Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C09
         (378 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    24   0.52 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   1.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   4.8  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   6.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   8.4  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 78  SSCFSSGRRHELIVLHSVVSSPKPSC 1
           S  F+SGR +    LH V SS + SC
Sbjct: 426 SQRFASGRYYSAYSLHHVRSSRESSC 451


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 15/51 (29%), Positives = 22/51 (43%)
 Frame = -3

Query: 292 LSHAGSFRCRLQTSYGTPVLLCPPAAL*VSYNCTSSSLRIGIDFTLNFCLN 140
           L ++GS      TSY    L C       + NC + SL +  +F   +C N
Sbjct: 63  LPYSGSKCTWTITSYHRINLKCSLVEFSENKNCNAGSLTVKKNFANKYCGN 113


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 242 TCTTLPTCCLISLVQLHFVVFADWHRFHVEL 150
           TC++ PT   IS   L F+       F ++L
Sbjct: 118 TCSSHPTAAFISYGTLFFIYVQPSATFSLDL 148


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 242 TCTTLPTCCLISLVQLHFVVFADWHRFHVEL 150
           TC++ PT   IS   L F+       F ++L
Sbjct: 119 TCSSHPTAAFISYGTLFFIYVHPSATFSLDL 149


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/36 (22%), Positives = 15/36 (41%)
 Frame = +2

Query: 74  EEAFQCPFSHPTSTYVSTTLQRVKTKVQREIYANPQ 181
           E+ ++C   H T     T    +KT     +  +P+
Sbjct: 257 EKVYKCTLCHETFGSKKTMELHIKTHSDSSVVGSPR 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,252
Number of Sequences: 438
Number of extensions: 2544
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9176370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)