96 4e-20
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 96 4e-20
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 95 5e-20
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 95 5e-20
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 95 5e-20
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 95 5e-20
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 95 5e-20
BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein pr... 29 5.0
BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe... 29 5.0
AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe... 29 5.0
AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein. 29 5.0
AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint p... 29 5.0
AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint p... 29 5.0
AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint p... 29 5.0
AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein. 29 5.0
AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein. 29 5.0
AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein. 29 5.0
AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolo... 29 5.0
AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein prot... 29 5.0
AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint p... 29 5.0
X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for ... 28 8.8
X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for ... 28 8.8
M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C m... 28 8.8
BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein. 28 8.8
BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein. 28 8.8
BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein. 28 8.8
BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein. 28 8.8
AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript va... 28 8.8
AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript va... 28 8.8
AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript va... 28 8.8
AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antige... 28 8.8
AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein. 28 8.8
AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein. 28 8.8
AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein. 28 8.8
AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein. 28 8.8
AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein. 28 8.8
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 95.9 bits (228), Expect = 4e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 95.9 bits (228), Expect = 4e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 95.5 bits (227), Expect = 5e-20
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Frame = +1
Query: 31 MKYNKLVTSSRRKTG-RGISVPLLTSDEYLCQHHSPKS*DKSST*NLCQSAKTTKCSCTR 207
MK+N VTS R K R + P + + SP S + N+ +S K +
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMS---SPLSKELRQKYNV-RSMPIRKDDEVQ 56
Query: 208 LIR-----QQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRK 372
++R QQ+GKVVQVYRKK+V+YIER+QREKANG +V+VGIHPSK VI +LK++KDRK
Sbjct: 57 VVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRK 116
Query: 373 TI 378
I
Sbjct: 117 KI 118
>BX537441-1|CAD97683.1| 670|Homo sapiens hypothetical protein
protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>BC032304-1|AAH32304.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AY612854-1|AAT09763.1| 670|Homo sapiens RAD17 homolog (S. pombe)
protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AJ131296-1|CAB46364.1| 670|Homo sapiens HRAD17 protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AJ004977-1|CAA06251.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AJ001642-1|CAA04894.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AF126424-1|AAD17334.1| 670|Homo sapiens cell cycle checkpoint
protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AF112263-1|AAD38878.1| 670|Homo sapiens hRad17 protein protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AF098534-1|AAC97951.1| 584|Homo sapiens RAD17 isoform 4 protein.
Length = 584
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 199 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 230
>AF098533-1|AAC97950.1| 505|Homo sapiens RAD17 isoform 3 protein.
Length = 505
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 120 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 151
>AF085736-1|AAC36334.1| 681|Homo sapiens RF-C/activator 1 homolog
protein.
Length = 681
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 296 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 327
>AF076838-1|AAC95520.1| 670|Homo sapiens Rad17-like protein
protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>AF017748-1|AAD01620.1| 670|Homo sapiens cell cycle checkpoint
protein RAD17 protein.
Length = 670
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 31 MKY-NKLVTSSRRKTGRGISVPLLTSDEYLCQ 123
MK+ N++VT K G I+VP TS E LCQ
Sbjct: 285 MKFLNRIVTIEANKNGGKITVPDKTSLELLCQ 316
>X03445-1|CAA27174.1| 572|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin C precursor. ).
Length = 572
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>X03444-1|CAA27173.1| 702|Homo sapiens protein ( Human mRNA for
nuclear envelope protein lamin A precursor. ).
Length = 702
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>M13451-1|AAA36164.1| 572|Homo sapiens protein ( Human lamin C
mRNA, complete cds. ).
Length = 572
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>BC033088-1|AAH33088.1| 465|Homo sapiens LMNA protein protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>BC014507-1|AAH14507.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>BC003162-1|AAH03162.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>BC000511-1|AAH00511.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AY847597-1|AAW32540.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AY847596-1|AAW32539.1| 480|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 480
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AY847595-1|AAW32538.1| 664|Homo sapiens lamin A/C transcript
variant 1 protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AY528714-1|ABB04050.1| 487|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.12 protein.
Length = 487
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AY357727-1|AAR29466.1| 614|Homo sapiens progerin protein.
Length = 614
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AL135927-4|CAI15522.1| 664|Homo sapiens lamin A/C protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AL135927-3|CAI15523.1| 614|Homo sapiens lamin A/C protein.
Length = 614
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AL135927-2|CAI15521.1| 572|Homo sapiens lamin A/C protein.
Length = 572
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
>AL135927-1|CAI15520.1| 465|Homo sapiens lamin A/C protein.
Length = 465
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +1
Query: 178 AKTTKCSCTRLIRQQVGKVVQVYRKKFVVYIERIQREKANGASVYVGIHPSKCVI 342
A +T S TR+ R Q + +Q + VYI+R++ + A + + I S+ V+
Sbjct: 16 ASSTPLSPTRITRLQEKEDLQELNDRLAVYIDRVRSLETENAGLRLRITESEEVV 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,518,521
Number of Sequences: 237096
Number of extensions: 1220014
Number of successful extensions: 2874
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2867
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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