Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0010_C08
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    25   0.30 
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   2.8  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   2.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   4.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.4  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   6.4  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.4  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    20   8.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    20   8.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    20   8.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    20   8.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.4  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 25.0 bits (52), Expect = 0.30
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +3

Query: 66  RYITFTRRSSLGQNLPMTEQR 128
           +YIT  R+S L +NL ++E++
Sbjct: 180 KYITIKRKSELAENLGLSERQ 200


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 60  KRRYITFTRRSSLGQNLPMTEQR 128
           + +Y+   RR  + QNL +TE++
Sbjct: 106 RSKYLCRPRRIQMAQNLNLTERQ 128


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +3

Query: 60  KRRYITFTRRSSLGQNLPMTEQR 128
           + +Y+   RR  + QNL +TE++
Sbjct: 126 RSKYLCRPRRIQMAQNLNLTERQ 148


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -2

Query: 320 SLPKWKLRRQFMRNGLRMLNQLH 252
           S  K KL  +   NG  MLN LH
Sbjct: 128 SFAKVKLTNKSNGNGQIMLNSLH 150


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 66  RYITFTRRSSLGQNLPMTEQR 128
           +Y+T  RR  + ++L +TE++
Sbjct: 206 KYLTRRRRIEIAESLRLTERQ 226


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 163 LNLTGPVFLCWGCTKCSR 216
           L  T P  L  GCTKC++
Sbjct: 62  LKKTLPDALSSGCTKCNQ 79


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 66  RYITFTRRSSLGQNLPMTEQR 128
           +Y+T  RR  + ++L +TE++
Sbjct: 206 KYLTRRRRIEIAESLRLTERQ 226


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = +3

Query: 66  RYITFTRRSSLGQNLPMTEQR 128
           +Y+T  RR  + ++L +TE++
Sbjct: 206 KYLTRRRRIEIAESLRLTERQ 226


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 306 PLWERRQPV 332
           P WER QPV
Sbjct: 73  PWWERYQPV 81


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 306 PLWERRQPV 332
           P WER QPV
Sbjct: 74  PWWERYQPV 82


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +3

Query: 306 PLWERRQPV 332
           P WER QPV
Sbjct: 74  PWWERYQPV 82


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 320 SLPKWKLRRQFMRNGLRMLNQ 258
           SLP  +L  +F+R+ + +L Q
Sbjct: 55  SLPNRRLHEEFLRSSVDVLLQ 75


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 87  RSSLGQNLPMTE 122
           R   GQN+P+TE
Sbjct: 325 RGDNGQNIPLTE 336


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -3

Query: 241 RFSTGTRCSCYIWYSPSTRRLGQSG 167
           +F+T     CY +YS S R +   G
Sbjct: 545 QFNTIVFAFCYCYYSISIRPISTLG 569


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = -3

Query: 136 CPCRCSVMGRFC 101
           C C+   MGR C
Sbjct: 324 CNCKLGFMGRHC 335


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,090
Number of Sequences: 336
Number of extensions: 1199
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)